CuGenDBv2

Gene ID	Tan0013957
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RING-type domain-containing protein
Genome location	LG10:10868545..10869388
RNA-Seq Expression	Tan0013957
Synteny	Tan0013957
Gene Ontology terms	NA
InterPro domains	IPR001841 - Zinc finger, RING-type

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8650412.1 hypothetical protein Csa_010702 [Cucumis sativus]

7.6e-94

79.3

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Query:  MNRPHSNHLRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCP
        MNR HSNHL+SNSISHCQ+CGISQS CWILHN+R KA+FRRLCTNC LK+NLSRFCP+CFD+Y+DST PPSH RVMCFRCPSISHLSC+S RFSSTFLCP
Subjt:  MNRPHSNHLRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCP

Query:  LCSDPCFAFFNGLHSGG-LCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYAN
        LCSDP F FF+G  SGG LCQS+S VA L+G+++D KS KAIVAAAR++AQSMRRAA DARAVAEMKIKNAAFAKKQATLALE+LAYLVLQEKDKNGY+ 
Subjt:  LCSDPCFAFFNGLHSGG-LCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYAN

Query:  SNGDAVAGEMMVEES--KLQDKEVTEI
        SNGDAV  E  VEE   KLQ+K+VT I
Subjt:  SNGDAVAGEMMVEES--KLQDKEVTEI

KAG6597592.1 hypothetical protein SDJN03_10772, partial [Cucurbita argyrosperma subsp. sororia]

5.9e-94

82.81

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Query:  LRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCPLCSDPCFA
        ++SNSISHCQECGI+QSECWILHN+R+KASFRRLCTNC L+NN+SRFCPVCFD+YDDSTAPPSHQRVMCFRCPSISHLSCIS RFSSTFLCPLCSDP F 
Subjt:  LRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCPLCSDPCFA

Query:  FFNGLHSG--GLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANSNGDAVA
        FF+   SG  GLCQS+ AVA L+GRDI GKSAKA+VAAAR+AAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYL L+EKD N +ANSNGDAVA
Subjt:  FFNGLHSG--GLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANSNGDAVA

Query:  GEMMVEESKLQDKEVTEIPEP
        GEM VEE KLQD  ++ I EP
Subjt:  GEMMVEESKLQDKEVTEIPEP

XP_022943680.1 uncharacterized protein LOC111448356 [Cucurbita moschata]

5.9e-94

82.81

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Query:  LRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCPLCSDPCFA
        ++SNSISHCQECGI+QSECWILHN+R+KASFRRLCTNC L+NN+SRFCPVCFD+YDDSTAPPSHQRVMCFRCPSISHLSCIS RFSSTFLCPLCSDP F 
Subjt:  LRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCPLCSDPCFA

Query:  FFNGLHSG--GLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANSNGDAVA
        FF+   SG  GLCQS+ AVA L+GRDI GKSAKA+VAAAR+AAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYL L+EKD N +ANSNGDAVA
Subjt:  FFNGLHSG--GLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANSNGDAVA

Query:  GEMMVEESKLQDKEVTEIPEP
        GEM VEE KLQD  ++ I EP
Subjt:  GEMMVEESKLQDKEVTEIPEP

XP_023540291.1 uncharacterized protein LOC111800711 [Cucurbita pepo subsp. pepo]

5.9e-94

82.81

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Query:  LRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCPLCSDPCFA
        ++SNSISHCQECGI+QSECWILHN+R+KASFRRLCTNC L+NN+SRFCPVCFD+YDDSTAPPSHQRVMCFRCPSISHLSCIS RFSSTFLCPLCSDP F 
Subjt:  LRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCPLCSDPCFA

Query:  FFNGLHSGGL--CQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANSNGDAVA
        FF+   SGGL  CQS+ AVA L+GRDI GKSAKA+VAAAR+AAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYL L+EKD N +ANSNGDAVA
Subjt:  FFNGLHSGGL--CQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANSNGDAVA

Query:  GEMMVEESKLQDKEVTEIPEP
        GEM VEE KLQD  ++ I EP
Subjt:  GEMMVEESKLQDKEVTEIPEP

XP_038902666.1 uncharacterized protein LOC120089301 [Benincasa hispida]

8.4e-101

84.07

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Query:  MNRPHSNHLRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCP
        MNR H NHL+SNS+SHCQECGISQS CWILHN+RLKASFRRLCTNC LK+NLSRFCP+CFD+YDDST PPSHQRVMCFRCPSISHLSC S RFSSTFLCP
Subjt:  MNRPHSNHLRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCP

Query:  LCSDPCFAFFNGLHSGGLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANS
        LCSDPCFAFF+G  SGGLCQS+S VA L+ R++D KSAKAIVAAAR++AQSMRRAA DARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKD+NGYA +
Subjt:  LCSDPCFAFFNGLHSGGLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANS

Query:  NGDAVAGEMMVEE--SKLQDKEVTEI
        NGDAVAGE  VEE  SKLQ+KEVT I
Subjt:  NGDAVAGEMMVEE--SKLQDKEVTEI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5G4 Uncharacterized protein

3.7e-94

79.3

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Query:  MNRPHSNHLRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCP
        MNR HSNHL+SNSISHCQ+CGISQS CWILHN+R KA+FRRLCTNC LK+NLSRFCP+CFD+Y+DST PPSH RVMCFRCPSISHLSC+S RFSSTFLCP
Subjt:  MNRPHSNHLRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCP

Query:  LCSDPCFAFFNGLHSGG-LCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYAN
        LCSDP F FF+G  SGG LCQS+S VA L+G+++D KS KAIVAAAR++AQSMRRAA DARAVAEMKIKNAAFAKKQATLALE+LAYLVLQEKDKNGY+ 
Subjt:  LCSDPCFAFFNGLHSGG-LCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYAN

Query:  SNGDAVAGEMMVEES--KLQDKEVTEI
        SNGDAV  E  VEE   KLQ+K+VT I
Subjt:  SNGDAVAGEMMVEES--KLQDKEVTEI

A0A6J1FY52 uncharacterized protein LOC111448356

2.8e-94

82.81

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Query:  LRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCPLCSDPCFA
        ++SNSISHCQECGI+QSECWILHN+R+KASFRRLCTNC L+NN+SRFCPVCFD+YDDSTAPPSHQRVMCFRCPSISHLSCIS RFSSTFLCPLCSDP F 
Subjt:  LRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCPLCSDPCFA

Query:  FFNGLHSG--GLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANSNGDAVA
        FF+   SG  GLCQS+ AVA L+GRDI GKSAKA+VAAAR+AAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYL L+EKD N +ANSNGDAVA
Subjt:  FFNGLHSG--GLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANSNGDAVA

Query:  GEMMVEESKLQDKEVTEIPEP
        GEM VEE KLQD  ++ I EP
Subjt:  GEMMVEESKLQDKEVTEIPEP

A0A6J1GVZ7 uncharacterized protein LOC111457661

5.9e-92

79.74

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Query:  MNRPHSNHLRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCP
        MNRPH NHL+SNSIS+C ECGISQS CWILHN+R KASFRRLCTNC LKNNLSRFCP+CFDIYDDST P SHQRVMCFRCPSISH+SC S RFSSTFLCP
Subjt:  MNRPHSNHLRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCP

Query:  LCSDPCFAFFNGLHSGGLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANS
        +CSDPCFAFF+G  S GL QS+ AVAVL+GR  DGKSAKAIVAAAR+AAQSMRRAAADARAVAEMKI+NA FAKKQATLALERLA+LVLQEKD+NGYA +
Subjt:  LCSDPCFAFFNGLHSGGLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANS

Query:  NGDAVAGEM-MVEESKLQDKEVTEIPE
        NG+A AG +   EE++LQ + VT I E
Subjt:  NGDAVAGEM-MVEESKLQDKEVTEIPE

A0A6J1I928 uncharacterized protein LOC111470781

1.1e-93

82.35

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Query:  LRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCPLCSDPCFA
        ++SNSISHCQECGI+QSECWILHN+R+KASFRRLCTNC L+NN+SRFCPVCFD+YDDSTAPPSHQRVMCFRCPSISHLSCIS RFSSTFLCPLCSDP F 
Subjt:  LRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCPLCSDPCFA

Query:  FFNGLHSG--GLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANSNGDAVA
        FF+   SG  GLCQS+ AVA L+GRDI GKSAKA+VAAAR+AAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYL L+EKD N Y NSNGDAVA
Subjt:  FFNGLHSG--GLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANSNGDAVA

Query:  GEMMVEESKLQDKEVTEIPEP
        GEM VEE KLQ+  ++ I EP
Subjt:  GEMMVEESKLQDKEVTEIPEP

A0A6J1IXP5 uncharacterized protein LOC111479468

1.0e-91

79.3

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Query:  MNRPHSNHLRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCP
        MNRPH NHL+SNSIS+C ECGISQS CWILHN+R KASFRRLCTNC LKNNLSRFCP+CFDIYDDST P SHQRVMCFRCPSISH+SC S RFSSTFLCP
Subjt:  MNRPHSNHLRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCP

Query:  LCSDPCFAFFNGLHSGGLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANS
        LCSDPCFAFF+G  SG L QS+ AV+VL+GR  DGKSAKAIVAAAR+ AQSMRRAAADARAVAEMK +NA FAKKQATLALERLAYLVLQEKD+NGYA +
Subjt:  LCSDPCFAFFNGLHSGGLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANS

Query:  NGDAVAGEM-MVEESKLQDKEVTEIPE
        NG+A AG +   EE++LQ + VT I E
Subjt:  NGDAVAGEM-MVEESKLQDKEVTEIPE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G09520.1 LOCATED IN: chloroplast

4.7e-25

37.77

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Query:  SNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCF--RCPSISHLSCISLRFSSTFLCPLCSDP-CF
        +NS   C +CG   S+ W++H +RL+AS R  CT+C L+N+ + FCP CF +YD S  PPS +RV C    C S++H+ C       ++LCP C DP  F
Subjt:  SNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCF--RCPSISHLSCISLRFSSTFLCPLCSDP-CF

