; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013704 (gene) of Snake gourd v1 genome

Gene IDTan0013704
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNA ligase/cyclic nucleotide phosphodiesterase
Genome locationLG11:5301549..5303061
RNA-Seq ExpressionTan0013704
SyntenyTan0013704
Gene Ontology termsNA
InterPro domainsIPR009097 - Cyclic phosphodiesterase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142350.1 uncharacterized protein LOC101208638 [Cucumis sativus]4.2e-9598.91Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_022939795.1 uncharacterized protein LOC111445566 [Cucurbita moschata]9.3e-9597.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYR GSWIPHC+VAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_022964210.1 uncharacterized protein LOC111464296 [Cucurbita moschata]9.3e-9597.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSL+SIGSLP+DNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIE GEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT+EA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_022993671.1 uncharacterized protein LOC111489594 [Cucurbita maxima]4.2e-9598.36Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYR GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

XP_038890563.1 uncharacterized protein LOC120080080 [Benincasa hispida]4.2e-9598.36Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSD+NILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLC+AMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

TrEMBL top hitse value%identityAlignment
A0A0A0KVB2 Uncharacterized protein2.0e-9598.91Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A1S3C834 uncharacterized protein LOC1034980552.0e-9598.91Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A5A7T7Y4 RNA ligase/cyclic nucleotide phosphodiesterase2.0e-9598.91Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESIVKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A6J1FNR7 uncharacterized protein LOC1114455664.5e-9597.81Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYR GSWIPHC+VAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

A0A6J1JWZ6 uncharacterized protein LOC1114895942.0e-9598.36Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        FQSQLCEAMRKEGIEIGEEYR GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G28140.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein2.9e-7070.65Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLL
        MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS +  ++ TK+E I+K+F+SKQEP+ LS SSIGS  SD+N LFL P PS+SL+
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLL

Query:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
        Q Q QLCE ++KEG EIGEEYR+ SW+P C+VA +VPK+R++E F VLRDLKL V GYA+DIGLVEFSPVRE+FSF LGN +E+
Subjt:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

AT3G28140.2 RNA ligase/cyclic nucleotide phosphodiesterase family protein1.1e-5366.67Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLL
        MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS +  ++ TK+E I+K+F+SKQEP+ LS SSIGS  SD+N LFL P PS+SL+
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLL

Query:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKL
        Q Q QLCE ++KEG EIGEEYR+ SW+P C+VA +VPK+R++E F V     L
Subjt:  QFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKL

AT5G40190.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein2.3e-7571.04Show/hide
Query:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ
        MS+G+AIELYFDPALENQVLKAWNV ARRQIST+LI  ESRPHITLFS+ F + T++ES++KNF SKQEP+ +S S+IGS  SDNN+LFL P PS+SLLQ
Subjt:  MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQ

Query:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA
         Q+QLC+ ++KE ++IGEEYR+ SW+P C VA +VPK+RMAEAF VLRDLKLPV+GY ++IGLVEFSPVRE+FSF LGNT+E+
Subjt:  FQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACAAGGCTTTGCGATCGAGCTCTATTTTGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAACTCATCGA
AATTGAATCCCGCCCTCACATTACCCTGTTCTCCAGCCCTTTTCTCGAGCCTACAAAAGTTGAATCCATCGTTAAGAATTTCGCTTCTAAACAGGAACCCTTGCCTTTGT
CCTTATCGTCAATTGGCAGCCTTCCAAGTGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTCCTCCAATTCCAGTCCCAATTGTGCGAAGCAATGAGG
AAAGAAGGAATTGAAATCGGAGAGGAATATCGCCTTGGCTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAAGTGCCCAAGGCTCGAATGGCTGAGGCATTTTGTGTTCT
AAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGAGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTT
GA
mRNA sequenceShow/hide mRNA sequence
GTTGAAGAACAATTCGGTCGTTCAACGCTGGTTGGCTCGGTGGTTTAAGCGGGCCGGTCGATGCCCCTTCTCTCCCCCTTTCCTCTCTCTGTCTTCCTCGTTTCGATCCA
CTCGGAGGACACCTAATCTGGTTCGGCTCTTAGCAAGTGGCTTTTCATCTCCCTCAGTCTCTTGCAGAGCCTTTCCTTTGATCTCTCTTTCCATTTCCCACTCATAGCTT
CACTTCACCGCTTTACCTGTCTCTGTTCTTCCAGTTCTTCATCCCCTTTTCACCAACCTTCTGAAAACCTTGTCTTCAAATTTGTATTTTCCATTTCTCTTTCAGCTCTT
TCTCGCATTTTTTAGGTTTTTGGGCATCTGGGTCCATCGATTTCTTCTGGGTCTTTCTGTTTTCTTCTGTTTTTTTGTGTTGTATCTCTAGGGTTTTGAATTTCCCATTT
CAGATAGTTCTGATCTTCTCTTGTTTCCCGCTTTTCTTGTCTTGGAATTCGAAATTGACGTCTGGGTTTTGTTTATTTCTCCCTGTTTTTCACTAATTTAGTTCGAGGAT
TTTGAGTTCTAAGGCGATGTCACAAGGCTTTGCGATCGAGCTCTATTTTGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTA
GTACCCAACTCATCGAAATTGAATCCCGCCCTCACATTACCCTGTTCTCCAGCCCTTTTCTCGAGCCTACAAAAGTTGAATCCATCGTTAAGAATTTCGCTTCTAAACAG
GAACCCTTGCCTTTGTCCTTATCGTCAATTGGCAGCCTTCCAAGTGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTCCTCCAATTCCAGTCCCAATT
GTGCGAAGCAATGAGGAAAGAAGGAATTGAAATCGGAGAGGAATATCGCCTTGGCTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAAGTGCCCAAGGCTCGAATGGCTG
AGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGAGAGCTGTTCTCTTTTGTTCTTGGT
AACACTGTCGAAGCTTGAAGCTTTGACGCCATTATTGTGCTTTAATCTGATAGTTCTTCCCTGTGAACTTGTACAACCTTAAATTTATTGTAGCTGTTTTAGAGGTCCTA
TTTAGACGCAGGAGCATTACAAATAAGGATGCATTTTGTATTTTGTGTTATGAATTTGATCCTTTTTCATTTGTCTTCATATTAAAGTTGAATCTTACTTGTTAGTGCAT
TTAATAAACACATTTGATTTGATGATTAGTGAGTGAGGGGAAAAAACCTTCTGGGTTGGTTCACTTGGCTGAACTTGTTGTGGGTTCTTTGAAATGATTCTTGTCTTCAC
AATTTACATTGTAGATGATAACCTTTCATTGGTTCTTTTGAAATGAATGTTAAAGGTTTAGACCTTTCACATATAACTGCTCT
Protein sequenceShow/hide protein sequence
MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMR
KEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA