; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013836 (gene) of Snake gourd v1 genome

Gene IDTan0013836
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionBolA protein
Genome locationLG05:72246778..72248029
RNA-Seq ExpressionTan0013836
SyntenyTan0013836
Gene Ontology termsGO:0001732 - formation of cytoplasmic translation initiation complex (biological process)
GO:0005852 - eukaryotic translation initiation factor 3 complex (cellular component)
GO:0016282 - eukaryotic 43S preinitiation complex (cellular component)
GO:0033290 - eukaryotic 48S preinitiation complex (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR002634 - BolA protein
IPR036065 - BolA-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64204.1 hypothetical protein Csa_014195 [Cucumis sativus]3.2e-4496.08Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG
        MASRGANVVLSRANRMKTKLQSALSAS LEIEDVSHQHAGHAAVKGS GETHFNVKIVSPKFEGQSLVKRHRMVYD LA+ELQSGLHAISIVAKTPQETG
Subjt:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG

Query:  AK
        AK
Subjt:  AK

TYJ99061.1 protein BOLA1 [Cucumis melo var. makuwa]2.1e-4396.04Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG
        MASRGANVVLSRANRMKTKLQSALSAS LEIEDVSHQHAGHAAVKGS GETHFNVKIVSPKFEGQSLVKRHRMVYD LA+ELQSGLHAISIVAKTPQETG
Subjt:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG

Query:  A
        A
Subjt:  A

XP_022994950.1 protein BOLA1, chloroplastic [Cucurbita maxima]1.9e-4496.08Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG
        MASRGANVVLSRANRMKTKLQSALSAS LEIEDVSHQHAGHA VKGSDGETHFNVKIVSP FEGQSLVKRHRMVYD LADELQSGLHAISIVAKTPQETG
Subjt:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG

Query:  AK
        AK
Subjt:  AK

XP_028756592.1 protein BOLA1, chloroplastic-like [Prosopis alba]6.9e-3984.47Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDG-ETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQET
        MASRGAN++LSRANR+KTKLQSAL A+ LE+EDVS+QHAGHAA+KG+ G ETHFN+KIVSPKF+GQSLVKRHRMVYDLLADELQSGLHA+SIVAKTPQET
Subjt:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDG-ETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQET

Query:  GAK
         AK
Subjt:  GAK

XP_028779098.1 protein BOLA1, chloroplastic-like [Prosopis alba]1.2e-3884.47Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDG-ETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQET
        MASRGAN++LSRANR+KTKLQSAL A+ LE+EDVS+QHAGHAA+KG+ G ETHFN+KIVSPKF+GQSLVKRHRMVYDLLADELQSGLHA+SIVAKTPQET
Subjt:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDG-ETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQET

Query:  GAK
         AK
Subjt:  GAK

TrEMBL top hitse value%identityAlignment
A0A0A0LT67 Uncharacterized protein1.5e-4496.08Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG
        MASRGANVVLSRANRMKTKLQSALSAS LEIEDVSHQHAGHAAVKGS GETHFNVKIVSPKFEGQSLVKRHRMVYD LA+ELQSGLHAISIVAKTPQETG
Subjt:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG

Query:  AK
        AK
Subjt:  AK

A0A444YZ34 Uncharacterized protein9.7e-3986.54Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQE-
        MASRGA+VVLSRANR+K+KLQ+AL A+ LE++DVS+QHAGHAAVKG SD ETHFNVKIVSPKF+GQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQE 
Subjt:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQE-

Query:  TGAK
        TGAK
Subjt:  TGAK

A0A5D3BK08 Protein BOLA11.0e-4396.04Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG
        MASRGANVVLSRANRMKTKLQSALSAS LEIEDVSHQHAGHAAVKGS GETHFNVKIVSPKFEGQSLVKRHRMVYD LA+ELQSGLHAISIVAKTPQETG
Subjt:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG

Query:  A
        A
Subjt:  A

A0A6J1K2R4 protein BOLA1, chloroplastic9.0e-4596.08Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG
        MASRGANVVLSRANRMKTKLQSALSAS LEIEDVSHQHAGHA VKGSDGETHFNVKIVSP FEGQSLVKRHRMVYD LADELQSGLHAISIVAKTPQETG
Subjt:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG

Query:  AK
        AK
Subjt:  AK

A0A6P4DHI0 protein BOLA1, chloroplastic9.7e-3986.54Show/hide
Query:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQE-
        MASRGA+VVLSRANR+K+KLQ+AL A+ LE++DVS+QHAGHAAVKG SD ETHFNVKIVSPKF+GQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQE 
Subjt:  MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQE-

Query:  TGAK
        TGAK
Subjt:  TGAK

SwissProt top hitse value%identityAlignment
Q12238 UV-induced protein uvi312.3e-1344.57Show/hide
Query:  LSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG--SDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIV-AKTPQE
        + R +R+   L  AL    + + + S++H+ H A+KG     ETHF ++IVSP+F G S V RHR+VY LL DE   GLHA+ I  +KTP E
Subjt:  LSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG--SDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIV-AKTPQE

Q3E793 BolA-like protein 11.8e-1353.52Show/hide
Query:  SHQHAGHAAVKGS-DGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADEL--QSGLHAISIVAKTPQETGAK
        SH+H GHA V+G+   ETHF +++VS KFEG  L +RHRMVY LL DE+   +G+HA+ +  KTPQE  +K
Subjt:  SHQHAGHAAVKGS-DGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADEL--QSGLHAISIVAKTPQETGAK

