| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0051006.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.3e-36 | 50.81 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV---------------------------------------------------------
MSIK S K+LPDLSKLEPLDG NYRRWSQKLLIFF+QLEVDYV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV---------------------------------------------------------
Query: ---------------------IWSTLESRYGGDDVGRRKYVVGKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
IWSTLESRYGGDD GR+KYVVGKWLQFQM DDK VM+Q+HEYENLVANVLS+GMKMCEILQA V
Subjt: ---------------------IWSTLESRYGGDDVGRRKYVVGKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
|
|
| KAA0058501.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.3e-37 | 63.57 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYVI---------------------------------WSTLESRYGGDDVGRRKYVVGKW
MSIK S K+L DLSKLEPLDG NYRRWSQKLLIFF+QLEVDYV+ STLESRYGGDD GR+KYVVGKW
Subjt: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYVI---------------------------------WSTLESRYGGDDVGRRKYVVGKW
Query: LQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
LQFQM D K V++Q+HEYENLVANVLS+GMKMCEILQA V
Subjt: LQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
|
|
| TYK04394.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 3.3e-36 | 50.81 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV---------------------------------------------------------
MSIK S K+LPDLSKLEPLDG NYRRWSQKLLIFF+QLEVDYV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV---------------------------------------------------------
Query: ---------------------IWSTLESRYGGDDVGRRKYVVGKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
IWSTLESRYGGDD GR+KYVVGKWLQFQM DDK VM+Q+HEYENLVANVLS+GMKMCEILQA V
Subjt: ---------------------IWSTLESRYGGDDVGRRKYVVGKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
|
|
| TYK07244.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 2.3e-37 | 63.57 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYVI---------------------------------WSTLESRYGGDDVGRRKYVVGKW
MSIK S K+L DLSKLEPLDG NYRRWSQKLLIFF+QLEVDYV+ STLESRYGGDD GR+KYVVGKW
Subjt: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYVI---------------------------------WSTLESRYGGDDVGRRKYVVGKW
Query: LQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
LQFQM D K V++Q+HEYENLVANVLS+GMKMCEILQA V
Subjt: LQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
|
|
| TYK30642.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-36 | 61.54 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV------------------------------------IWSTLESRYGGDDVGRRKYVV
MSIK S K+LPDLSKLEPLDG NYRRWS+KLLIFF+QLE DYV IWSTLESRY GDD GR+KYVV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV------------------------------------IWSTLESRYGGDDVGRRKYVV
Query: GKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
GKWLQF+M DDK V++Q+HEYENLVANVLS+GMKMC+ILQA V
Subjt: GKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U9X9 Ty1-copia retrotransposon protein | 1.6e-36 | 50.81 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV---------------------------------------------------------
MSIK S K+LPDLSKLEPLDG NYRRWSQKLLIFF+QLEVDYV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV---------------------------------------------------------
Query: ---------------------IWSTLESRYGGDDVGRRKYVVGKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
IWSTLESRYGGDD GR+KYVVGKWLQFQM DDK VM+Q+HEYENLVANVLS+GMKMCEILQA V
Subjt: ---------------------IWSTLESRYGGDDVGRRKYVVGKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
|
|
| A0A5A7UYD5 Ty1-copia retrotransposon protein | 1.1e-37 | 63.57 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYVI---------------------------------WSTLESRYGGDDVGRRKYVVGKW
MSIK S K+L DLSKLEPLDG NYRRWSQKLLIFF+QLEVDYV+ STLESRYGGDD GR+KYVVGKW
Subjt: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYVI---------------------------------WSTLESRYGGDDVGRRKYVVGKW
Query: LQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
LQFQM D K V++Q+HEYENLVANVLS+GMKMCEILQA V
Subjt: LQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
|
|
| A0A5D3BZI1 Ty1-copia retrotransposon protein | 1.6e-36 | 50.81 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV---------------------------------------------------------
MSIK S K+LPDLSKLEPLDG NYRRWSQKLLIFF+QLEVDYV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV---------------------------------------------------------
Query: ---------------------IWSTLESRYGGDDVGRRKYVVGKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
IWSTLESRYGGDD GR+KYVVGKWLQFQM DDK VM+Q+HEYENLVANVLS+GMKMCEILQA V
Subjt: ---------------------IWSTLESRYGGDDVGRRKYVVGKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
|
|
| A0A5D3C7N0 Ty1-copia retrotransposon protein | 1.1e-37 | 63.57 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYVI---------------------------------WSTLESRYGGDDVGRRKYVVGKW
MSIK S K+L DLSKLEPLDG NYRRWSQKLLIFF+QLEVDYV+ STLESRYGGDD GR+KYVVGKW
Subjt: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYVI---------------------------------WSTLESRYGGDDVGRRKYVVGKW
Query: LQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
LQFQM D K V++Q+HEYENLVANVLS+GMKMCEILQA V
Subjt: LQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
|
|
| A0A5D3E411 Ty1-copia retrotransposon protein | 7.2e-37 | 61.54 | Show/hide |
Query: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV------------------------------------IWSTLESRYGGDDVGRRKYVV
MSIK S K+LPDLSKLEPLDG NYRRWS+KLLIFF+QLE DYV IWSTLESRY GDD GR+KYVV
Subjt: MSIK-SGKVLPDLSKLEPLDGANYRRWSQKLLIFFKQLEVDYV------------------------------------IWSTLESRYGGDDVGRRKYVV
Query: GKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
GKWLQF+M DDK V++Q+HEYENLVANVLS+GMKMC+ILQA V
Subjt: GKWLQFQMMDDKSVMDQVHEYENLVANVLSKGMKMCEILQAKV
|
|