Query:  AFFNGLHSGGLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKN
        +FF  +           V     R +D   ++A + AA+IAA SM +A   A+   + + K AA AKK+A  ALE++  L  +EK ++
Subjt:  AFFNGLHSGGLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKN

AT3G17460.1 PHD finger family protein

5.8e-15

33.51

Show/hide

Query:  QECGI-SQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFS--------------STFLCPLC
        +EC +  + E   +H +    +FRRLCT+C LK     FC VCF+++D+  A P   R++C  CPS +HLSC +   S              S+F C  C
Subjt:  QECGI-SQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFS--------------STFLCPLC

Query:  SDPCFAFFNGLHSGGLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNG
        S+P F FF         +S     V     +  KSA A+VAA  I+  +M +A A  +  A  KI  A  AK +A  AL  L  +V+++    G
Subjt:  SDPCFAFFNGLHSGGLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATCGGCCGCACAGCAACCATCTCCGATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCCCAGTCCGAGTGCTGGATCCTCCACAATCTTCGTCTCAAAGC
GTCCTTCCGTCGTCTCTGCACCAACTGCGCCCTCAAGAACAATCTCTCCCGTTTCTGTCCCGTTTGCTTCGACATTTACGACGATTCCACTGCGCCGCCGTCTCACCAGC
GAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGTATTTCTCTTCGCTTTTCTTCTACCTTCCTGTGCCCTCTCTGCTCCGATCCTTGTTTTGCCTTCTTC
AACGGTCTTCACTCCGGCGGTCTTTGTCAATCGGACTCCGCCGTCGCTGTTTTGTCCGGCAGAGATATTGATGGTAAATCGGCTAAGGCGATTGTCGCTGCGGCTCGTAT
CGCCGCTCAATCCATGCGGAGAGCGGCGGCTGATGCTAGGGCTGTAGCGGAGATGAAAATCAAGAATGCTGCGTTTGCTAAGAAGCAGGCTACTCTCGCATTGGAGCGAC
TTGCTTATCTTGTGCTACAGGAGAAAGATAAAAATGGATATGCTAATAGTAATGGAGATGCTGTTGCTGGTGAGATGATGGTGGAAGAATCCAAGTTGCAGGACAAGGAG
GTAACTGAGATTCCCGAGCCTTATTTTGACGAAAGTAGCTGA

mRNA sequence

Show/hide mRNA sequence

ATTTTTCTGAAATTTCCTTTGAAGTCTCTCTCTTCTTCAAGGTTTTGAGCCTCAGCGACCCGTCGTTTGGCTTCTCTCTCCTGCTCCCATTCTAGGGTTTCTGTTCCGGC
GAATGCTGTTCCTCCTCCTCCGATGAATCGGCCGCACAGCAACCATCTCCGATCCAATTCCATTTCTCACTGCCAAGAATGCGGCATCTCCCAGTCCGAGTGCTGGATCC
TCCACAATCTTCGTCTCAAAGCGTCCTTCCGTCGTCTCTGCACCAACTGCGCCCTCAAGAACAATCTCTCCCGTTTCTGTCCCGTTTGCTTCGACATTTACGACGATTCC
ACTGCGCCGCCGTCTCACCAGCGAGTTATGTGCTTCAGATGCCCTTCAATCTCTCATCTCTCTTGTATTTCTCTTCGCTTTTCTTCTACCTTCCTGTGCCCTCTCTGCTC
CGATCCTTGTTTTGCCTTCTTCAACGGTCTTCACTCCGGCGGTCTTTGTCAATCGGACTCCGCCGTCGCTGTTTTGTCCGGCAGAGATATTGATGGTAAATCGGCTAAGG
CGATTGTCGCTGCGGCTCGTATCGCCGCTCAATCCATGCGGAGAGCGGCGGCTGATGCTAGGGCTGTAGCGGAGATGAAAATCAAGAATGCTGCGTTTGCTAAGAAGCAG
GCTACTCTCGCATTGGAGCGACTTGCTTATCTTGTGCTACAGGAGAAAGATAAAAATGGATATGCTAATAGTAATGGAGATGCTGTTGCTGGTGAGATGATGGTGGAAGA
ATCCAAGTTGCAGGACAAGGAGGTAACTGAGATTCCCGAGCCTTATTTTGACGAAAGTAGCTGATTAAGGAAAC

Protein sequence

Show/hide protein sequence

MNRPHSNHLRSNSISHCQECGISQSECWILHNLRLKASFRRLCTNCALKNNLSRFCPVCFDIYDDSTAPPSHQRVMCFRCPSISHLSCISLRFSSTFLCPLCSDPCFAFF
NGLHSGGLCQSDSAVAVLSGRDIDGKSAKAIVAAARIAAQSMRRAAADARAVAEMKIKNAAFAKKQATLALERLAYLVLQEKDKNGYANSNGDAVAGEMMVEESKLQDKE
VTEIPEPYFDESS

Tan0013957 (gene) of Snake gourd v1 genome