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Tan0013933 (gene) of Snake gourd v1 genome

Gene IDTan0013933
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionBromo domain-containing protein
Genome locationLG06:17503619..17509273
RNA-Seq ExpressionTan0013933
SyntenyTan0013933
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049895.1 uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa]2.0e-1874.32Show/hide
Query:  KQSSLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESERRLQESE
        K   LK  ASQV++G LDMNED+IFVQVFGPEKHG VRGYGVGVTP ELF SSS V DLE  LNE E RL ESE
Subjt:  KQSSLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESERRLQESE

KAA0056079.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa]8.8e-1978.12Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESER
        +KSYASQV+DGTLDMN+D+IFVQ+ GPEKH  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESER

XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]1.0e-1979.69Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESER
        +KSYASQV+DGTLDMN+D+IFVQ+FGPEKH  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESER

XP_023893229.1 uncharacterized protein LOC112005206 [Quercus suber]4.5e-1542.45Show/hide
Query:  SLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNV-RDLERRLNESERRLQESERQRKVEVQTLKDQIVELENRFEDRFQTM
        +L+   +QV +G L M++D++F +VFGPE+HGRVRGYG G+TP++L GSSS++  DLE+RL ESE++  E++ +   +V++LK ++ +L++  E +   M
Subjt:  SLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNV-RDLERRLNESERRLQESERQRKVEVQTLKDQIVELENRFEDRFQTM

Query:  MTEMRK
        + + R+
Subjt:  MTEMRK

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]9.3e-3775.42Show/hide
Query:  KQSSLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESERRLQESERQRK-------VEVQTLKDQIVELEN
        K S LKSYASQV+DGTLDMNEDE FV+VFGPEKHG V GYGVGVTPSELFGSSS +RD ERRLNESE+RLQE E+QRK       +EV+ LK QI ELEN
Subjt:  KQSSLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESERRLQESERQRK-------VEVQTLKDQIVELEN

Query:  RFEDRFQTMMTEMRKQFV
        RFEDRFQ MM EM K+FV
Subjt:  RFEDRFQTMMTEMRKQFV

TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968285.0e-2079.69Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESER
        +KSYASQV+DGTLDMN+D+IFVQ+FGPEKH  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESER

A0A2N9HCE0 Uncharacterized protein3.0e-1739.19Show/hide
Query:  SIFSDLLEGQPFIECNLEEVGFCKSFGVLLCLKQS----SLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLERRL
        SIF     G       L E+   +S G+ +  +      +L+S  +QV +G+L M+ED++FV+VFGPE+HGRVRGYG GVT ++L+GSSS+ + DLE+RL
Subjt:  SIFSDLLEGQPFIECNLEEVGFCKSFGVLLCLKQS----SLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLERRL

Query:  NESERRLQESERQRKVEVQTLKDQIVELENRFEDRFQTMMTEMRKQFV
         ESE+   E+  +   +V+ L++Q+++L++  E+R     T+M +Q +
Subjt:  NESERRLQESERQRKVEVQTLKDQIVELENRFEDRFQTMMTEMRKQFV

A0A2N9HCP8 Uncharacterized protein1.2e-1645.87Show/hide
Query:  SLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESERRLQESERQRKVEVQTLKDQIVELENRFEDRFQTM
        +L+S  +QV +G+L M+ED++FV+VFGPE+HGRVRGYG GVT ++L+GSSS+ + DLE+RL ESE+   E+  +   +V+ L++Q+++L++  E+R    
Subjt:  SLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESERRLQESERQRKVEVQTLKDQIVELENRFEDRFQTM

Query:  MTEMRKQFV
         T+M +Q +
Subjt:  MTEMRKQFV

A0A5A7U8E9 Uncharacterized protein9.5e-1974.32Show/hide
Query:  KQSSLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESERRLQESE
        K   LK  ASQV++G LDMNED+IFVQVFGPEKHG VRGYGVGVTP ELF SSS V DLE  LNE E RL ESE
Subjt:  KQSSLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESERRLQESE

A0A5D3BP34 Bromodomain-containing factor 1-like isoform X24.3e-1978.12Show/hide
Query:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESER
        +KSYASQV+DGTLDMN+D+IFVQ+ GPEKH  VRGYGVGV  SELFGSSS V DLERRLNES++
Subjt:  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTACAGGAGCCATGGGAGCCAATTCATGAATTTCACAAGCTCAGTCGCCGGATCTTCGCCCTCACGCCAGATCTGCTTCGACCAATCGTCGATTAGATTTCGCCC
AGTCGCACGCCGAAGAATCTTTGATGCAAATTGGAAATCGATATTTTCTGATCTTTTGGAAGGCCAACCATTTATTGAATGTAATTTGGAAGAGGTTGGGTTTTGTAAAT
CTTTTGGAGTGCTTTTATGTTTAAAACAGTCAAGTCTCAAATCATATGCTTCTCAAGTGGTTGATGGTACACTTGACATGAACGAGGACGAGATTTTTGTGCAAGTTTTT
GGACCAGAGAAGCATGGACGTGTTCGTGGCTATGGGGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCTTCCAATGTACGTGATCTTGAACGTCGTCTTAATGAGTC
AGAACGACGTCTTCAAGAATCTGAACGACAAAGAAAAGTTGAGGTACAAACCCTCAAAGATCAAATTGTTGAATTAGAAAATCGTTTTGAAGATAGATTCCAAACAATGA
TGACAGAGATGCGTAAACAATTTGTTATTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTACAGGAGCCATGGGAGCCAATTCATGAATTTCACAAGCTCAGTCGCCGGATCTTCGCCCTCACGCCAGATCTGCTTCGACCAATCGTCGATTAGATTTCGCCC
AGTCGCACGCCGAAGAATCTTTGATGCAAATTGGAAATCGATATTTTCTGATCTTTTGGAAGGCCAACCATTTATTGAATGTAATTTGGAAGAGGTTGGGTTTTGTAAAT
CTTTTGGAGTGCTTTTATGTTTAAAACAGTCAAGTCTCAAATCATATGCTTCTCAAGTGGTTGATGGTACACTTGACATGAACGAGGACGAGATTTTTGTGCAAGTTTTT
GGACCAGAGAAGCATGGACGTGTTCGTGGCTATGGGGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCTTCCAATGTACGTGATCTTGAACGTCGTCTTAATGAGTC
AGAACGACGTCTTCAAGAATCTGAACGACAAAGAAAAGTTGAGGTACAAACCCTCAAAGATCAAATTGTTGAATTAGAAAATCGTTTTGAAGATAGATTCCAAACAATGA
TGACAGAGATGCGTAAACAATTTGTTATTAATTGA
Protein sequenceShow/hide protein sequence
MRYRSHGSQFMNFTSSVAGSSPSRQICFDQSSIRFRPVARRRIFDANWKSIFSDLLEGQPFIECNLEEVGFCKSFGVLLCLKQSSLKSYASQVVDGTLDMNEDEIFVQVF
GPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESERRLQESERQRKVEVQTLKDQIVELENRFEDRFQTMMTEMRKQFVIN