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Tan0013891 (gene) of Snake gourd v1 genome

Gene IDTan0013891
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMyelin transcription factor 1-like protein
Genome locationLG09:72965346..72965750
RNA-Seq ExpressionTan0013891
SyntenyTan0013891
Gene Ontology termsGO:0070125 - mitochondrial translational elongation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587442.1 Serine/threonine-protein kinase STY46, partial [Cucurbita argyrosperma subsp. sororia]4.0e-3984.43Show/hide
Query:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK
        MSTP     T A+LL  +FLLLSGSCIVV N DLMGRWVPIVGLLVV GVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYLGAVLVK
Subjt:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK

Query:  ERGLLAVAFAAVFSFVAVVRST
        ERGL+AVAFAAV SF AV+ ST
Subjt:  ERGLLAVAFAAVFSFVAVVRST

KAG7021425.1 hypothetical protein SDJN02_15150, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4285.27Show/hide
Query:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK
        MSTP     T A+LL  +FLLLSGSCIVV N DLMGRWVPIVGLLVV GVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYLGAVLVK
Subjt:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK

Query:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV
        ERGL+AVAFAAV SF AVVRS EID LSV
Subjt:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV

XP_022933693.1 uncharacterized protein LOC111441029 [Cucurbita moschata]5.1e-4284.5Show/hide
Query:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK
        MSTP     T A+LL  +FLLLSGSCIVV N DLMGRWVPIVGLLVV GVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYLGAVLVK
Subjt:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK

Query:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV
        ERGL+AV FAAV S VAVVRS EID LSV
Subjt:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV

XP_023004957.1 uncharacterized protein LOC111498104 [Cucurbita maxima]6.0e-4386.05Show/hide
Query:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK
        MSTPA    T A+LL  +FLLLSGSCIVV N DLMGRWVPIVGLLVV GVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYL AVLVK
Subjt:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK

Query:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV
        ERGL+AVAFAAV SFVAVVRS EID LSV
Subjt:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV

XP_023530771.1 uncharacterized protein LOC111793221 [Cucurbita pepo subsp. pepo]3.5e-4386.05Show/hide
Query:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK
        MSTP     T A+LL  +FLLLSGSCIVV N DLMGRWVPIVGLLVV GVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYLGAVLVK
Subjt:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK

Query:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV
        ERGL+AVAFAAV SFVAVVRS EID LSV
Subjt:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV

TrEMBL top hitse value%identityAlignment
A0A0A0LNT4 Uncharacterized protein8.5e-3575.2Show/hide
Query:  ATATSTAAILLLAMFLLLSGSCIVVFNCD-LMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKERG
        ATATS       A+F+LLSG C +VFN D LMGRW+PI+GLL V  V ++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V+VKERG
Subjt:  ATATSTAAILLLAMFLLLSGSCIVVFNCD-LMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKERG

Query:  LLAVAFAAVFSFVAVVRSTEIDPLS
        LLAVAFAA+FSF+AV+RSTEID LS
Subjt:  LLAVAFAAVFSFVAVVRSTEIDPLS

A0A0A0LRZ2 Uncharacterized protein3.5e-3675.19Show/hide
Query:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCD-LMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLV
        M TP TAT+T+AI     F+LLSG C +VFN D LMGRW+PI+GLL V  VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V+V
Subjt:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCD-LMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLV

Query:  KERGLLAVAFAAVFSFVAVVRSTEIDPLS
        KERGLLAVAFAA+FSF+AV+RSTEI  LS
Subjt:  KERGLLAVAFAAVFSFVAVVRSTEIDPLS

A0A5D3BFC5 Uncharacterized protein5.7e-3977.86Show/hide
Query:  RRMSTPATATSTAAILLLAMFLLLSGSCIVVFNCD-LMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAV
        R M TP TAT+T+AI     F+LLSG C VVFN D LMGRW+PI+GLL V GVA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V
Subjt:  RRMSTPATATSTAAILLLAMFLLLSGSCIVVFNCD-LMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAV

Query:  LVKERGLLAVAFAAVFSFVAVVRSTEIDPLS
        +VKERGLLAVAFAA+FSFVAV RSTEID LS
Subjt:  LVKERGLLAVAFAAVFSFVAVVRSTEIDPLS

A0A6J1F5J3 uncharacterized protein LOC1114410292.5e-4284.5Show/hide
Query:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK
        MSTP     T A+LL  +FLLLSGSCIVV N DLMGRWVPIVGLLVV GVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYLGAVLVK
Subjt:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK

Query:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV
        ERGL+AV FAAV S VAVVRS EID LSV
Subjt:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV

A0A6J1KRU7 uncharacterized protein LOC1114981042.9e-4386.05Show/hide
Query:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK
        MSTPA    T A+LL  +FLLLSGSCIVV N DLMGRWVPIVGLLVV GVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYL AVLVK
Subjt:  MSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVK

Query:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV
        ERGL+AVAFAAV SFVAVVRS EID LSV
Subjt:  ERGLLAVAFAAVFSFVAVVRSTEIDPLSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03730.1 unknown protein6.3e-0641.03Show/hide
Query:  IVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKERGLLAVAFAAVFSFVAV
        + G + +   A VA  A MV WI+V+VLLAF G  RRVLV + R+IT +V  ++  VL+KE   +A   A +  F+ +
Subjt:  IVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKERGLLAVAFAAVFSFVAV

AT4G03600.1 unknown protein2.0e-0744.87Show/hide
Query:  GLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKERGLLAVAFAAVFSFVAVVR
        G + +     VA  A MV WI+V+VLLAF G  RRVLV +GR+IT +V  ++  VL+KE G +  AF AV ++  ++R
Subjt:  GLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKERGLLAVAFAAVFSFVAVVR

AT4G28330.1 unknown protein1.2e-0435.53Show/hide
Query:  IVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKERGLLAVAFAAVFSFV
        + G+L +     +A  A +V WI+V+V +AFAG  R+ +V +GR++T ++A ++  VL+KE   +A+  A +  FV
Subjt:  IVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKERGLLAVAFAAVFSFV

AT4G28340.1 unknown protein5.9e-0434.21Show/hide
Query:  IVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKERGLLAVAFAAVFSFV
        + G+L +     +A  A +V WI+V+V +AF    R+ +V +GR++T ++A Y+  VL+KE   +A+  A +  FV
Subjt:  IVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKERGLLAVAFAAVFSFV

AT5G50175.1 unknown protein1.3e-1174Show/hide
Query:  VVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKE
        V AARATMVAWITVLVLLAF+G RRRVL ++G+ ITADVAM L  VL++E
Subjt:  VVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGCAGAAGAATGTCCACACCGGCGACGGCGACGTCGACGGCGGCGATTTTGTTGTTGGCGATGTTTCTGTTGCTTTCAGGTTCGTGTATTGTCGTTTTTAATTG
TGATTTGATGGGGCGATGGGTACCGATTGTGGGGTTGTTGGTGGTTACCGGAGTGGCGGTGGTGGCGGCGAGGGCCACTATGGTGGCGTGGATCACGGTGTTGGTGCTGT
TGGCGTTCGCCGGAAACCGGCGGCGGGTTCTGGTCAAACAGGGAAGACGGATCACCGCCGATGTAGCCATGTACTTGGGCGCCGTGTTGGTTAAAGAAAGAGGGCTTCTT
GCTGTTGCTTTCGCCGCCGTCTTCAGCTTCGTCGCCGTCGTTCGCTCGACGGAGATCGATCCACTTTCTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGCAGAAGAATGTCCACACCGGCGACGGCGACGTCGACGGCGGCGATTTTGTTGTTGGCGATGTTTCTGTTGCTTTCAGGTTCGTGTATTGTCGTTTTTAATTG
TGATTTGATGGGGCGATGGGTACCGATTGTGGGGTTGTTGGTGGTTACCGGAGTGGCGGTGGTGGCGGCGAGGGCCACTATGGTGGCGTGGATCACGGTGTTGGTGCTGT
TGGCGTTCGCCGGAAACCGGCGGCGGGTTCTGGTCAAACAGGGAAGACGGATCACCGCCGATGTAGCCATGTACTTGGGCGCCGTGTTGGTTAAAGAAAGAGGGCTTCTT
GCTGTTGCTTTCGCCGCCGTCTTCAGCTTCGTCGCCGTCGTTCGCTCGACGGAGATCGATCCACTTTCTGTTTAA
Protein sequenceShow/hide protein sequence
MKGRRMSTPATATSTAAILLLAMFLLLSGSCIVVFNCDLMGRWVPIVGLLVVTGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRRITADVAMYLGAVLVKERGLL
AVAFAAVFSFVAVVRSTEIDPLSV