CuGenDBv2

Gene ID	Tan0013824
Organism	Trichosanthes anguina (Snake gourd v1)
Description	DUF1990 domain-containing protein
Genome location	LG03:76113459..76119509
RNA-Seq Expression	Tan0013824
Synteny	Tan0013824
Gene Ontology terms	NA
InterPro domains	IPR018960 - Domain of unknown function DUF1990

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134836.1 UPF0548 protein At2g17695 isoform X1 [Cucumis sativus]

3.5e-106

88.94

Show/hide

Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQED-NELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVK
        MVFLCWSRPSPQEQKACI+++GSFNYNSKFRGATANPSSCLQED   +SQ+GFLLNHARILVGSGV +YEKGKKALQNWRHFGLNWAFVDSSTPVHPGVK
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQED-NELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVK

Query:  FCVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVK
        FCVCAKEFLPWV +PLQI+YVNENRDT   RTCFSFGSGTLQGHLLAGEERFSIEMD N QVWYEILSFSKPAHILSFLSYPY+ILRQKYFA+QSTNAVK
Subjt:  FCVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVK

Query:  NYLTANHS
         YLT  HS
Subjt:  NYLTANHS

XP_008440884.1 PREDICTED: UPF0548 protein At2g17695 [Cucumis melo]

4.5e-106

88.41

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Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFLCWSRPSPQEQKACI+++GSFNY+SKFRGATANPSSCLQED  +SQ+GFLLNHARILVGSGVE+YEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        CVCAKEFLPWV +PLQI+YVNENR+T   RTCFSFGSGTLQGHLLAGEERFSIEMD N QVWYEILS SKPAHILSFLSYPYVILRQKYFA+QSTNA K 
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTANHS
        YLT  HS
Subjt:  YLTANHS

XP_022950650.1 UPF0548 protein At2g17695 [Cucurbita moschata]

2.3e-110

92.75

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Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFLCWSRPSPQEQK CID+SGSFNY+SKFRGATANPSSCLQED  LSQ+GFLLNHARILVGSGVE+YEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        CVCAKEFLPWV MPLQI+YVNENR T MARTCFSFGSGTLQGHLLAGEERFSIEMD N QVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVK 
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTANHS
        YLTA HS
Subjt:  YLTANHS

XP_022979037.1 UPF0548 protein At2g17695 [Cucurbita maxima]

3.0e-110

92.27

Show/hide

Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFLCWSRPSPQEQK CID+SGSFNY+SKFRGATANPSSCLQED  LSQ+GFLLNHARILVGSGVE+YEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        CVCAKEFLPWV MPLQI+YVNENR T MARTCFSFGSGTLQGHLLAGEERFSIEMD N QVWYEILSFSKPAHILSFLSYPY+ILRQKYFAYQSTNAVK 
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTANHS
        YLTA HS
Subjt:  YLTANHS

XP_038883220.1 UPF0548 protein At2g17695 isoform X1 [Benincasa hispida]

3.7e-108

89.86

Show/hide

Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFLCWSRPSPQ+QKACI+++GSFNY+SKFRGATANPS+CLQEDN +SQ+GFLLNHARILVGSGVE+YEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        CVCAKEFLPWV +PLQI+YVNENRDTK A TCFSFGSGTL GHLLAGEERFSIEMD N QVWYEILSFSKPAHILSFLSYPYVILRQKYFA+QSTNAVK 
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTANHS
        YLTA HS
Subjt:  YLTANHS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKV8 DUF1990 domain-containing protein

1.7e-106

88.94

Show/hide

Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQED-NELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVK
        MVFLCWSRPSPQEQKACI+++GSFNYNSKFRGATANPSSCLQED   +SQ+GFLLNHARILVGSGV +YEKGKKALQNWRHFGLNWAFVDSSTPVHPGVK
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQED-NELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVK

Query:  FCVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVK
        FCVCAKEFLPWV +PLQI+YVNENRDT   RTCFSFGSGTLQGHLLAGEERFSIEMD N QVWYEILSFSKPAHILSFLSYPY+ILRQKYFA+QSTNAVK
Subjt:  FCVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVK

Query:  NYLTANHS
         YLT  HS
Subjt:  NYLTANHS

A0A1S3B2T0 UPF0548 protein At2g17695

2.2e-106

88.41

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Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFLCWSRPSPQEQKACI+++GSFNY+SKFRGATANPSSCLQED  +SQ+GFLLNHARILVGSGVE+YEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        CVCAKEFLPWV +PLQI+YVNENR+T   RTCFSFGSGTLQGHLLAGEERFSIEMD N QVWYEILS SKPAHILSFLSYPYVILRQKYFA+QSTNA K 
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTANHS
        YLT  HS
Subjt:  YLTANHS

A0A6J1CKD3 UPF0548 protein At2g17695

9.2e-105

88.78

Show/hide

Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFLCWSRPSP E KACID+SGSFNY+SKFRGATANPSS L+ED  L Q+GFLLNHARILVGSGVE+YEKGKKALQNWRHFGLNWAFVDSSTPV+PGVKF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        CVC+KEFLPWV MPLQI+YVNENRD KMARTCFSFGSGTLQGHLLAGEERFSIEMDKN QVWYEILSFSKPAHILSF+SYPYVILRQKYFA+QS+NAVK 
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTAN
        Y TA+
Subjt:  YLTAN

A0A6J1GGC4 UPF0548 protein At2g17695

1.1e-110

92.75

Show/hide

Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFLCWSRPSPQEQK CID+SGSFNY+SKFRGATANPSSCLQED  LSQ+GFLLNHARILVGSGVE+YEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        CVCAKEFLPWV MPLQI+YVNENR T MARTCFSFGSGTLQGHLLAGEERFSIEMD N QVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVK 
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTANHS
        YLTA HS
Subjt:  YLTANHS

A0A6J1IMP9 UPF0548 protein At2g17695

1.5e-110

92.27

Show/hide

Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFLCWSRPSPQEQK CID+SGSFNY+SKFRGATANPSSCLQED  LSQ+GFLLNHARILVGSGVE+YEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        CVCAKEFLPWV MPLQI+YVNENR T MARTCFSFGSGTLQGHLLAGEERFSIEMD N QVWYEILSFSKPAHILSFLSYPY+ILRQKYFAYQSTNAVK 
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTANHS
        YLTA HS
Subjt:  YLTANHS

SwissProt top hits

e value

%identity

Alignment

Q86JL6 UPF0548 protein

2.2e-18

28.64

Show/hide

Query:  CWSRPSPQEQKACID--KSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWA-FVDSSTPVHPGVKFC
        C+ +PS  + K  I+  +   F Y++ +   T + ++  + + +     F ++  +I +G+GVE ++K   AL+ W+HF L+W  F   +TP+  G    
Subjt:  CWSRPSPQEQKACID--KSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWA-FVDSSTPVHPGVKFC

Query:  VCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQ-------VWYEILSFSKPAHILSFLSYPYVILRQKYFAYQS
        + +K+   W+    +I Y+ +  D +     F +  GTL+ H+  GEERF IE  ++         V+YE+LSFS+P++ LS L YP     Q  F   S
Subjt:  VCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQ-------VWYEILSFSKPAHILSFLSYPYVILRQKYFAYQS

Query:  TNAVKNYLTANHS
         N +   + +N +
Subjt:  TNAVKNYLTANHS

Q8GXB1 UPF0548 protein At2g17695

3.9e-76

61.95

Show/hide

Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFL W RPS ++Q+  I+K+G+FNY++K+RG ++   + L+ED+E+ + GFL+NHAR+LVGSG ESYEKGKKALQNW+HFG++WAFVD +TPV  G KF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        C+C KE LPWV +PLQ++YV+E+R ++     F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL YPYV LRQK+FA  S+ AV  
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTAN
        ++ A+
Subjt:  YLTAN

Q9RST8 UPF0548 protein DR_2035

7.5e-11

31.47

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Query:  RILVGSGVESYEKGKKALQNWRHFGLNWAF---VDSSTPV-HPGVKFCVCAKEFLPW--------VAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLL
        R+ VG G   +E+ K AL+  + F  +W      ++STP+   G    +  + F PW          M  ++LY+ +  D       + FG GTL GHL+
Subjt:  RILVGSGVESYEKGKKALQNWRHFGLNWAF---VDSSTPV-HPGVKFCVCAKEFLPW--------VAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLL

Query:  AGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQK
         GEERF +E D    VW+++ +FS+ A   S  + P V   Q+
Subjt:  AGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQK

Arabidopsis top hits

e value

%identity

Alignment

AT2G17695.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

2.8e-77

61.95

Show/hide

Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFL W RPS ++Q+  I+K+G+FNY++K+RG ++   + L+ED+E+ + GFL+NHAR+LVGSG ESYEKGKKALQNW+HFG++WAFVD +TPV  G KF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        C+C KE LPWV +PLQ++YV+E+R ++     F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL YPYV LRQK+FA  S+ AV  
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTAN
        ++ A+
Subjt:  YLTAN

AT2G17695.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

2.8e-77

61.95

Show/hide

Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFL W RPS ++Q+  I+K+G+FNY++K+RG ++   + L+ED+E+ + GFL+NHAR+LVGSG ESYEKGKKALQNW+HFG++WAFVD +TPV  G KF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        C+C KE LPWV +PLQ++YV+E+R ++     F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL YPYV LRQK+FA  S+ AV  
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTAN
        ++ A+
Subjt:  YLTAN

AT2G17695.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960).

2.8e-77

61.95

Show/hide

Query:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF
        MVFL W RPS ++Q+  I+K+G+FNY++K+RG ++   + L+ED+E+ + GFL+NHAR+LVGSG ESYEKGKKALQNW+HFG++WAFVD +TPV  G KF
Subjt:  MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKF

Query:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN
        C+C KE LPWV +PLQ++YV+E+R ++     F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL YPYV LRQK+FA  S+ AV  
Subjt:  CVCAKEFLPWVAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKN

Query:  YLTAN
        ++ A+
Subjt:  YLTAN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGTTCTTGTGTTGGTCTCGCCCATCTCCTCAAGAGCAGAAGGCTTGCATTGACAAGTCTGGTTCCTTCAACTATAACAGCAAGTTTAGAGGAGCTACTGCTAATCC
CAGCTCTTGCCTTCAAGAAGATAACGAGCTCTCACAACAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGTCTTATGAAAAGGGGAAGAAAG
CTCTTCAGAACTGGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCAACTCCAGTTCATCCGGGAGTTAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCTTGG
GTGGCGATGCCTCTTCAAATTCTATATGTAAATGAGAACAGGGATACCAAGATGGCTAGAACATGTTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCCGG
TGAAGAACGCTTTTCAATTGAGATGGACAAGAACAAGCAGGTGTGGTATGAAATTCTTTCCTTCTCGAAGCCTGCCCACATATTATCATTCCTCAGTTATCCCTATGTTA
TTCTTCGGCAAAAGTATTTTGCTTATCAGTCTACAAATGCTGTTAAGAACTATTTGACTGCCAATCATTCTTAG

mRNA sequence

Show/hide mRNA sequence

TATTAAAAAAAAGAATATAATAGTGCTAAACTACACGTCATATTGTAACAATCCCTACACTCATTTCTCCATCTTTGACTTTTGGACCAATCTTGTTCTCAAGTTTCAAC
TAACTGAAACTTCTTCGGACTACGGCAATACTGAAACTACACGTCGACTTCCAGTTCCATTACATTACTTCTCGGCTAGCCAATTTTTCCTTCACTGTATTCTGTGCTCG
CGATTCAGAGACCTGTAAAATCCCACAAGTTAGTGAAGCTAAAGGAATTGCGATTCGAGTATTGCTGTTGTTGGTGAAGAATTAAAAATGGTGTTCTTGTGTTGGTCTCG
CCCATCTCCTCAAGAGCAGAAGGCTTGCATTGACAAGTCTGGTTCCTTCAACTATAACAGCAAGTTTAGAGGAGCTACTGCTAATCCCAGCTCTTGCCTTCAAGAAGATA
ACGAGCTCTCACAACAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGTCTTATGAAAAGGGGAAGAAAGCTCTTCAGAACTGGAGGCATTTT
GGATTGAATTGGGCATTTGTTGATTCCTCAACTCCAGTTCATCCGGGAGTTAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCTTGGGTGGCGATGCCTCTTCAAATTCT
ATATGTAAATGAGAACAGGGATACCAAGATGGCTAGAACATGTTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCCGGTGAAGAACGCTTTTCAATTGAGA
TGGACAAGAACAAGCAGGTGTGGTATGAAATTCTTTCCTTCTCGAAGCCTGCCCACATATTATCATTCCTCAGTTATCCCTATGTTATTCTTCGGCAAAAGTATTTTGCT
TATCAGTCTACAAATGCTGTTAAGAACTATTTGACTGCCAATCATTCTTAGTGGTTCCAGCAGCAAAATTACTTCTTCCTGCTCTTCAATCCTCCAAAGTGTAGCATTCA
GTCCTTAGATAATATCCTGTTTGTTTGAAGCAAAAAATGCCATCATCAAGACATTGGAATACCTCAACTATTCAAATGATTTCATCTTCACTGCCTTAGATAATCAAATC
CAACCAAAATATTCATAAATTTGACAACATCTTATTATTGAGATACAACTCCTGTCTCCTAGTGCTTTTATATACAACCAAACTCTTAAT

Protein sequence

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MVFLCWSRPSPQEQKACIDKSGSFNYNSKFRGATANPSSCLQEDNELSQQGFLLNHARILVGSGVESYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPW
VAMPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNKQVWYEILSFSKPAHILSFLSYPYVILRQKYFAYQSTNAVKNYLTANHS

Tan0013824 (gene) of Snake gourd v1 genome