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Tan0013870 (gene) of Snake gourd v1 genome

Gene IDTan0013870
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:9145597..9147901
RNA-Seq ExpressionTan0013870
SyntenyTan0013870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONK73932.1 uncharacterized protein A4U43_C03F1060 [Asparagus officinalis]2.8e-0437.41Show/hide
Query:  DLQRPDRFVVRSAPSIHVIEVFFHDDVAILQHDQEIEGGGGGGEEIQRVEADLPVQDVVTGDGGGVSEACVFGEKIVVGLEK-LLGYGDVLVEVLLVRLV
        DLQ PDR V+  A  +  I+    DD A L +D+ I+G G GG        D P +DVV G GG V  A V  E+   G+E+  LG  D + EV+LVRLV
Subjt:  DLQRPDRFVVRSAPSIHVIEVFFHDDVAILQHDQEIEGGGGGGEEIQRVEADLPVQDVVTGDGGGVSEACVFGEKIVVGLEK-LLGYGDVLVEVLLVRLV

Query:  VIDAQNREERLQGATMKTLERKGGVDEAPRSVRVVGAKSQPSPPQIC
         ID ++       A +   E  GG+ E+     V    + P P Q C
Subjt:  VIDAQNREERLQGATMKTLERKGGVDEAPRSVRVVGAKSQPSPPQIC
TrEMBL top hitse value%identityAlignment
A0A5P1F6X6 Uncharacterized protein1.4e-0437.41Show/hide
Query:  DLQRPDRFVVRSAPSIHVIEVFFHDDVAILQHDQEIEGGGGGGEEIQRVEADLPVQDVVTGDGGGVSEACVFGEKIVVGLEK-LLGYGDVLVEVLLVRLV
        DLQ PDR V+  A  +  I+    DD A L +D+ I+G G GG        D P +DVV G GG V  A V  E+   G+E+  LG  D + EV+LVRLV
Subjt:  DLQRPDRFVVRSAPSIHVIEVFFHDDVAILQHDQEIEGGGGGGEEIQRVEADLPVQDVVTGDGGGVSEACVFGEKIVVGLEK-LLGYGDVLVEVLLVRLV

Query:  VIDAQNREERLQGATMKTLERKGGVDEAPRSVRVVGAKSQPSPPQIC
         ID ++       A +   E  GG+ E+     V    + P P Q C
Subjt:  VIDAQNREERLQGATMKTLERKGGVDEAPRSVRVVGAKSQPSPPQIC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATGACGGATCTCCAGCGACCCGATCGATTTGTTGTTCGCTCTGCACCTTCAATACACGTAATCGAGGTGTTCTTCCACGACGATGTAGCAATCCTGCAGCACGA
TCAAGAAATCGAGGGCGGCGGCGGCGGTGGAGAAGAGATTCAGAGAGTGGAGGCGGATCTCCCAGTACAAGACGTAGTGACTGGGGATGGAGGAGGTGTCAGTGAAGCTT
GTGTATTCGGCGAGAAGATCGTTGTAGGGCTCGAGAAGCTTCTTGGCTATGGCGATGTTCTTGTGGAGGTCTTGCTCGTTCGCCTTGTCGTTATCGATGCTCAGAACCGT
GAGGAGCGATTGCAAGGAGCAACGATGAAAACTCTGGAAAGAAAAGGAGGCGTGGACGAGGCTCCACGATCGGTGCGCGTCGTCGGAGCCAAATCGCAACCATCGCCGCC
ACAAATCTGCATGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGATGACGGATCTCCAGCGACCCGATCGATTTGTTGTTCGCTCTGCACCTTCAATACACGTAATCGAGGTGTTCTTCCACGACGATGTAGCAATCCTGCAGCACGA
TCAAGAAATCGAGGGCGGCGGCGGCGGTGGAGAAGAGATTCAGAGAGTGGAGGCGGATCTCCCAGTACAAGACGTAGTGACTGGGGATGGAGGAGGTGTCAGTGAAGCTT
GTGTATTCGGCGAGAAGATCGTTGTAGGGCTCGAGAAGCTTCTTGGCTATGGCGATGTTCTTGTGGAGGTCTTGCTCGTTCGCCTTGTCGTTATCGATGCTCAGAACCGT
GAGGAGCGATTGCAAGGAGCAACGATGAAAACTCTGGAAAGAAAAGGAGGCGTGGACGAGGCTCCACGATCGGTGCGCGTCGTCGGAGCCAAATCGCAACCATCGCCGCC
ACAAATCTGCATGAGCTGA
Protein sequenceShow/hide protein sequence
MRMTDLQRPDRFVVRSAPSIHVIEVFFHDDVAILQHDQEIEGGGGGGEEIQRVEADLPVQDVVTGDGGGVSEACVFGEKIVVGLEKLLGYGDVLVEVLLVRLVVIDAQNR
EERLQGATMKTLERKGGVDEAPRSVRVVGAKSQPSPPQICMS