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Tan0013942 (gene) of Snake gourd v1 genome

Gene IDTan0013942
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like
Genome locationLG10:22799763..22805332
RNA-Seq ExpressionTan0013942
SyntenyTan0013942
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR016464 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141152.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus]1.1e-4393.68Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKTLNP+FPILIRECSG+EPQLWARYDMG+ERVARL+GLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

XP_008465169.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo]3.9e-4494.74Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKTLNP+FPILIRECSG+EPQLWARYDMG+ERVARL+GLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

XP_022152373.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia]8.6e-4495.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRG LSKNLKELRILLCQTSPSSAPARAFVEKNYKDLK+LNP+FPILIRECSGVEPQLWARYDMGVERVARL+GLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

XP_022935669.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata]3.0e-4495.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYK+LKTLNP+FPILIRECSGVEPQLWARYDMG+ERVARL+GLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

XP_038906356.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]6.6e-4495.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPAR FVEKNYKDLKTLNP+FPILIRECSGVEPQLWARYDMGVERVARL+GLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

TrEMBL top hitse value%identityAlignment
A0A0A0LDA2 L51_S25_CI-B8 domain-containing protein5.4e-4493.68Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKTLNP+FPILIRECSG+EPQLWARYDMG+ERVARL+GLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

A0A1S3CN67 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.9e-4494.74Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKTLNP+FPILIRECSG+EPQLWARYDMG+ERVARL+GLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

A0A5A7T2I6 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 21.9e-4494.74Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLKTLNP+FPILIRECSG+EPQLWARYDMG+ERVARL+GLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

A0A6J1DEP8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 24.2e-4495.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRG LSKNLKELRILLCQTSPSSAPARAFVEKNYKDLK+LNP+FPILIRECSGVEPQLWARYDMGVERVARL+GLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

A0A6J1F628 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like1.4e-4495.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYK+LKTLNP+FPILIRECSGVEPQLWARYDMG+ERVARL+GLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

SwissProt top hitse value%identityAlignment
P0CB79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 27.6e-1952.94Show/hide
Query:  LKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY  G E+   L+  S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

P0CB80 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 27.6e-1952.94Show/hide
Query:  LKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY  G E+   L+  S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

Q02370 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 22.2e-1851.72Show/hide
Query:  RGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLV
        RG+L   L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY  G E+   L+  S  Q+++ALE+++
Subjt:  RGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLV

Q4R5E2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 28.4e-1852.5Show/hide
Query:  LKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLV
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY  G E+   L+  S  Q+++ALE+++
Subjt:  LKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLV

Q9FIJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 23.3e-3876.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQ+SP+SAP R FVEKNYKDLK+LNP+ PILIRECSGV+PQ+WARYDMGVER   LDGL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS

Arabidopsis top hitse value%identityAlignment
AT5G47890.1 NADH-ubiquinone oxidoreductase B8 subunit, putative2.3e-3976.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQ+SP+SAP R FVEKNYKDLK+LNP+ PILIRECSGV+PQ+WARYDMGVER   LDGL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGAGAGGACAGCTATCCAAAAACTTGAAGGAGCTTCGAATCTTGCTCTGCCAAACCTCTCCTTCAAGCGCCCCGGCTAGGGCGTTTGTGGAAAAGAATTACAA
GGACCTCAAGACTTTGAATCCCAGATTTCCAATATTGATCCGCGAATGCAGTGGAGTCGAGCCACAATTATGGGCTAGATATGACATGGGGGTTGAGAGGGTTGCTCGTC
TAGATGGTTTGAGCGAGGCACAGATCTCAAAGGCACTCGAAGACCTAGTTAAAGTTGGGGCATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATTGGCGAACCTGCAATTGGCAATTTGTATATGGGAGGGTGCGGGTTCATTCATCTGAGTTAGAGAGAGAGACTTCACTTGATTCACCAACACCGAGAGAGGCAGAAATG
GCATGGAGAGGACAGCTATCCAAAAACTTGAAGGAGCTTCGAATCTTGCTCTGCCAAACCTCTCCTTCAAGCGCCCCGGCTAGGGCGTTTGTGGAAAAGAATTACAAGGA
CCTCAAGACTTTGAATCCCAGATTTCCAATATTGATCCGCGAATGCAGTGGAGTCGAGCCACAATTATGGGCTAGATATGACATGGGGGTTGAGAGGGTTGCTCGTCTAG
ATGGTTTGAGCGAGGCACAGATCTCAAAGGCACTCGAAGACCTAGTTAAAGTTGGGGCATCCTGAATGAGTAATCTGCTGTGCTATTGTACTTGCAACAGACGTTAATAA
ATGCACGAGTGGAACTTTTGTTGAGATGCCTTTCTGTTTACATTCTGTTCGCTCAGCTTTTTTGAGATTATTGCTCAAATATTCAGCTTGAGAAATCATGTTTCTGGTAC
GTATGTCTATTTGTTTATATGAATAGTTTCTCCGGGGGTTATTGTCATAATGGTCATAATGAGTTTCTTATTTTTCTTATAGAATTGCTCGCATTAATTTCATAAAATTG
GACTTAGGGAAACCTTTTTCTTCTTTTTC
Protein sequenceShow/hide protein sequence
MAWRGQLSKNLKELRILLCQTSPSSAPARAFVEKNYKDLKTLNPRFPILIRECSGVEPQLWARYDMGVERVARLDGLSEAQISKALEDLVKVGAS