CuGenDBv2

Gene ID	Tan0013710
Organism	Trichosanthes anguina (Snake gourd v1)
Description	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
Genome location	LG07:29757537..29761173
RNA-Seq Expression	Tan0013710
Synteny	Tan0013710
Gene Ontology terms	GO:0016874 - ligase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605258.1 hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sororia]

5.7e-73

88.2

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Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF
        MSD  DTDSDAPEEFTAEQGIQQD+EIRKVQKES ARVVREGKERRR WAEKKTPR SKKGE VED AETP H+DQVSKLGMLPSNLVQLLA+REKQVF 
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF

Query:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK
        SDP DEKPA KSKTKRKK KSSGI+TVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLS+SGLL KK
Subjt:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

KAG7035221.1 hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-73

88.76

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Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF
        MSD  DTDSDAPEEFTAEQGIQQD+EIRKVQKES ARVVREGKERRR WAEKKTPR SKKGE VED AETP H+DQVSKLGMLPSNLVQLLA+REKQVF 
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF

Query:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK
        SDP DEKPA KSKTKRKK KSSGIETVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLS+SGLL KK
Subjt:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

XP_022947715.1 uncharacterized protein LOC111451498 [Cucurbita moschata]

1.3e-72

88.2

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Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF
        MSD  DTDSDAPEEFTAEQGIQQD+EIRKVQKES ARVVREGKERRR WAEKKTPR SKK E VED AETP H+DQVSKLGMLPSNLVQLLA+REKQVF 
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF

Query:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK
        SDP DEKPA KSKTKRKK KSSGIETVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLS+SGLL KK
Subjt:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

XP_023533260.1 uncharacterized protein LOC111795202 [Cucurbita pepo subsp. pepo]

8.2e-72

87.64

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Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF
        MSD  DTDSDAPEEFTAEQGIQQD+EI KVQKES ARVVREGKERRR WAEKKTPR SKKGE VED AETP HDDQVSKLGML SNLVQLLA+REKQVF 
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF

Query:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK
        SDP DEKPA KSKTKR+K KSSGIETVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLS+SGLL KK
Subjt:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

XP_038901892.1 uncharacterized protein LOC120088571 [Benincasa hispida]

4.8e-72

86.59

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Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETP-THDDQVSKLGMLPSNLVQLLADREKQVF
        MSDREDTDSDAPEEFTAEQG+QQD+EIRKVQKESKARVVREGKERRRLWAEKKTPR SKKGE VED AE P  H DQ+SKLGMLPSN+VQLL DREKQVF
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETP-THDDQVSKLGMLPSNLVQLLADREKQVF

Query:  FSDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK
         SDP DEKPA+K K+KRKK KSSGIETVLL+ER PSQCL NSLEFLKKRKMNI+RSSSVLDNPNQALRLLS SGLL KK
Subjt:  FSDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LM07 Uncharacterized protein

9.8e-71

83.15

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Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF
        MSDRE+TDSDAPEEFTAEQG+QQD+EIRKVQKESKARV+REGKERRRLWAEKKTPR SKKGEIVED AE P +DD++SKLG LPSN+VQLL DREKQVF 
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF

Query:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK
        SD  DEKPA+K K KRKK KSSGIETVLLNER PS CLQNSLEFLKKRKMN++RSS+VL NPNQA RLLS+SGLL KK
Subjt:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

A0A5A7TWK6 Uncharacterized protein

4.5e-68

82.12

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Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF
        MSDRE+TDSDAPEEFTAEQG+QQD+EIRKVQ ESKARV+REGKERRRLWAEKKTPR SKKGEIVED AE P +DD+VSKLG LPSN+VQLL DREKQVF 
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF

Query:  SDPDDEKPAVKSKTKRKKIK-SSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK
        SD  DEKPA+K K KRKK K SSGIETVLL+ER PS CLQNSLEFLKKRKMN++RSS+VL+NPNQA RLLS+SGLL KK
Subjt:  SDPDDEKPAVKSKTKRKKIK-SSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

A0A6J1DXW1 uncharacterized protein LOC111025162

4.4e-71

86.44

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Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF
        MSD EDTDSDAPEEFTAEQGIQQDQEI KVQ ESKARVVREGKERRRLWAEKKTPR SKKGE VED AE P+H DQ SKLGMLPSNLVQLLADREKQVF 
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF

Query:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNK
        SDP DEKPA K KTKRKK KSSGIETV+LN+R P+QCLQNS+EFLKKRKMNI RSSSVLDNPNQALR LS+SGLL K
Subjt:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNK

A0A6J1G7P4 uncharacterized protein LOC111451498

6.1e-73

88.2

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Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF
        MSD  DTDSDAPEEFTAEQGIQQD+EIRKVQKES ARVVREGKERRR WAEKKTPR SKK E VED AETP H+DQVSKLGMLPSNLVQLLA+REKQVF 
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF

Query:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK
        SDP DEKPA KSKTKRKK KSSGIETVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLS+SGLL KK
Subjt:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

A0A6J1KZ49 uncharacterized protein LOC111499570

4.4e-71

85.96

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Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF
        MSD  DTDSDAPEEFTAEQGIQQD+EIRK+QKES ARVVREGKERRR WAEKKTPR SKKGE VED AETP H+DQVSKLGMLPSNLVQLLA+REKQVF 
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFF

Query:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK
        SDP DEKPA KSKT+R+K KSSGIETVLLN R PSQC QNSLEFLKKRKMNI RSSSVLDN NQALRLLS+SGLL KK
Subjt:  SDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G37090.1 unknown protein

3.7e-30

45.36

Show/hide

Query:  MSDRE--DTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKL---GMLPSNLVQLLADRE
        MSD +  D+DSDAPEE T EQ   +++ + K+Q+E+K RV RE KERR+L AE+ T R+S+K EI+ED  E    ++    L   G L  +++  LA+RE
Subjt:  MSDRE--DTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKL---GMLPSNLVQLLADRE

Query:  KQVFFSDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK
        KQ   SD ++E+  +    ++KK KSSGIETV+  E PP +CL+  L+FLK R+  + RSSSV+ N  QALRL + + L  K+
Subjt:  KQVFFSDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

AT4G37090.2 unknown protein

7.0e-29

45.36

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Query:  MSDRE--DTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKL---GMLPSNLVQLLADRE
        MSD +  D+DSDAPEE T EQ   +++ + K+Q+E+K RV RE KERR+L AE+ T R+S+K EI+ED  E    ++    L   G L  +++  LA+RE
Subjt:  MSDRE--DTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKL---GMLPSNLVQLLADRE

Query:  KQVFFSDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK
        KQ   SD ++E+  +    ++KK KSSGIETV+  E PP +CL+  L+FLK R+  + RSSSV+ N  QALRL + + L  K+
Subjt:  KQVFFSDPDDEKPAVKSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCGGACAGAGAAGATACCGATTCCGACGCCCCAGAGGAGTTCACCGCCGAGCAGGGAATACAGCAAGATCAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCCAG
GGTTGTTCGTGAAGGAAAAGAGCGTCGTAGACTGTGGGCTGAAAAGAAAACACCACGTCGGTCTAAAAAGGGTGAAATTGTCGAAGATGCAGCAGAAACCCCAACACATG
ATGATCAAGTCAGCAAGTTAGGAATGCTTCCCAGCAATCTTGTCCAACTGCTTGCTGATCGTGAGAAACAAGTTTTCTTTTCAGATCCTGACGATGAAAAACCTGCAGTG
AAGTCAAAAACAAAGAGAAAGAAAATCAAAAGCTCTGGGATTGAAACGGTTCTTTTAAACGAAAGACCACCATCTCAATGTTTACAGAACTCCTTGGAATTTTTGAAGAA
AAGGAAGATGAATATTTCAAGGTCATCATCGGTTCTCGACAATCCTAACCAAGCGTTGCGCCTTCTTTCTGCTTCTGGCTTGTTAAATAAGAAATAG

mRNA sequence

Show/hide mRNA sequence

TTCGATTTCGAGCAGCCAAAAAGTGCTAAACTCTTCATTCTTCAAGCGTCTCTTCAGATCCTGGACCCAAAACCCTGACGGAAACCCTAAAAAGAGAGTTGGTAATCAGA
TGTCGGACAGAGAAGATACCGATTCCGACGCCCCAGAGGAGTTCACCGCCGAGCAGGGAATACAGCAAGATCAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCCAGG
GTTGTTCGTGAAGGAAAAGAGCGTCGTAGACTGTGGGCTGAAAAGAAAACACCACGTCGGTCTAAAAAGGGTGAAATTGTCGAAGATGCAGCAGAAACCCCAACACATGA
TGATCAAGTCAGCAAGTTAGGAATGCTTCCCAGCAATCTTGTCCAACTGCTTGCTGATCGTGAGAAACAAGTTTTCTTTTCAGATCCTGACGATGAAAAACCTGCAGTGA
AGTCAAAAACAAAGAGAAAGAAAATCAAAAGCTCTGGGATTGAAACGGTTCTTTTAAACGAAAGACCACCATCTCAATGTTTACAGAACTCCTTGGAATTTTTGAAGAAA
AGGAAGATGAATATTTCAAGGTCATCATCGGTTCTCGACAATCCTAACCAAGCGTTGCGCCTTCTTTCTGCTTCTGGCTTGTTAAATAAGAAATAGCATTTTTGTTTCTA
AATCTGTCATAGCTTCAACAGGACAATGTATAATGTATTTGGGAATTCGTTGACGAGTTCAAGACTAATGCAACATGGAGAGTAAAAAAGTTTATTGAGTTCTTTTAGTG
GTCATAGTGAAGCAGAAGTTGAAAATGTTGGTA

Protein sequence

Show/hide protein sequence

MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRRSKKGEIVEDAAETPTHDDQVSKLGMLPSNLVQLLADREKQVFFSDPDDEKPAV
KSKTKRKKIKSSGIETVLLNERPPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSASGLLNKK

Tan0013710 (gene) of Snake gourd v1 genome