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Tan0013866 (gene) of Snake gourd v1 genome

Gene IDTan0013866
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionThiF domain-containing protein
Genome locationLG02:2884821..2885528
RNA-Seq ExpressionTan0013866
SyntenyTan0013866
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022864.1 hypothetical protein SDJN02_16600, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-5992.06Show/hide
Query:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS
        MNRRSR FPRS KSHSETFH+YLKPGALAQIRNSRMIARFNRVNL+SQIYSTRS SLSPP+AP+DS LLQVNIVDASPCFAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS

Query:  LWFLSSNPTNLTPDSPPDPVIEVLGG
        LWFLSS+PTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSNPTNLTPDSPPDPVIEVLGG

XP_022135897.1 uncharacterized protein LOC111007734 [Momordica charantia]3.5e-5388.1Show/hide
Query:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS
        MNRRSR F RS  S SE+FH+YLKPGALAQIRNSRMIARFNRVNLVSQIYS RS SLSPPSAP+DSGLLQVNIVDASPCFAGRVYGP CLQRKKLLA+KS
Subjt:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS

Query:  LWFLSSNPTNLTPDSPPDPVIEVLGG
        LWFLS +PTNL PDSPPDPVIEVLGG
Subjt:  LWFLSSNPTNLTPDSPPDPVIEVLGG

XP_022930695.1 uncharacterized protein LOC111437092 [Cucurbita moschata]3.7e-5892.06Show/hide
Query:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS
        MNRRSR FPRS KSHSETFH+YLKPGALAQIRNSRMIARFNRVNLVSQIYSTR  SLSPP+AP+DS LLQVNIVDASPCFAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS

Query:  LWFLSSNPTNLTPDSPPDPVIEVLGG
        LWFLSS+PTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSNPTNLTPDSPPDPVIEVLGG

XP_022989505.1 uncharacterized protein LOC111486563 [Cucurbita maxima]1.1e-5792.06Show/hide
Query:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS
        MNRRSR FPRS KSHSETFH+YLKPGALAQIRNSRMIARFNRVNLVSQIYSTRS SLSPP+AP+DS LLQVNIVDASPCFAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS

Query:  LWFLSSNPTNLTPDSPPDPVIEVLGG
        LWFLSS+ TNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSNPTNLTPDSPPDPVIEVLGG

XP_023530330.1 uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo]6.2e-5892.06Show/hide
Query:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS
        MNRRSR F RS KSHSETFH+YLKPGALAQIRNSRMIARFNRVNLVSQIYSTRS SLSPP+AP+DS LLQVNIVDASPCFAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS

Query:  LWFLSSNPTNLTPDSPPDPVIEVLGG
        LWFLSS+PTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSNPTNLTPDSPPDPVIEVLGG

TrEMBL top hitse value%identityAlignment
A0A6J1C424 uncharacterized protein LOC1110077341.7e-5388.1Show/hide
Query:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS
        MNRRSR F RS  S SE+FH+YLKPGALAQIRNSRMIARFNRVNLVSQIYS RS SLSPPSAP+DSGLLQVNIVDASPCFAGRVYGP CLQRKKLLA+KS
Subjt:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS

Query:  LWFLSSNPTNLTPDSPPDPVIEVLGG
        LWFLS +PTNL PDSPPDPVIEVLGG
Subjt:  LWFLSSNPTNLTPDSPPDPVIEVLGG

A0A6J1EXJ2 uncharacterized protein LOC1114370921.8e-5892.06Show/hide
Query:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS
        MNRRSR FPRS KSHSETFH+YLKPGALAQIRNSRMIARFNRVNLVSQIYSTR  SLSPP+AP+DS LLQVNIVDASPCFAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS

Query:  LWFLSSNPTNLTPDSPPDPVIEVLGG
        LWFLSS+PTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSNPTNLTPDSPPDPVIEVLGG

A0A6J1GLZ8 uncharacterized protein LOC1114552011.6e-5186.61Show/hide
Query:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASK-
        MNRRSR   RS  SHSETFH+YLKPGALAQIRNSRMIARFNRVNLVSQIYSTRS SLSP +AP+ SGLLQVNI DASPCFAGRVYGPLCLQRKKLLA+K 
Subjt:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASK-

Query:  SLWFLSSNPTNLTPDSPPDPVIEVLGG
        SLWFL+S+PTNLTPDSPPDPVI VLGG
Subjt:  SLWFLSSNPTNLTPDSPPDPVIEVLGG

A0A6J1HVZ0 uncharacterized protein LOC1114683469.7e-4983.46Show/hide
Query:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASK-
        MNRRSR   RS  SHSETFH+YLKPGALAQIRNSRMIARFNRVNLVSQIYSTR  SLS  + PM SGLLQVN+ DASPCFAGRVYGPLCLQRKKLLA+K 
Subjt:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASK-

