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Tan0013817 (gene) of Snake gourd v1 genome

Gene IDTan0013817
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionkatanin p60 ATPase-containing subunit A-like 2 isoform X1
Genome locationLG03:609052..612439
RNA-Seq ExpressionTan0013817
SyntenyTan0013817
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034721.1 Katanin p60 ATPase-containing subunit A-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-1259.72Show/hide
Query:  SSSRSAPGVMSNQN------------------MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        S S SAPG + N+N                   +  DIIRGNPDI+WESIKGLEHAKCLLKEAVVMPIKYPK
Subjt:  SSSRSAPGVMSNQN------------------MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

XP_022146517.1 katanin p60 ATPase-containing subunit A-like 2 isoform X1 [Momordica charantia]1.1e-1258.23Show/hide
Query:  FALMSSSRSAPGVMSNQNMMGM----------------------DIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP
        F + SSSRSAP  +SNQN + +                      DIIRGNPDI+WESIKGLEHAKCLLKEAVVMPIKYP
Subjt:  FALMSSSRSAPGVMSNQNMMGM----------------------DIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP

XP_022146519.1 katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Momordica charantia]1.1e-1258.23Show/hide
Query:  FALMSSSRSAPGVMSNQNMMGM----------------------DIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP
        F + SSSRSAP  +SNQN + +                      DIIRGNPDI+WESIKGLEHAKCLLKEAVVMPIKYP
Subjt:  FALMSSSRSAPGVMSNQNMMGM----------------------DIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP

XP_022925900.1 katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Cucurbita moschata]1.9e-1256.25Show/hide
Query:  FALMSSSRSAPGVMSNQN----------------------MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        F L S S SAPG + N+N                       +  DIIRGNPDI+WESIKGLEHAKCLLKEAVVMPIKYPK
Subjt:  FALMSSSRSAPGVMSNQN----------------------MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

XP_022978400.1 katanin p60 ATPase-containing subunit A-like 2 isoform X2 [Cucurbita maxima]3.2e-1256.25Show/hide
Query:  FALMSSSRSAPGVMSNQNM----------------------MGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        F L S S SAPG + N+NM                      +  DIIRGNPDI+WESIKGLE AKCLLKEAVVMPIKYPK
Subjt:  FALMSSSRSAPGVMSNQNM----------------------MGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

TrEMBL top hitse value%identityAlignment
A0A6J1CYC4 katanin p60 ATPase-containing subunit A-like 2 isoform X25.4e-1358.23Show/hide
Query:  FALMSSSRSAPGVMSNQNMMGM----------------------DIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP
        F + SSSRSAP  +SNQN + +                      DIIRGNPDI+WESIKGLEHAKCLLKEAVVMPIKYP
Subjt:  FALMSSSRSAPGVMSNQNMMGM----------------------DIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP

A0A6J1CZS9 katanin p60 ATPase-containing subunit A-like 2 isoform X15.4e-1358.23Show/hide
Query:  FALMSSSRSAPGVMSNQNMMGM----------------------DIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP
        F + SSSRSAP  +SNQN + +                      DIIRGNPDI+WESIKGLEHAKCLLKEAVVMPIKYP
Subjt:  FALMSSSRSAPGVMSNQNMMGM----------------------DIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP

A0A6J1EDG8 katanin p60 ATPase-containing subunit A-like 2 isoform X11.0e-1156.58Show/hide
Query:  SSSRSAPGVMSNQN----------------------MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        S S SAPG + N+N                       +  DIIRGNPDI+WESIKGLEHAKCLLKEAVVMPIKYPK
Subjt:  SSSRSAPGVMSNQN----------------------MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

A0A6J1EJI5 katanin p60 ATPase-containing subunit A-like 2 isoform X29.1e-1356.25Show/hide
Query:  FALMSSSRSAPGVMSNQN----------------------MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        F L S S SAPG + N+N                       +  DIIRGNPDI+WESIKGLEHAKCLLKEAVVMPIKYPK
Subjt:  FALMSSSRSAPGVMSNQN----------------------MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

A0A6J1IPZ9 katanin p60 ATPase-containing subunit A-like 2 isoform X21.6e-1256.25Show/hide
Query:  FALMSSSRSAPGVMSNQNM----------------------MGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        F L S S SAPG + N+NM                      +  DIIRGNPDI+WESIKGLE AKCLLKEAVVMPIKYPK
Subjt:  FALMSSSRSAPGVMSNQNM----------------------MGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

SwissProt top hitse value%identityAlignment
A0JMA9 Katanin p60 ATPase-containing subunit A-like 23.4e-0450Show/hide
Query:  MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        ++  DI   NP++ W+ I GL+ AK L+KEAVV PI+YP+
Subjt:  MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

Q3B8D5 Katanin p60 ATPase-containing subunit A-like 23.4e-0450Show/hide
Query:  MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        ++  DI   NP++ W+ I GL+ AK L+KEAVV PI+YP+
Subjt:  MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

Q8IYT4 Katanin p60 ATPase-containing subunit A-like 23.4e-0452.5Show/hide
Query:  MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        ++  DI   NP+I+W  I GL+ AK L+KEAVV PI+YP+
Subjt:  MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

Q9D3R6 Katanin p60 ATPase-containing subunit A-like 23.4e-0452.5Show/hide
Query:  MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        ++  DI   NP+I+W  I GL+ AK L+KEAVV PI+YP+
Subjt:  MMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

Q9ZNT0 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 15.7e-0448.57Show/hide
Query:  IIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        I+R  P+I+W  + GLE AK  L+EAV++P+K+P+
Subjt:  IIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

Arabidopsis top hitse value%identityAlignment
AT1G08270.1 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330)1.2e-0448.57Show/hide
Query:  IIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        IIR  P+++W  + GLE AK  LKEAV++P+ +P+
Subjt:  IIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

AT1G08270.2 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330)1.2e-0448.57Show/hide
Query:  IIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        IIR  P+++W  + GLE AK  LKEAV++P+ +P+
Subjt:  IIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

AT2G27600.1 AAA-type ATPase family protein4.1e-0548.57Show/hide
Query:  IIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK
        I+R  P+I+W  + GLE AK  L+EAV++P+K+P+
Subjt:  IIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK

AT2G34560.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.3e-1181.58Show/hide
Query:  MGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP
        +  DIIRGNP+I+WESIKGLE+AK LLKEAVVMPIKYP
Subjt:  MGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP

AT2G34560.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.3e-1181.58Show/hide
Query:  MGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP
        +  DIIRGNP+I+WESIKGLE+AK LLKEAVVMPIKYP
Subjt:  MGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATTCCTCTGCTAGCGTTTCACCTTGATACAAACAATGGTAGGATGGCGCCATCCTATTTCGATCCCTTCACTCTTCCCATCTTTTGTATTACGAAGATCTGTGT
CGCCATTTCCCCCTTTGCTAAGTCAAGAACTGAAGATGGGGTTGCACATTTGTTGTCATCGGTGGGCAATGGGGAGGTGGAGAGGTCTAGAGGCGAAACAGAAGGTTTCT
TGGGCATTGAAATGGACTGCCAGGTTTGTGTTGTGGGTGGAGATTTATGGGTCAAGGTAGACGGTTGCAGTAGAGGTAGAATTGGGGGTGTGGGTGAGATGAGAGATTTT
AGCCATGAGAGCAAGCATAATTTCGCTCTTATGAGTAGCTCAAGATCGGCACCTGGTGTTATGTCCAACCAGAATATGATGGGTATGGATATAATTCGTGGAAATCCAGA
TATTGAGTGGGAAAGCATCAAAGGTTTAGAACATGCCAAATGCTTACTCAAGGAAGCAGTGGTCATGCCAATAAAATACCCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCATTCCTCTGCTAGCGTTTCACCTTGATACAAACAATGGTAGGATGGCGCCATCCTATTTCGATCCCTTCACTCTTCCCATCTTTTGTATTACGAAGATCTGTGT
CGCCATTTCCCCCTTTGCTAAGTCAAGAACTGAAGATGGGGTTGCACATTTGTTGTCATCGGTGGGCAATGGGGAGGTGGAGAGGTCTAGAGGCGAAACAGAAGGTTTCT
TGGGCATTGAAATGGACTGCCAGGTTTGTGTTGTGGGTGGAGATTTATGGGTCAAGGTAGACGGTTGCAGTAGAGGTAGAATTGGGGGTGTGGGTGAGATGAGAGATTTT
AGCCATGAGAGCAAGCATAATTTCGCTCTTATGAGTAGCTCAAGATCGGCACCTGGTGTTATGTCCAACCAGAATATGATGGGTATGGATATAATTCGTGGAAATCCAGA
TATTGAGTGGGAAAGCATCAAAGGTTTAGAACATGCCAAATGCTTACTCAAGGAAGCAGTGGTCATGCCAATAAAATACCCCAAGTGA
Protein sequenceShow/hide protein sequence
MGIPLLAFHLDTNNGRMAPSYFDPFTLPIFCITKICVAISPFAKSRTEDGVAHLLSSVGNGEVERSRGETEGFLGIEMDCQVCVVGGDLWVKVDGCSRGRIGGVGEMRDF
SHESKHNFALMSSSRSAPGVMSNQNMMGMDIIRGNPDIEWESIKGLEHAKCLLKEAVVMPIKYPK