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Tan0013874 (gene) of Snake gourd v1 genome

Gene IDTan0013874
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG09:52554036..52554994
RNA-Seq ExpressionTan0013874
SyntenyTan0013874
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3946792.1 hypothetical protein CMV_026980 [Castanea mollissima]2.1e-1240.96Show/hide
Query:  VQPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESW
        V P K+ F+ + FW++ +N+P+  M  EV   +  ++GE++ +D   SG +WG F+ +RV IDITKPL  G MI++ED    W
Subjt:  VQPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESW

TXG49311.1 hypothetical protein EZV62_025186 [Acer yangbiense]9.5e-1034.62Show/hide
Query:  LKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES-----------------------
        LKF   DFWVQ  N+PL  M  E+ + LG  +GE+ E+D    G   G FV +RV +DITKPLR  + + V  +GE                        
Subjt:  LKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES-----------------------

Query:  -----------WYGMWMRIVEFKKYVGHKTEETKHNGLGSGRTTERGRRGFGRTHN
                    YG+WMR V   K VG++     HN LG+ R    G  G GR  N
Subjt:  -----------WYGMWMRIVEFKKYVGHKTEETKHNGLGSGRTTERGRRGFGRTHN

TXG52368.1 hypothetical protein EZV62_021537 [Acer yangbiense]3.9e-1138.74Show/hide
Query:  EKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESWYGMWMRIVEFKKY------V
        E LKFS ADFWVQ + +P+  M  E+ R LG  IGE+L+ID  +SG   G F+ +R+R+DITKPL+  + + +  +G     M +R      +      +
Subjt:  EKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESWYGMWMRIVEFKKY------V

Query:  GHKTEETKHNG
         H T E K  G
Subjt:  GHKTEETKHNG

XP_023912309.1 uncharacterized protein At4g02000-like [Quercus suber]9.5e-1037.04Show/hide
Query:  PEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESW
        P+++K  +  FWVQ YN+PL  M  E    +G ++G++LE+D++  G  WG F+ +R+RID+T+ L  G  + +E     W
Subjt:  PEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESW

XP_030936068.1 uncharacterized protein LOC115961187 [Quercus lobata]7.3e-1041.46Show/hide
Query:  QPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESW
        +P+ L F +  FWVQ YN+PL +   E    +G  +GE+LE+D++ SG  WG  + +RV+ID+TK L  G   KVE+  + W
Subjt:  QPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESW

TrEMBL top hitse value%identityAlignment
A0A2N9EDG5 CCHC-type domain-containing protein1.9e-1140.96Show/hide
Query:  VQPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESW
        +QP  +KF ++ FW++ YN+P+  M  EV   +G  IG ++E+D+  +G  WG F+ IRV ID+TKPL  G +++ ED    W
Subjt:  VQPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESW

A0A2N9EN16 CCHC-type domain-containing protein1.9e-1140.48Show/hide
Query:  VQPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGI-WGHFVPIRVRIDITKPLRIGVMIKVEDEGESW
        +QP  +KF+   FW++  N+P+  M  EV   +G+E+G++L++D+ +  GI WG F+ IRV ++I KPL  G +I+VED+  +W
Subjt:  VQPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGI-WGHFVPIRVRIDITKPLRIGVMIKVEDEGESW

A0A2N9I946 Uncharacterized protein1.9e-1140.48Show/hide
Query:  VQPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGI-WGHFVPIRVRIDITKPLRIGVMIKVEDEGESW
        +QP  +KF+   FW++  N+P+  M  EV   +G+E+G++L++D+ +  GI WG F+ IRV ++I KPL  G +I+VED+  +W
Subjt:  VQPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGI-WGHFVPIRVRIDITKPLRIGVMIKVEDEGESW

A0A2N9J936 Uncharacterized protein1.9e-1140.48Show/hide
Query:  VQPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGI-WGHFVPIRVRIDITKPLRIGVMIKVEDEGESW
        +QP  +KF+   FW++  N+P+  M  EV   +G+E+G++L++D+ +  GI WG F+ IRV ++I KPL  G +I+VED+  +W
Subjt:  VQPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGI-WGHFVPIRVRIDITKPLRIGVMIKVEDEGESW

A0A5C7H5N9 Uncharacterized protein1.9e-1138.74Show/hide
Query:  EKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESWYGMWMRIVEFKKY------V
        E LKFS ADFWVQ + +P+  M  E+ R LG  IGE+L+ID  +SG   G F+ +R+R+DITKPL+  + + +  +G     M +R      +      +
Subjt:  EKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESWYGMWMRIVEFKKY------V

Query:  GHKTEETKHNG
         H T E K  G
Subjt:  GHKTEETKHNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02103.1 unknown protein1.5e-0532.39Show/hide
Query:  DFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES
        D WVQ   +PL Y+ +E +  +  ++GEI+ +D   +      F+ +RVR  IT  LR    + + D GE+
Subjt:  DFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES

AT2G17920.1 nucleic acid binding;zinc ion binding4.0e-0635.21Show/hide
Query:  DFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES
        D WVQ   +P  Y+ +E    + QEIG I+ +D   +      ++ +RVR+ IT  LR    I  E  GES
Subjt:  DFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES

AT2G41590.1 unknown protein1.4e-0636.62Show/hide
Query:  DFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES
        D WVQ   +PL Y+ +E +  + Q++GE+L +D   +  I   ++ +RVR  IT  LR    I V D GE+
Subjt:  DFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES

AT5G18636.1 unknown protein4.0e-0635.21Show/hide
Query:  DFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES
        D WVQ   +PL Y+ +E +  + Q++GEI+ +D   +      F+ +RVR  IT  LR    I + D GE+
Subjt:  DFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES

AT5G25200.1 unknown protein4.0e-0635.21Show/hide
Query:  DFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES
        D WVQ   +PL Y+ +E +  + Q++GEI+ +D   +      F+ +RVR  IT  LR    I + D GE+
Subjt:  DFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTCAACTGATTACAGAGAAGTGGAAAACACTGAAGTTAACTTCGGAAGAACAACAGGTTACTAGTCTGGTGGTTCAACCAGAAAAACTAAAGTTTAGTTTTGC
TGACTTCTGGGTCCAATTCTACAATGTTCCTTTATTTTATATGGAGGACGAAGTTCTTAGAACTTTAGGCCAGGAGATTGGGGAGATTTTAGAGATAGACTTATCCAGTT
CAGGAGGAATCTGGGGGCATTTTGTTCCGATCAGAGTAAGGATTGATATCACAAAACCACTTCGGATAGGGGTTATGATCAAAGTAGAGGATGAAGGGGAGTCATGGTAT
GGTATGTGGATGAGGATAGTAGAGTTCAAAAAATATGTGGGGCATAAAACTGAGGAAACAAAGCATAATGGCTTGGGCTCGGGGAGAACGACAGAGAGAGGTCGTAGGGG
ATTTGGGAGGACCCATAATGTTGGTACAAAAAGGGACTGGTGGAGGAAACCGGGGTATGATGATGAAGCTTCTTCGTCGGAAAGTAATTCTGGTGATGCAGGGGAGCCGG
CGGACGAGGGACAACCCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACATTCAACTGATTACAGAGAAGTGGAAAACACTGAAGTTAACTTCGGAAGAACAACAGGTTACTAGTCTGGTGGTTCAACCAGAAAAACTAAAGTTTAGTTTTGC
TGACTTCTGGGTCCAATTCTACAATGTTCCTTTATTTTATATGGAGGACGAAGTTCTTAGAACTTTAGGCCAGGAGATTGGGGAGATTTTAGAGATAGACTTATCCAGTT
CAGGAGGAATCTGGGGGCATTTTGTTCCGATCAGAGTAAGGATTGATATCACAAAACCACTTCGGATAGGGGTTATGATCAAAGTAGAGGATGAAGGGGAGTCATGGTAT
GGTATGTGGATGAGGATAGTAGAGTTCAAAAAATATGTGGGGCATAAAACTGAGGAAACAAAGCATAATGGCTTGGGCTCGGGGAGAACGACAGAGAGAGGTCGTAGGGG
ATTTGGGAGGACCCATAATGTTGGTACAAAAAGGGACTGGTGGAGGAAACCGGGGTATGATGATGAAGCTTCTTCGTCGGAAAGTAATTCTGGTGATGCAGGGGAGCCGG
CGGACGAGGGACAACCCTCATAA
Protein sequenceShow/hide protein sequence
MDIQLITEKWKTLKLTSEEQQVTSLVVQPEKLKFSFADFWVQFYNVPLFYMEDEVLRTLGQEIGEILEIDLSSSGGIWGHFVPIRVRIDITKPLRIGVMIKVEDEGESWY
GMWMRIVEFKKYVGHKTEETKHNGLGSGRTTERGRRGFGRTHNVGTKRDWWRKPGYDDEASSSESNSGDAGEPADEGQPS