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Tan0013747 (gene) of Snake gourd v1 genome

Gene IDTan0013747
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGRIP and coiled-coil domain-containing protein 1
Genome locationLG11:13332834..13337936
RNA-Seq ExpressionTan0013747
SyntenyTan0013747
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579058.1 hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2791.78Show/hide
Query:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARAGGRSR+GNE S G FLKAVFR LKMAEFEILFVLFFI+AFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_008463128.1 PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo]1.9e-2790.41Show/hide
Query:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GRSRNG++SS G FLKA FRFLKMAEFEILFVLFFI+AFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_022938472.1 uncharacterized protein LOC111444698 [Cucurbita moschata]3.3e-2790.41Show/hide
Query:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARAGGRSR+GNE S G FLKAVFR LKM EFEILFVLFFI+AFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_022993749.1 uncharacterized protein LOC111489659 [Cucurbita maxima]4.3e-2790.41Show/hide
Query:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MA AGGRSR+GNE S G FLK VFRFLKMAEFEILFVLFFI+AFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_023549700.1 uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo]3.3e-2791.78Show/hide
Query:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARAGGRSR+ NE S G FLKAVFRFLKMAEFEILFVLFFI+AFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
TrEMBL top hitse value%identityAlignment
A0A0A0KPT8 Uncharacterized protein1.0e-2689.04Show/hide
Query:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GR RNG +SS G FLKA FRFLKMAEFEILFVLFFI+AFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A1S3CK24 uncharacterized protein LOC1035013539.4e-2890.41Show/hide
Query:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GRSRNG++SS G FLKA FRFLKMAEFEILFVLFFI+AFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1CIZ9 uncharacterized protein LOC1110117893.6e-2786.3Show/hide
Query:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MAR GGRSRNGN+S+V  FLKAV RFLKMAEFEILF+LFF++AFI+FKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1FE48 uncharacterized protein LOC1114446981.6e-2790.41Show/hide
Query:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARAGGRSR+GNE S G FLKAVFR LKM EFEILFVLFFI+AFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1K0Z3 uncharacterized protein LOC1114896592.1e-2790.41Show/hide
Query:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MA AGGRSR+GNE S G FLK VFRFLKMAEFEILFVLFFI+AFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G14430.1 unknown protein1.6e-1654.67Show/hide
Query:  MARAGGRSRNG---NESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPF
        + R  G +R G   ++S +  F+ +VF F ++AEFEILFVLF +I +++FKDLTSRPEYN+ILV+KP G D+WPF
Subjt:  MARAGGRSRNG---NESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGGGCAGGTGGTCGGAGCAGGAATGGGAACGAATCGTCGGTAGGATGGTTTCTGAAAGCGGTGTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGT
TCTTTTCTTCATCATAGCTTTTATTGTCTTCAAAGATCTCACATCAAGACCAGAGTACAATCAGATCCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGT
AA
mRNA sequenceShow/hide mRNA sequence
AAATTACTAAACTTTGTAATTCAAAAAGAAAAAAAGAGATCCAAAATTTAAAAAAATTGTTTGCCGAAGAGTATTCAAACTGAAATCTGAATAAAATATCATATCAAATC
GACAAGTCTATTACATTACAACGTTCAATTGTCCGAATTCGAAAGAGAAATTTTTTACCAAATTAATAACTGGAGAGAGGAAAACTTCTAATAATGATCTTTTGATCGTT
GAACAGAAACCACAGTTCGTCAACAGCGGCAGTCGTCGTCGGTGGCTATGGCTCGGGCAGGTGGTCGGAGCAGGAATGGGAACGAATCGTCGGTAGGATGGTTTCTGAAA
GCGGTGTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTTTTCTTCATCATAGCTTTTATTGTCTTCAAAGATCTCACATCAAGACCAGAGTACAATCA
GATCCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGTAAATTCTTGACCTTTCATTCATGTGACTGACTTGTACTCAGCTTTCTAAGTTTGTATCGTTTT
TTTTTTTGTTGTTGATGTGCTGGATGATGTAAAAATGTTTATTTACATTTAGACATTTCTATTTATGTTTTCATGAATTGAAAGATTTTGAAGTAAATATTGGTTTTAGA
AATGTTGTGGAAGTGTCGAGAAAATTTCCAAAAATATCAAGGAAATTTTAATAATGTCAATGATATAAGTGATAAATGGTATTCTATATTTA
Protein sequenceShow/hide protein sequence
MARAGGRSRNGNESSVGWFLKAVFRFLKMAEFEILFVLFFIIAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