Query:  SLWFLSSNPTNLTPDSPPDPVIEVLGG
        SLWFL+S+ TNLTPDSPPDPVI VLGG
Subjt:  SLWFLSSNPTNLTPDSPPDPVIEVLGG

A0A6J1JMJ5 uncharacterized protein LOC1114865635.1e-5892.06Show/hide
Query:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS
        MNRRSR FPRS KSHSETFH+YLKPGALAQIRNSRMIARFNRVNLVSQIYSTRS SLSPP+AP+DS LLQVNIVDASPCFAGRVYGPLCLQRKKLLA+KS
Subjt:  MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKS

Query:  LWFLSSNPTNLTPDSPPDPVIEVLGG
        LWFLSS+ TNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSNPTNLTPDSPPDPVIEVLGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G26960.1 unknown protein3.0e-1036.07Show/hide
Query:  RSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFS--LSPPSAPMDSGLL---QVNIVDASPCFAGRVYGPLCLQRKKLLASKSLWFL
        RSP   ++ FHRY+KPGALAQIRN+R+       N  S    TRS S  + PPS+  +S +    Q   +D  P    ++YGP  + RKKL  ++S   +
Subjt:  RSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFS--LSPPSAPMDSGLL---QVNIVDASPCFAGRVYGPLCLQRKKLLASKSLWFL

Query:  SSNPTNLTPDSPPDPVIEVLGG
          NP+       P+ ++E + G
Subjt:  SSNPTNLTPDSPPDPVIEVLGG

AT5G54970.1 unknown protein1.0e-1042.11Show/hide
Query:  RSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFS-LSPPSAPMDSGLLQVN--IVDASPCFAGRVYGPLCLQRKKLLASKSL
        +SP   S+ FHRYLKPGALAQIRNSR+ AR +  +LVS+   ++    +SP    +D          +D  P    ++YGP   QRKKL A++S+
Subjt:  RSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFS-LSPPSAPMDSGLLQVN--IVDASPCFAGRVYGPLCLQRKKLLASKSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGAAGATCCAGACCCTTTCCCCGATCGCCCAAGTCTCACTCCGAGACCTTTCACCGCTATCTAAAACCCGGCGCCCTAGCGCAAATTCGGAATTCCCGGATGAT
CGCCCGATTCAATCGCGTCAATTTGGTCTCTCAGATCTACTCCACTCGTTCCTTTTCTCTATCCCCGCCGAGTGCGCCGATGGACTCCGGTCTGCTTCAGGTGAACATTG
TTGATGCGTCTCCTTGCTTTGCTGGGAGGGTGTACGGTCCCCTCTGCTTGCAGAGGAAGAAACTCTTGGCTTCTAAGTCGTTGTGGTTCCTCAGTTCTAATCCGACGAAT
TTGACCCCCGATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATTTTATTTTCCCTCCACCTCTTTCCCGCCTCTCCTCTCTCTATCTCTCTCCTCTCAATCTTCTTCCTCCCGCCCGCTCCTCACTCCATAAATCCCCAATCCCCAATCAC
CATTTCCCCTCATCCCCAATCTCCATTCTTCCCCTTCCAATTCTCTGCAACATGAATCGAAGATCCAGACCCTTTCCCCGATCGCCCAAGTCTCACTCCGAGACCTTTCA
CCGCTATCTAAAACCCGGCGCCCTAGCGCAAATTCGGAATTCCCGGATGATCGCCCGATTCAATCGCGTCAATTTGGTCTCTCAGATCTACTCCACTCGTTCCTTTTCTC
TATCCCCGCCGAGTGCGCCGATGGACTCCGGTCTGCTTCAGGTGAACATTGTTGATGCGTCTCCTTGCTTTGCTGGGAGGGTGTACGGTCCCCTCTGCTTGCAGAGGAAG
AAACTCTTGGCTTCTAAGTCGTTGTGGTTCCTCAGTTCTAATCCGACGAATTTGACCCCCGATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGGGATGAATTGTAGA
TGTTCGAATGAATGGAATAGTTTTCAACCTGTGAATCGATGTCTTCCTTGTGAAATTAGTGTCAATGTGCAATACATGATACCTTTTGTAGGTAGTGCTTGATGGACTAT
ATGAAAAAATTTCTTGATTTTAACGGAATTGAGATAATAAGATCTGCC
Protein sequenceShow/hide protein sequence
MNRRSRPFPRSPKSHSETFHRYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSFSLSPPSAPMDSGLLQVNIVDASPCFAGRVYGPLCLQRKKLLASKSLWFLSSNPTN
LTPDSPPDPVIEVLGG