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Tan0013717 (gene) of Snake gourd v1 genome

Gene IDTan0013717
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG09:55520901..55525119
RNA-Seq ExpressionTan0013717
SyntenyTan0013717
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]6.3e-2528.69Show/hide
Query:  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWF
        M + +  Q    + L +ED    +I +D I + ++ +   +  K++  + +  E F  LI +IW+  G+V VE VG N F+ +F N+  + +  + GPW 
Subjt:  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWF

Query:  FDKCLIVFEEPRGNNYLSTLELRLS-----------------------------------------QNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMV
        F K LIV E+P+G   ++ L+   +                                         + +RVK+Q+D+ KPLKR ++IK G   E   + +
Subjt:  FDKCLIVFEEPRGNNYLSTLELRLS-----------------------------------------QNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMV

Query:  SYEKLGDFCYGCGIIGHLLKNCETHKNTHEA----ELLFGSWMR
         YE+L DFC+ CG IGH ++ C        A    +  FGSWMR
Subjt:  SYEKLGDFCYGCGIIGHLLKNCETHKNTHEA----ELLFGSWMR

TXG51459.1 hypothetical protein EZV62_023983 [Acer yangbiense]6.1e-2830.83Show/hide
Query:  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWF
        M + K  +    + L +ED    +++++D  + E ++   +  KI+ ++ +  E F  LI ++WS  G V +E +G N+F+ +FNN+ E+ +    GPW+
Subjt:  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWF

Query:  FDKCLIVFEEPRGNNYLSTLELR--LSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNCETHKNTHEA----ELLF
        FDK LIV E+P G       E +    + ++VK+QID+ KPLKR +++K         + + YE+L  FCY CG IGH  KNC   +   EA       +
Subjt:  FDKCLIVFEEPRGNNYLSTLELR--LSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNCETHKNTHEA----ELLF

Query:  GSWMRQRYRQTMEVRRNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGL
        GSWMR       +VR + +   H KV+   + E   +     +  R      +V+  +P    HGL
Subjt:  GSWMRQRYRQTMEVRRNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGL

TXG53376.1 hypothetical protein EZV62_022545 [Acer yangbiense]6.3e-2528.97Show/hide
Query:  MKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEP
        + L EED +  +++++  ID  +   +C+V  K++  + +  E F  LI +IWS  G+V VE VG NLF+ YFNN  ++ + +  GPW F   LIV E+ 
Subjt:  MKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEP

Query:  RGNNYLSTLELR-------------LSQNIR----------------------------VKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYG
         G   +S L                L  N R                            VK++ID+ KPLKR +K+K G   E   + + YEKL DFCY 
Subjt:  RGNNYLSTLELR-------------LSQNIR----------------------------VKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYG

Query:  CGIIGHLLKNC---ETHKNTHEAELL-FGSWMRQRYRQTMEVRRNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGLFHPEFS
        CG +G+ +K C   E  K   E  L  FGSW++       + R N +GN                 R R  G   D     ++  N +  K G   P+  
Subjt:  CGIIGHLLKNC---ETHKNTHEAELL-FGSWMRQRYRQTMEVRRNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGLFHPEFS

Query:  QVQKGICTEEK---TQSKPTE
        +V   +  ++K    + KP +
Subjt:  QVQKGICTEEK---TQSKPTE

TXG73661.1 hypothetical protein EZV62_002240 [Acer yangbiense]3.1e-2431.88Show/hide
Query:  MDDEKFNQFMAKMKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPW
        M + +  +    + L +ED    ++A++  ID  E   +C+V  K++  + +  + F  LI +IW+  G V +E VG N+F+ YF N  ++ +    GPW
Subjt:  MDDEKFNQFMAKMKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPW

Query:  FFDKCLIVFEEPRGNNYLSTLELRLSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNC---ETHKNTHE-AELLFG
         F   LIV E+P G            + IRV ++ID+ KPLKR +K+K G   E   + + YE+L +FC+ CG IGH +K C   E  K   E +   FG
Subjt:  FFDKCLIVFEEPRGNNYLSTLELRLSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNC---ETHKNTHE-AELLFG

Query:  SWMRQRYRQTMEVRRN----GEGNDHRKV
        SW++       ++R N    G  +D  ++
Subjt:  SWMRQRYRQTMEVRRN----GEGNDHRKV

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.8e-2631.3Show/hide
Query:  MDDEKFNQFMAKMKLT-EEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPW
        MD E       K KLT EED I  D+  D +  AE+ +   +  K++  R I A+V ++++   W +E ++ VE +G NLFL +F  E +  + M +GPW
Subjt:  MDDEKFNQFMAKMKLT-EEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPW

Query:  FFDKCLIVFEEPRGNNYLSTLE-----------------------LRLSQ-------------------NIRVKIQIDLQKPLKRGVKIKNGSMAEEKWI
        FFDK LIV ++P  +  +S LE                       +RL                     ++R+++ ID+ KPL+RG+KI         WI
Subjt:  FFDKCLIVFEEPRGNNYLSTLE-----------------------LRLSQ-------------------NIRVKIQIDLQKPLKRGVKIKNGSMAEEKWI

Query:  MVSYEKLGDFCYGCGIIGHLLKNCETH----KNTHEAELLFGSWMR
         + YE+L DFCY CG+IGH   +C+      ++   A   +G W+R
Subjt:  MVSYEKLGDFCYGCGIIGHLLKNCETH----KNTHEAELLFGSWMR

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein3.1e-2528.69Show/hide
Query:  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWF
        M + +  Q    + L +ED    +I +D I + ++ +   +  K++  + +  E F  LI +IW+  G+V VE VG N F+ +F N+  + +  + GPW 
Subjt:  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWF

Query:  FDKCLIVFEEPRGNNYLSTLELRLS-----------------------------------------QNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMV
        F K LIV E+P+G   ++ L+   +                                         + +RVK+Q+D+ KPLKR ++IK G   E   + +
Subjt:  FDKCLIVFEEPRGNNYLSTLELRLS-----------------------------------------QNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMV

Query:  SYEKLGDFCYGCGIIGHLLKNCETHKNTHEA----ELLFGSWMR
         YE+L DFC+ CG IGH ++ C        A    +  FGSWMR
Subjt:  SYEKLGDFCYGCGIIGHLLKNCETHKNTHEA----ELLFGSWMR

A0A5C7H421 CCHC-type domain-containing protein3.0e-2830.83Show/hide
Query:  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWF
        M + K  +    + L +ED    +++++D  + E ++   +  KI+ ++ +  E F  LI ++WS  G V +E +G N+F+ +FNN+ E+ +    GPW+
Subjt:  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWF

Query:  FDKCLIVFEEPRGNNYLSTLELR--LSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNCETHKNTHEA----ELLF
        FDK LIV E+P G       E +    + ++VK+QID+ KPLKR +++K         + + YE+L  FCY CG IGH  KNC   +   EA       +
Subjt:  FDKCLIVFEEPRGNNYLSTLELR--LSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNCETHKNTHEA----ELLF

Query:  GSWMRQRYRQTMEVRRNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGL
        GSWMR       +VR + +   H KV+   + E   +     +  R      +V+  +P    HGL
Subjt:  GSWMRQRYRQTMEVRRNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGL

A0A5C7HB59 Uncharacterized protein3.1e-2528.97Show/hide
Query:  MKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEP
        + L EED +  +++++  ID  +   +C+V  K++  + +  E F  LI +IWS  G+V VE VG NLF+ YFNN  ++ + +  GPW F   LIV E+ 
Subjt:  MKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEP

Query:  RGNNYLSTLELR-------------LSQNIR----------------------------VKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYG
         G   +S L                L  N R                            VK++ID+ KPLKR +K+K G   E   + + YEKL DFCY 
Subjt:  RGNNYLSTLELR-------------LSQNIR----------------------------VKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYG

Query:  CGIIGHLLKNC---ETHKNTHEAELL-FGSWMRQRYRQTMEVRRNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGLFHPEFS
        CG +G+ +K C   E  K   E  L  FGSW++       + R N +GN                 R R  G   D     ++  N +  K G   P+  
Subjt:  CGIIGHLLKNC---ETHKNTHEAELL-FGSWMRQRYRQTMEVRRNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGLFHPEFS

Query:  QVQKGICTEEK---TQSKPTE
        +V   +  ++K    + KP +
Subjt:  QVQKGICTEEK---TQSKPTE

A0A5C7IWJ4 CCHC-type domain-containing protein1.5e-2431.88Show/hide
Query:  MDDEKFNQFMAKMKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPW
        M + +  +    + L +ED    ++A++  ID  E   +C+V  K++  + +  + F  LI +IW+  G V +E VG N+F+ YF N  ++ +    GPW
Subjt:  MDDEKFNQFMAKMKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPW

Query:  FFDKCLIVFEEPRGNNYLSTLELRLSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNC---ETHKNTHE-AELLFG
         F   LIV E+P G            + IRV ++ID+ KPLKR +K+K G   E   + + YE+L +FC+ CG IGH +K C   E  K   E +   FG
Subjt:  FFDKCLIVFEEPRGNNYLSTLELRLSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNC---ETHKNTHE-AELLFG

Query:  SWMRQRYRQTMEVRRN----GEGNDHRKV
        SW++       ++R N    G  +D  ++
Subjt:  SWMRQRYRQTMEVRRN----GEGNDHRKV

A0A6J1DU55 uncharacterized protein LOC1110231354.7e-2631.3Show/hide
Query:  MDDEKFNQFMAKMKLT-EEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPW
        MD E       K KLT EED I  D+  D +  AE+ +   +  K++  R I A+V ++++   W +E ++ VE +G NLFL +F  E +  + M +GPW
Subjt:  MDDEKFNQFMAKMKLT-EEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPW

Query:  FFDKCLIVFEEPRGNNYLSTLE-----------------------LRLSQ-------------------NIRVKIQIDLQKPLKRGVKIKNGSMAEEKWI
        FFDK LIV ++P  +  +S LE                       +RL                     ++R+++ ID+ KPL+RG+KI         WI
Subjt:  FFDKCLIVFEEPRGNNYLSTLE-----------------------LRLSQ-------------------NIRVKIQIDLQKPLKRGVKIKNGSMAEEKWI

Query:  MVSYEKLGDFCYGCGIIGHLLKNCETH----KNTHEAELLFGSWMR
         + YE+L DFCY CG+IGH   +C+      ++   A   +G W+R
Subjt:  MVSYEKLGDFCYGCGIIGHLLKNCETH----KNTHEAELLFGSWMR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATGACAAGAGTTCTAGGGTTTTGATAATGGATGATGAAAAATTCAACCAATTTATGGCCAAAATGAAGCTAACTGAAGAGGATAACATAACGACGGACATTGC
AGATGACGATATCGACGAAGCAGAGAAGAAGATGAAGTGTATTGTGGCCTGTAAAATTATAATGAATAGATCTATTAAAGCAGAGGTTTTTACACAACTCATTCCGAAGA
TTTGGAGCTTGGAAGGCAAAGTGGCGGTGGAAAAAGTAGGGCATAACCTTTTCTTGTGCTACTTCAACAACGAAAGGGAGAAGAGGCAGACGATGTCAAGTGGGCCTTGG
TTTTTCGATAAATGTCTGATTGTTTTCGAAGAACCAAGAGGGAATAACTACCTCTCGACTCTGGAGTTAAGGTTATCTCAAAATATTAGGGTGAAAATTCAAATAGATTT
GCAGAAACCGCTAAAGAGGGGAGTTAAGATCAAGAACGGATCGATGGCTGAAGAAAAATGGATCATGGTATCCTATGAAAAATTAGGTGATTTTTGTTATGGGTGTGGCA
TAATAGGTCATCTTCTAAAGAACTGTGAAACACACAAAAACACTCATGAGGCTGAGCTTTTATTTGGGTCGTGGATGAGGCAAAGATATCGACAAACAATGGAGGTTCGA
AGAAATGGTGAAGGTAACGATCACCGAAAAGTTGAGGTAGAGGCGGTGCCGGAGACACAAGATTTGAGACGAGAGAGACAGAGGGGGGCCAGAGAAGATAAAGGGAAAGA
TGAAGTAAAGGAGATTAATCCAGTGGGAAAGAAACATGGTTTGTTTCATCCAGAATTTTCTCAAGTCCAAAAGGGGATTTGCACGGAAGAAAAGACTCAGTCAAAGCCGA
CAGAAGATCGTTTTTGCAAGGCCACATCGATTCGATGGTGGTTGCTAATGAGGGGTGCTGACGTTTCACGGGTTTCTATGGCAACCCTCAAATTGAGAATCGGAGCTCCT
CATGGTAGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATGACAAGAGTTCTAGGGTTTTGATAATGGATGATGAAAAATTCAACCAATTTATGGCCAAAATGAAGCTAACTGAAGAGGATAACATAACGACGGACATTGC
AGATGACGATATCGACGAAGCAGAGAAGAAGATGAAGTGTATTGTGGCCTGTAAAATTATAATGAATAGATCTATTAAAGCAGAGGTTTTTACACAACTCATTCCGAAGA
TTTGGAGCTTGGAAGGCAAAGTGGCGGTGGAAAAAGTAGGGCATAACCTTTTCTTGTGCTACTTCAACAACGAAAGGGAGAAGAGGCAGACGATGTCAAGTGGGCCTTGG
TTTTTCGATAAATGTCTGATTGTTTTCGAAGAACCAAGAGGGAATAACTACCTCTCGACTCTGGAGTTAAGGTTATCTCAAAATATTAGGGTGAAAATTCAAATAGATTT
GCAGAAACCGCTAAAGAGGGGAGTTAAGATCAAGAACGGATCGATGGCTGAAGAAAAATGGATCATGGTATCCTATGAAAAATTAGGTGATTTTTGTTATGGGTGTGGCA
TAATAGGTCATCTTCTAAAGAACTGTGAAACACACAAAAACACTCATGAGGCTGAGCTTTTATTTGGGTCGTGGATGAGGCAAAGATATCGACAAACAATGGAGGTTCGA
AGAAATGGTGAAGGTAACGATCACCGAAAAGTTGAGGTAGAGGCGGTGCCGGAGACACAAGATTTGAGACGAGAGAGACAGAGGGGGGCCAGAGAAGATAAAGGGAAAGA
TGAAGTAAAGGAGATTAATCCAGTGGGAAAGAAACATGGTTTGTTTCATCCAGAATTTTCTCAAGTCCAAAAGGGGATTTGCACGGAAGAAAAGACTCAGTCAAAGCCGA
CAGAAGATCGTTTTTGCAAGGCCACATCGATTCGATGGTGGTTGCTAATGAGGGGTGCTGACGTTTCACGGGTTTCTATGGCAACCCTCAAATTGAGAATCGGAGCTCCT
CATGGTAGCTTCTGA
Protein sequenceShow/hide protein sequence
MKNDKSSRVLIMDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPW
FFDKCLIVFEEPRGNNYLSTLELRLSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNCETHKNTHEAELLFGSWMRQRYRQTMEVR
RNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGLFHPEFSQVQKGICTEEKTQSKPTEDRFCKATSIRWWLLMRGADVSRVSMATLKLRIGAP
HGSF