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Tan0013734 (gene) of Snake gourd v1 genome

Gene IDTan0013734
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNA/RNP complex-1-interacting phosphatase, putative
Genome locationLG04:82892023..82892623
RNA-Seq ExpressionTan0013734
SyntenyTan0013734
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048367.1 putative RNA/RNP complex-1-interacting phosphatase [Cucumis melo var. makuwa]8.8e-4375.4Show/hide
Query:  MAALSAGHRHFF----GGAAVQFRNKISSPRSIALLCRHNQDPS-------EEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHRHFF    G A VQFRN+  SPRSIA+LC HNQDPS       E+  KK Q+RK+ + GFVQRFEKMG++LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRHFF----GGAAVQFRNKISSPRSIALLCRHNQDPS-------EEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFLWLSMPKQLW
        FAVYVYISQKIVCAYFLW+SMPK LW
Subjt:  FAVYVYISQKIVCAYFLWLSMPKQLW

KAG6581569.1 hypothetical protein SDJN03_21571, partial [Cucurbita argyrosperma subsp. sororia]6.3e-4177.5Show/hide
Query:  MAALSAGHRHFFGGAAVQFRNKISSPRSIALLC--RHNQDP---SEEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVY
        MAALSAGHRHFF   AVQF N+  SPR I LLC   HNQDP   SEEK+KK Q+ KQ + GF+QR++KMGMELKEKLSPQRKGDWKD+TLMSLSFAVYVY
Subjt:  MAALSAGHRHFFGGAAVQFRNKISSPRSIALLC--RHNQDP---SEEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVY

Query:  ISQKIVCAYFLWLSMPKQLW
        ISQKIVCAYFLW+SMPKQLW
Subjt:  ISQKIVCAYFLWLSMPKQLW

KAG6606884.1 hypothetical protein SDJN03_00226, partial [Cucurbita argyrosperma subsp. sororia]4.2e-4580.17Show/hide
Query:  MAALSAGHRHFFGGAAVQFRNKISSPRSIALLCRHNQ------DPSEEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYV
        MAALSAGHR+FFG AAV FRN+  SPRSI LLC HNQ      DPSEEK KK Q++KQ I GFVQRFEKMG+ELKEKLSPQRKGDWKDLTLMSLSFAVYV
Subjt:  MAALSAGHRHFFGGAAVQFRNKISSPRSIALLCRHNQ------DPSEEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYV

Query:  YISQKIVCAYFLWLSMPKQLW
        YISQKIVCAYF+W+SMPKQ+W
Subjt:  YISQKIVCAYFLWLSMPKQLW

KGN58582.1 hypothetical protein Csa_001602 [Cucumis sativus]4.8e-4172.22Show/hide
Query:  MAALSAGHRHFF----GGAAVQFRNKISSPRSIALLCRHNQDPS-------EEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHRHFF    G A + FRN+  SPRSI++LC HNQDPS       E+  KK Q+RK+ + GFVQRFEKMG++LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRHFF----GGAAVQFRNKISSPRSIALLCRHNQDPS-------EEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFLWLSMPKQLW
        FAVYVYISQKIVCAYFLW++MPK LW
Subjt:  FAVYVYISQKIVCAYFLWLSMPKQLW

XP_022152649.1 uncharacterized protein LOC111020315 [Momordica charantia]1.0e-4380.67Show/hide
Query:  MAALSAGHRHFF--GGAAVQFRNKISSPRSIALLCRHNQDPSEEKSKKGQDRK-QRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYIS
        MAALSAGHRHFF  G AA Q R + SSP+SI LLCRH+QDPSEE SK+G++RK Q+IGGFV+RFEKMGMELKEKLSPQRKGDWKD+ LMSLSFAVYVYIS
Subjt:  MAALSAGHRHFF--GGAAVQFRNKISSPRSIALLCRHNQDPSEEKSKKGQDRK-QRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYIS

Query:  QKIVCAYFLWLSMPK-QLW
        QKIVCAYF+W+SMPK QLW
Subjt:  QKIVCAYFLWLSMPK-QLW

TrEMBL top hitse value%identityAlignment
A0A0A0LD14 Uncharacterized protein2.3e-4172.22Show/hide
Query:  MAALSAGHRHFF----GGAAVQFRNKISSPRSIALLCRHNQDPS-------EEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHRHFF    G A + FRN+  SPRSI++LC HNQDPS       E+  KK Q+RK+ + GFVQRFEKMG++LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRHFF----GGAAVQFRNKISSPRSIALLCRHNQDPS-------EEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFLWLSMPKQLW
        FAVYVYISQKIVCAYFLW++MPK LW
Subjt:  FAVYVYISQKIVCAYFLWLSMPKQLW

A0A5D3BX35 Putative RNA/RNP complex-1-interacting phosphatase4.3e-4375.4Show/hide
Query:  MAALSAGHRHFF----GGAAVQFRNKISSPRSIALLCRHNQDPS-------EEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS
        MAALSAGHRHFF    G A VQFRN+  SPRSIA+LC HNQDPS       E+  KK Q+RK+ + GFVQRFEKMG++LKEKLSPQRKGDWKDLTLMSLS
Subjt:  MAALSAGHRHFF----GGAAVQFRNKISSPRSIALLCRHNQDPS-------EEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLS

Query:  FAVYVYISQKIVCAYFLWLSMPKQLW
        FAVYVYISQKIVCAYFLW+SMPK LW
Subjt:  FAVYVYISQKIVCAYFLWLSMPKQLW

A0A660KVF0 Uncharacterized protein3.2e-2252.94Show/hide
Query:  MAALSAGHRHFFGGAAVQFRNKISSPRSIALLCRHNQDPSEEKSKKGQDRKQRIGGFVQR----FEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYI
        MAALS GH         Q   K SSP ++ L C     P +  + + +  K +    +QR    FEK G  L+E LSP++KGDWKDLTLMSLSFAVYVYI
Subjt:  MAALSAGHRHFFGGAAVQFRNKISSPRSIALLCRHNQDPSEEKSKKGQDRKQRIGGFVQR----FEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYI

Query:  SQKIVCAYFLWLSMPKQLW
        SQK+VCAYF W+SMPKQLW
Subjt:  SQKIVCAYFLWLSMPKQLW

A0A6J1DGN1 uncharacterized protein LOC1110203155.0e-4480.67Show/hide
Query:  MAALSAGHRHFF--GGAAVQFRNKISSPRSIALLCRHNQDPSEEKSKKGQDRK-QRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYIS
        MAALSAGHRHFF  G AA Q R + SSP+SI LLCRH+QDPSEE SK+G++RK Q+IGGFV+RFEKMGMELKEKLSPQRKGDWKD+ LMSLSFAVYVYIS
Subjt:  MAALSAGHRHFF--GGAAVQFRNKISSPRSIALLCRHNQDPSEEKSKKGQDRK-QRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYIS

Query:  QKIVCAYFLWLSMPK-QLW
        QKIVCAYF+W+SMPK QLW
Subjt:  QKIVCAYFLWLSMPK-QLW

A0A6P9E117 uncharacterized protein LOC1183445074.6e-2153.39Show/hide
Query:  MAALSAGHRHFFGGAAVQFRNKISSPRSIALL-CRHNQ--DPSEEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYIS
        MAAL  GH  +     +Q   K SSPR+  LL C+ ++  D S  ++KK   R+  + G +  F K G  LKE +SPQ+KGDWKD+ LMSLSFAVYVYIS
Subjt:  MAALSAGHRHFFGGAAVQFRNKISSPRSIALL-CRHNQ--DPSEEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYIS

Query:  QKIVCAYFLWLSMPKQLW
        QKIVCAY  W+SMPKQ W
Subjt:  QKIVCAYFLWLSMPKQLW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52070.1 unknown protein8.0e-1046.15Show/hide
Query:  RSIALLCRHNQDPSEEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLW--LSMPKQLW
        RS+ ++    Q   EE     Q   +R+   +    K+G  LK +   ++KGD KDL LMSLSFAVYVYISQ +VCAYF W  LS PK  W
Subjt:  RSIALLCRHNQDPSEEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLW--LSMPKQLW

AT3G52070.2 unknown protein6.8e-0946.59Show/hide
Query:  RSIALLCRHNQDPSEEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLW--LSMPK
        RS+ ++    Q   EE     Q   +R+   +    K+G  LK +   ++KGD KDL LMSLSFAVYVYISQ +VCAYF W  LS PK
Subjt:  RSIALLCRHNQDPSEEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLW--LSMPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCGGTGGCGCCGCCGTGCAGTTCAGAAACAAAATCAGCAGCCCCAGATCGATCGCCCTCCTCTGCCGCCATAACCA
AGATCCTTCAGAAGAAAAATCGAAGAAAGGGCAAGACAGAAAACAGAGGATTGGTGGGTTTGTTCAGAGATTTGAGAAGATGGGAATGGAATTGAAGGAGAAATTGAGCC
CTCAGAGAAAAGGGGATTGGAAGGATTTGACATTGATGAGTCTTTCATTTGCTGTTTATGTGTATATTTCTCAGAAGATTGTTTGTGCTTATTTTCTTTGGTTGTCAATG
CCAAAACAACTATGGTAG
mRNA sequenceShow/hide mRNA sequence
GCCAATTCCCAACTTATTTTTGTCTACATATAACAAAAATTATCCATTTCTATTCCCCATTCATTCAAATTCAATCCATCCCCACAAAAATATCTCAAATCCCATTTTCT
TCTATCCATTTCCATGGCAGCCCTCTCCGCCGGCCACCGCCATTTCTTCGGTGGCGCCGCCGTGCAGTTCAGAAACAAAATCAGCAGCCCCAGATCGATCGCCCTCCTCT
GCCGCCATAACCAAGATCCTTCAGAAGAAAAATCGAAGAAAGGGCAAGACAGAAAACAGAGGATTGGTGGGTTTGTTCAGAGATTTGAGAAGATGGGAATGGAATTGAAG
GAGAAATTGAGCCCTCAGAGAAAAGGGGATTGGAAGGATTTGACATTGATGAGTCTTTCATTTGCTGTTTATGTGTATATTTCTCAGAAGATTGTTTGTGCTTATTTTCT
TTGGTTGTCAATGCCAAAACAACTATGGTAGAAGATGATCAATTTCAAAGGAAAGACTTAATCAGATCTCTTTGATTCTTGTGCTTTTCTTCTTGTTTGATATTTGTGTA
TCATATTCATAAGTTTCGAAATTGGTAGAAATTGGTCAGTTGAGATCAATT
Protein sequenceShow/hide protein sequence
MAALSAGHRHFFGGAAVQFRNKISSPRSIALLCRHNQDPSEEKSKKGQDRKQRIGGFVQRFEKMGMELKEKLSPQRKGDWKDLTLMSLSFAVYVYISQKIVCAYFLWLSM
PKQLW