Q5RCE5 BolA-like protein 14.3e-1242.86Show/hide
Query:  SRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG
        S G+  V      ++TKL+ ALS   LE+ + S    GHA   GS  ETHF V +VS +FEG S ++RHR+++  LA+EL   +HA++I A+TP + G
Subjt:  SRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETG

Q682I1 Protein BOLA1, chloroplastic2.6e-2561.22Show/hide
Query:  ANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETGAK
        +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHA +KG +D ETHFNVKIVS  FEG +LVKRHR+VY LL +EL +GLHA+SIV+KTP E+ +K
Subjt:  ANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETGAK

Q84W65 SufE-like protein 1, chloroplastic/mitochondrial9.6e-2865.66Show/hide
Query:  GANVVL--SRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGS---DGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQE
        G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHAAV+GS   DGETHFN++IVS  F+G+SLVKRHR++YDLL DEL+SGLHA+SIVAKTP E
Subjt:  GANVVL--SRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGS---DGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQE

Arabidopsis top hitse value%identityAlignment
AT1G55805.1 BolA-like family protein1.9e-2661.22Show/hide
Query:  ANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETGAK
        +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHA +KG +D ETHFNVKIVS  FEG +LVKRHR+VY LL +EL +GLHA+SIV+KTP E+ +K
Subjt:  ANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETGAK

AT4G26500.1 chloroplast sulfur E6.8e-2965.66Show/hide
Query:  GANVVL--SRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGS---DGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQE
        G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHAAV+GS   DGETHFN++IVS  F+G+SLVKRHR++YDLL DEL+SGLHA+SIVAKTP E
Subjt:  GANVVL--SRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGS---DGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQE

AT5G09830.1 BolA-like family protein1.1e-0537.65Show/hide
Query:  RMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISI-VAKTPQE
        +++  L S L    LE+ D+S          G  G + F V++VS +FEG+ L++RHRMV   L +E++  +HA+SI  A+TPQ+
Subjt:  RMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISI-VAKTPQE

AT5G17560.1 BolA-like family protein1.3e-0636.9Show/hide
Query:  MKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAI-SIVAKTPQE
        M+ K++  L+A  + + D+S            DG  H  + +VS  FEGQS V R RMVY  + +ELQ+ +HA+  +  KTP E
Subjt:  MKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAI-SIVAKTPQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACGAGGGGCAAACGTGGTGCTCTCGAGGGCGAACAGGATGAAGACGAAGTTGCAATCAGCACTATCAGCGAGTTTTCTGGAAATCGAGGACGTTTCGCACCA
GCACGCTGGGCATGCGGCTGTGAAGGGCAGCGATGGAGAGACTCATTTCAATGTAAAGATAGTGTCTCCAAAATTTGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGG
TGTATGATTTGTTGGCTGATGAGCTTCAGTCTGGATTGCATGCAATTTCAATCGTGGCAAAGACTCCCCAAGAAACTGGAGCGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATTTTCTCTTCAATACCGAATTGCGTTGAATTGAAGCCGCACTGCCAAAGTCGACCGTCTCCGAGCATCCAGCGGGCAAACATCAAGTAACGACGACATTTAATCGAACA
CTATGGCTTCACGAGGGGCAAACGTGGTGCTCTCGAGGGCGAACAGGATGAAGACGAAGTTGCAATCAGCACTATCAGCGAGTTTTCTGGAAATCGAGGACGTTTCGCAC
CAGCACGCTGGGCATGCGGCTGTGAAGGGCAGCGATGGAGAGACTCATTTCAATGTAAAGATAGTGTCTCCAAAATTTGAAGGGCAGAGCCTTGTGAAGCGCCATAGAAT
GGTGTATGATTTGTTGGCTGATGAGCTTCAGTCTGGATTGCATGCAATTTCAATCGTGGCAAAGACTCCCCAAGAAACTGGAGCGAAATGATGTTCAGATTCGCCTCACA
GTGTGAGTTTTCAAATGAACTTTTAGCTTAGAATTGTAAGAATTTAGGCATTTATGCTGGCTCTCATCTGATGTTTTCTTGACCAGAAATGGTAATGAAAGGTGCAAGAG
TTTTCAAATGGCAAGTTTTGTTTGAGATTGTGTACTCTTAGAATTTGTGTGGTTGAATCTGAAATAATCATAAGCTGCTATTTAACTTCATGGGATGAGTTAAAAGCTCT
TAAATGCCATGGAAAATCTTCTGTTGTTTATCACAACTCACAAGGCACTCTGAGGGAAGAATGCAACTTAGAGAACAATGAATGTCTTTTGATTTAATAGCTGTTACTTT
ACCTCACACTCCTTTTTCTGTCCCTAAAAATGCAAACTGTCTTAACTGTGCTGTTTATTTCATATTTTATTAGAGTTATAATTTTAAAGTAGTTGCAATTGAACTTCTTT
CACTTTTGTTGGGTCTAAATCCCTACCAATACCCTATTTTGTTGTCGTATTACACATTGAATGGTTTCTAATCCAAAAGGCCAAAACAGATGAAACGTTTGATTATATAT
TTTGTCCCCAT
Protein sequenceShow/hide protein sequence
MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSDGETHFNVKIVSPKFEGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETGAK