| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-117 | 55.36 | Show/hide |
Query: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
MNGA ID++SQVSFILE+L +SFLQF SN VMNKI YTL TLLNELQ F+SLM+I+ + EANVA R +HRGSTSGTK + SS K KK K G
Subjt: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
Query: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
KA+ AA+ KK K A KG CF CN+ HWKRN PK+L E+K Q K DLLV ETCLVE++DSA I+DSG TNHVC SFQGISSW+QL G +T++VG
Subjt: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
Query: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ
Subjt: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
Query: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
HINLNRI+RLVK+GLLS+LEENSLPVCE CLEGKMTKR F+ K +R KE LEL+H DLCGPM+VKARGG+EYF++F DDYSR
Subjt: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
Query: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
YGY+YLM KSE LEKFKEYK +VEN L KTIKT RSD+GGEYMD KF
Subjt: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
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| KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa] | 5.4e-118 | 55.36 | Show/hide |
Query: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
MNGA ID++SQVSFILE+L +SFLQF SN VMNKI YTL TLLNELQ F+SLM+I+ + EANVA R +HRGSTSGTK + SS K KK K G
Subjt: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
Query: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
KA+ AA+ KK K A KG CF CN+ HWKRN PK+L E+K Q K DLLV ETCLVE++DSA I+DSG TNHVC SFQGISSWQQL G +T++VG
Subjt: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
Query: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
+G +VSA A+G ++L+ +LLL+N+Y+VP RNL+S+ L+EQ
Subjt: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
Query: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
HINLNRI+RLVK+GLLS+LEENSLPVCE CLEGKMTKR F+ K +R KE LEL+H +LCGPM+VKARGG+EYF++F DDYSR
Subjt: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
Query: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
YGY+YLM KSE LEKFKEYK +VEN L KTIKT RSD+GGEYMD KF
Subjt: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-117 | 55.36 | Show/hide |
Query: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
MNGA ID++SQVSFILE+L +SFLQF SN VMNKI YTL TLLNELQ F+SLM+I+ + EANVA R +HRGSTSGTK + SS K KK K G
Subjt: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
Query: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
KA+ AA+ KK K A KG CF CN+ HWKRN PK+L E+K Q K DLLV ETCLVE++DSA I+DSG TNHVC SFQGISSW+QL G +T++VG
Subjt: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
Query: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ
Subjt: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
Query: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
HINLNRI+RLVK+GLLS+LEENSLPVCE CLEGKMTKR F+ K +R KE LEL+H DLCGPM+VKARGG+EYF++F DDYSR
Subjt: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
Query: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
YGY+YLM KSE LEKFKEYK +VEN L KTIKT RSD+GGEYMD KF
Subjt: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-117 | 55.36 | Show/hide |
Query: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
MNGA ID++SQVSFILE+L +SFLQF SN VMNKI YTL TLLNELQ F+SLM+I+ + EANVA R +HRGSTSGTK + SS K KK K G
Subjt: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
Query: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
KA+ AA+ KK K A KG CF CN+ HWKRN PK+L E+K Q K DLLV ETCLVE++DSA I+DSG TNHVC SFQGISSW+QL G +T++VG
Subjt: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
Query: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ
Subjt: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
Query: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
HINLNRI+RLVK+GLLS+LEENSLPVCE CLEGKMTKR F+ K +R KE LEL+H DLCGPM+VKARGG+EYF++F DDYSR
Subjt: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
Query: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
YGY+YLM KSE LEKFKEYK +VEN L KTIKT RSD+GGEYMD KF
Subjt: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-117 | 55.36 | Show/hide |
Query: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
MNGA ID++SQVSFILE+L +SFLQF SN VMNKI YTL TLLNELQ F+SLM+I+ + EANVA R +HRGSTSGTK + SS K KK K G
Subjt: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
Query: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
KA+ AA+ KK K A KG CF CN+ HWKRN PK+L E+K Q K DLLV ETCLVE++DSA I+DSG TNHVC SFQGISSW+QL G +T++VG
Subjt: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
Query: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ
Subjt: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
Query: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
HINLNRI+RLVK+GLLS+LEENSLPVCE CLEGKMTKR F+ K +R KE LEL+H DLCGPM+VKARGG+EYF++F DDYSR
Subjt: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
Query: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
YGY+YLM KSE LEKFKEYK +VEN L KTIKT RSD+GGEYMD KF
Subjt: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 1.0e-117 | 55.36 | Show/hide |
Query: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
MNGA ID++SQVSFILE+L +SFLQF SN VMNKI YTL TLLNELQ F+SLM+I+ + EANVA R +HRGSTSGTK + SS K KK K G
Subjt: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
Query: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
KA+ AA+ KK K A KG CF CN+ HWKRN PK+L E+K Q K DLLV ETCLVE++DSA I+DSG TNHVC SFQGISSW+QL G +T++VG
Subjt: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
Query: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ
Subjt: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
Query: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
HINLNRI+RLVK+GLLS+LEENSLPVCE CLEGKMTKR F+ K +R KE LEL+H DLCGPM+VKARGG+EYF++F DDYSR
Subjt: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
Query: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
YGY+YLM KSE LEKFKEYK +VEN L KTIKT RSD+GGEYMD KF
Subjt: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
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| A0A5A7TU93 Gag/pol protein | 2.6e-118 | 55.36 | Show/hide |
Query: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
MNGA ID++SQVSFILE+L +SFLQF SN VMNKI YTL TLLNELQ F+SLM+I+ + EANVA R +HRGSTSGTK + SS K KK K G
Subjt: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
Query: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
KA+ AA+ KK K A KG CF CN+ HWKRN PK+L E+K Q K DLLV ETCLVE++DSA I+DSG TNHVC SFQGISSWQQL G +T++VG
Subjt: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
Query: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
+G +VSA A+G ++L+ +LLL+N+Y+VP RNL+S+ L+EQ
Subjt: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
Query: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
HINLNRI+RLVK+GLLS+LEENSLPVCE CLEGKMTKR F+ K +R KE LEL+H +LCGPM+VKARGG+EYF++F DDYSR
Subjt: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
Query: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
YGY+YLM KSE LEKFKEYK +VEN L KTIKT RSD+GGEYMD KF
Subjt: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
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| A0A5A7TWB9 Gag/pol protein | 1.0e-117 | 55.36 | Show/hide |
Query: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
MNGA ID++SQVSFILE+L +SFLQF SN VMNKI YTL TLLNELQ F+SLM+I+ + EANVA R +HRGSTSGTK + SS K KK K G
Subjt: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
Query: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
KA+ AA+ KK K A KG CF CN+ HWKRN PK+L E+K Q K DLLV ETCLVE++DSA I+DSG TNHVC SFQGISSW+QL G +T++VG
Subjt: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
Query: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ
Subjt: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
Query: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
HINLNRI+RLVK+GLLS+LEENSLPVCE CLEGKMTKR F+ K +R KE LEL+H DLCGPM+VKARGG+EYF++F DDYSR
Subjt: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
Query: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
YGY+YLM KSE LEKFKEYK +VEN L KTIKT RSD+GGEYMD KF
Subjt: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
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| A0A5A7V4M1 Gag/pol protein | 1.0e-117 | 55.36 | Show/hide |
Query: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
MNGA ID++SQVSFILE+L +SFLQF SN VMNKI YTL TLLNELQ F+SLM+I+ + EANVA R +HRGSTSGTK + SS K KK K G
Subjt: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
Query: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
KA+ AA+ KK K A KG CF CN+ HWKRN PK+L E+K Q K DLLV ETCLVE++DSA I+DSG TNHVC SFQGISSW+QL G +T++VG
Subjt: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
Query: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ
Subjt: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
Query: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
HINLNRI+RLVK+GLLS+LEENSLPVCE CLEGKMTKR F+ K +R KE LEL+H DLCGPM+VKARGG+EYF++F DDYSR
Subjt: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
Query: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
YGY+YLM KSE LEKFKEYK +VEN L KTIKT RSD+GGEYMD KF
Subjt: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
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| A0A5D3CPJ6 Gag/pol protein | 1.0e-117 | 55.36 | Show/hide |
Query: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
MNGA ID++SQVSFILE+L +SFLQF SN VMNKI YTL TLLNELQ F+SLM+I+ + EANVA R +HRGSTSGTK + SS K KK K G
Subjt: MNGASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQSLMRIRTPEAEANVA--YRSYHRGSTSGTKFVASSHPKGKNKKMKKG---
Query: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
KA+ AA+ KK K A KG CF CN+ HWKRN PK+L E+K Q K DLLV ETCLVE++DSA I+DSG TNHVC SFQGISSW+QL G +T++VG
Subjt: KADRVAAQKGKKVKELAEKGKCFICNRNDHWKRNYPKFLVERK--NQDKCDLLVTETCLVESNDSACILDSGTTNHVCFSFQGISSWQQLREGGVTLQVG
Query: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ L+EQ
Subjt: SGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSISFLIEQC-----------------------------------------------------
Query: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
HINLNRI+RLVK+GLLS+LEENSLPVCE CLEGKMTKR F+ K +R KE LEL+H DLCGPM+VKARGG+EYF++F DDYSR
Subjt: ------------------HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSR
Query: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
YGY+YLM KSE LEKFKEYK +VEN L KTIKT RSD+GGEYMD KF
Subjt: YGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYMDTKF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.1e-09 | 29.23 | Show/hide |
Query: INLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFS--RKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSRYGYIYLMHRKSETLEKF
+ + R + LL+ L E S +CE CL GK + F + + +K L ++H D+CGP++ YFV F+D ++ Y YL+ KS+ F
Subjt: INLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFS--RKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSRYGYIYLMHRKSETLEKF
Query: KEYKTKVENLLGKTIKTLRSDQGGEYMDTK
+++ K E + L D G EY+ +
Subjt: KEYKTKVENLLGKTIKTLRSDQGGEYMDTK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-19 | 35.38 | Show/hide |
Query: HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSRYGYIYLMHRKSETLEKFK
H++ + L K L+S + ++ C+ CL GK + F R +L+L++ D+CGPM +++ GG +YFV+FIDD SR ++Y++ K + + F+
Subjt: HINLNRIDRLVKSGLLSQLEENSLPVCELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSRYGYIYLMHRKSETLEKFK
Query: EYKTKVENLLGKTIKTLRSDQGGEYMDTKF
++ VE G+ +K LRSD GGEY +F
Subjt: EYKTKVENLLGKTIKTLRSDQGGEYMDTKF
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 3.1e-07 | 26.81 | Show/hide |
Query: HINLNRIDRLVKSGLLSQLEENSLP-------VCELCLEGKMTKRLF---SRKRYRVK-ELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSRYGYIYLM
H N I + +K ++ L+E+ + C CL GK TK SR +Y+ E + +H D+ GP+ + YF+SF D+ +R+ ++Y +
Subjt: HINLNRIDRLVKSGLLSQLEENSLP-------VCELCLEGKMTKRLF---SRKRYRVK-ELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSRYGYIYLM
Query: H--RKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEY
H R+ L F ++N + ++ D+G EY
Subjt: H--RKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.7e-10 | 23.42 | Show/hide |
Query: ILDSGTTNHVCFSFQGISSWQQLREGGVTLQVGSGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSI----------------SFLIEQCHINL
+LDSG T+H+ F +S Q GG + V G + + G L + L L N+ VP +NL+S+ SF ++ + +
Subjt: ILDSGTTNHVCFSFQGISSWQQLREGGVTLQVGSGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSI----------------SFLIEQCHINL
Query: NRIDRLVKSGLLSQLEENSLPV-----------------------------------------------CELCLEGKMTKRLFSRKRYRVKELLELIHFD
+ K L +S PV C CL K K FS+ LE I+ D
Subjt: NRIDRLVKSGLLSQLEENSLPV-----------------------------------------------CELCLEGKMTKRLFSRKRYRVKELLELIHFD
Query: LCGPMSVKARGGYEYFVSFIDDYSRYGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYM
+ + + Y Y+V F+D ++RY ++Y + +KS+ E F +K +EN I T SD GGE++
Subjt: LCGPMSVKARGGYEYFVSFIDDYSRYGYIYLMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYM
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-07 | 20.96 | Show/hide |
Query: GASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQS-LMRIRTPEAEANVAYRSYHRGSTSGTKFVASSHPKGKNKKMKKGKADRVA
G +D QV +LE L + + +L + L N +S L+ + + E A HR + + + N + + + +
Subjt: GASIDDSSQVSFILETLSKSFLQFSSNVVMNKIIYTLATLLNELQNFQS-LMRIRTPEAEANVAYRSYHRGSTSGTKFVASSHPKGKNKKMKKGKADRVA
Query: AQKGKKVKELAEK--GKCFICNRNDHWKRNYPKF--LVERKNQDKCDLLVT-----ETCLVES--NDSACILDSGTTNHVCFSFQGISSWQQLREGGVTL
+ + + G+C IC+ H + P+ NQ + T V S N + +LDSG T+H+ F + S+ Q GG +
Subjt: AQKGKKVKELAEK--GKCFICNRNDHWKRNYPKF--LVERKNQDKCDLLVT-----ETCLVES--NDSACILDSGTTNHVCFSFQGISSWQQLREGGVTL
Query: QVGSGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSI----------------SFLIEQCHINLNRIDRLVKSGLL------------------
+ G + G L + L L+ + VP +NL+S+ SF ++ + + + K L
Subjt: QVGSGEIVSAAAIGKVKLFFGGKYLLLDNLYIVPGFTRNLVSI----------------SFLIEQCHINLNRIDRLVKSGLL------------------
Query: --------------------SQLEENSLPV---------CELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSRYGYIY
S + +SLPV C C K K FS + LE I+ D+ + + Y Y+V F+D ++RY ++Y
Subjt: --------------------SQLEENSLPV---------CELCLEGKMTKRLFSRKRYRVKELLELIHFDLCGPMSVKARGGYEYFVSFIDDYSRYGYIY
Query: LMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYM
+ +KS+ + F +K+ VEN I TL SD GGE++
Subjt: LMHRKSETLEKFKEYKTKVENLLGKTIKTLRSDQGGEYM
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