; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013917 (gene) of Snake gourd v1 genome

Gene IDTan0013917
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationLG10:6184346..6184918
RNA-Seq ExpressionTan0013917
SyntenyTan0013917
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018763.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-9389.58Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKH--ESQCISFPITFSCRTFLPFEGEILHGVVRHIFR
        MFCEVELVRDVEV  EKEK DG+N QRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGE+K+  ESQC+SFPITF CRTFLP EGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKH--ESQCISFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN +LGPIS SDSDE DL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL

XP_004134101.1 DNA-directed RNA polymerase V subunit 7 [Cucumis sativus]3.1e-9389.47Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF EVELVRDVE+  EKEK D  NFQRYIITCLLENLLKEKA+KDHGYFL+VTSL+SIGKG +K+ESQC+SFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL
        LLLKCGPIKYVFLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNN+LGPISLSDSDE DL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL

XP_022924760.1 DNA-directed RNA polymerase V subunit 7-like [Cucurbita moschata]4.8e-9490.1Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKH--ESQCISFPITFSCRTFLPFEGEILHGVVRHIFR
        MFCEVELVRDVEV  EKEK DG+N QRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGE+K+  ESQC+SFPITFSCRTFLP EGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKH--ESQCISFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN +LGPIS SDSDE DL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL

XP_038877102.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Benincasa hispida]1.8e-9391.4Show/hide
Query:  VELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRGLLLK
        VELV+DVE+ AEKEK D LNFQRYIITCLLENLLKEKA+KDHGYFLAVTSLKSIGKG +  +SQC+SFPITFSCRTFLPFEGEILHGVV HIFRRGLLLK
Subjt:  VELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRGLLLK

Query:  CGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL
        CGPIKYVFLSA KMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNN+LGPISLSDSDE DL
Subjt:  CGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL

XP_038877103.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Benincasa hispida]4.3e-9591.05Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF EVELV+DVE+ AEKEK D LNFQRYIITCLLENLLKEKA+KDHGYFLAVTSLKSIGKG +  +SQC+SFPITFSCRTFLPFEGEILHGVV HIFRRG
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL
        LLLKCGPIKYVFLSA KMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNN+LGPISLSDSDE DL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL

TrEMBL top hitse value%identityAlignment
A0A0A0L5A3 Uncharacterized protein1.5e-9389.47Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF EVELVRDVE+  EKEK D  NFQRYIITCLLENLLKEKA+KDHGYFL+VTSL+SIGKG +K+ESQC+SFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL
        LLLKCGPIKYVFLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNN+LGPISLSDSDE DL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL

A0A1S3AWE2 DNA-directed RNA polymerase V subunit 7-like1.5e-9389.47Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF EVELVRDVE+  EKEK D  NFQRYIITCLLENLLKEKA+KDHGYFL+VTSLKSIGKG +K+ESQC+SFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL
        LLLKCGPIKY FLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNN+LGPISLSDSDE DL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL

A0A5A7U0C3 DNA-directed RNA polymerase V subunit 7-like1.5e-9389.47Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF EVELVRDVE+  EKEK D  NFQRYIITCLLENLLKEKA+KDHGYFL+VTSLKSIGKG +K+ESQC+SFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL
        LLLKCGPIKY FLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNN+LGPISLSDSDE DL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL

A0A6J1EFY9 DNA-directed RNA polymerase V subunit 7-like2.3e-9490.1Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKH--ESQCISFPITFSCRTFLPFEGEILHGVVRHIFR
        MFCEVELVRDVEV  EKEK DG+N QRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGE+K+  ESQC+SFPITFSCRTFLP EGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKH--ESQCISFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN +LGPIS SDSDE DL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL

A0A6J1IQI7 DNA-directed RNA polymerase V subunit 7-like isoform X15.7e-9389.06Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKH--ESQCISFPITFSCRTFLPFEGEILHGVVRHIFR
        MFCEVELVR+VEV  EKEK DG+N QRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK E+K+  ESQC+SFPITFSCRTFLP EGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKH--ESQCISFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN +LGPISLSDSDE DL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 71.5e-3743.09Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  +V + AE   + GL  +R I+  LLE    +KA+K+ GY++AVT+L  IG+G+I+  +  + FP+ FS  TF  F+GEI+HGVV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPIS
        + ++CGPI+ V+LS  KMP Y Y+ GENP+F + + + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPIS

P38421 DNA-directed RNA polymerase II subunit 72.5e-1327.1Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF  + L R++++     +  G N +  +++ L+++ ++   S  HG+ +A+T + +IGKG I+  +  ++FP+ + C  F PF+GEIL  VV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR
           + GP++ +F+S   +P    +  G+ P +++++ +  I  +  VR  ++G R
Subjt:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR

P46279 DNA-directed RNA polymerase II subunit RPB78.7e-1428.39Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF  + L R++++     +  G N +  +++ L+++ ++   S  HG+ +AVT +++IGKG I+  +  ++FP+ + C  F PF+GEIL  VV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR
           + GP++ +F+S   +P    +  G+ P +++++ +  I  D  VR  ++G R
Subjt:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein2.0e-3941.71Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK-------GEIKHESQCISFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV + A  +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG         E  H+++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK-------GEIKHESQCISFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN + GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDE

Q8LE42 DNA-directed RNA polymerase IV subunit 74.9e-3343.58Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  DV + AE +   GL  QR I+  LLE   KEKA+KD GY +  T L++IG+G+IK ++  I FP+ F+   F  F+GEI+HGVV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGP
        + LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain3.5e-3443.58Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  DV + AE +   GL  QR I+  LLE   KEKA+KD GY +  T L++IG+G+IK ++  I FP+ F+   F  F+GEI+HGVV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGP
        + LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGP

AT4G14520.1 DNA-directed RNA polymerase II-related1.5e-4041.71Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK-------GEIKHESQCISFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV + A  +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG         E  H+++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK-------GEIKHESQCISFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN + GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDE

AT4G14520.2 DNA-directed RNA polymerase II-related1.5e-4041.71Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK-------GEIKHESQCISFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV + A  +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG         E  H+++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK-------GEIKHESQCISFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN + GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDE

AT4G14520.3 DNA-directed RNA polymerase II-related1.5e-4041.71Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK-------GEIKHESQCISFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV + A  +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG         E  H+++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK-------GEIKHESQCISFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN + GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDE

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain1.0e-3843.09Show/hide
Query:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  +V + AE   + GL  +R I+  LLE    +KA+K+ GY++AVT+L  IG+G+I+  +  + FP+ FS  TF  F+GEI+HGVV  + + G
Subjt:  MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPIS
        + ++CGPI+ V+LS  KMP Y Y+ GENP+F + + + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGGAAGTCATGGCCGAAAAGGAAAAGAGTGATGGTCTCAACTTCCAAAGGTACATTATAACATGTCTATTAGAAAACCT
GTTGAAGGAGAAGGCCAGCAAAGACCATGGCTATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGAGAGATAAAGCATGAGTCTCAATGTATTTCATTCCCCA
TTACCTTTAGTTGCCGAACCTTTCTCCCATTCGAGGGAGAGATCTTACATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTAT
GTGTTTCTTTCAGCTCGTAAAATGCCAACCTACCATTATGTTGGTGGTGAAAATCCTGTTTTCTCGAGCAACGAATTTGCAACGATTGGAAACGACGTCGTTGTACGGTT
CAGTGTGCTCGGTGTGAGATGGATAGAAAAAAGAGGATGTATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACACACTTGGACCTATTTCATTGTCCG
ACTCCGATGAGTGTGACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGGAAGTCATGGCCGAAAAGGAAAAGAGTGATGGTCTCAACTTCCAAAGGTACATTATAACATGTCTATTAGAAAACCT
GTTGAAGGAGAAGGCCAGCAAAGACCATGGCTATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGAGAGATAAAGCATGAGTCTCAATGTATTTCATTCCCCA
TTACCTTTAGTTGCCGAACCTTTCTCCCATTCGAGGGAGAGATCTTACATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTAT
GTGTTTCTTTCAGCTCGTAAAATGCCAACCTACCATTATGTTGGTGGTGAAAATCCTGTTTTCTCGAGCAACGAATTTGCAACGATTGGAAACGACGTCGTTGTACGGTT
CAGTGTGCTCGGTGTGAGATGGATAGAAAAAAGAGGATGTATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACACACTTGGACCTATTTCATTGTCCG
ACTCCGATGAGTGTGACTTGTAA
Protein sequenceShow/hide protein sequence
MFCEVELVRDVEVMAEKEKSDGLNFQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEIKHESQCISFPITFSCRTFLPFEGEILHGVVRHIFRRGLLLKCGPIKY
VFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNTLGPISLSDSDECDL