; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013973 (gene) of Snake gourd v1 genome

Gene IDTan0013973
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L44
Genome locationLG04:82286183..82287279
RNA-Seq ExpressionTan0013973
SyntenyTan0013973
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR040411 - Uncharacterized protein At5g23160-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052773.1 60S ribosomal protein L44 [Cucumis melo var. makuwa]1.3e-4854.55Show/hide
Query:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI
        MA+SS K  PSK P  F   CF SS +   +K  +   R RR  SL FRFKKSSATVPVD     +  P  D+ SFSP FKKPPP   IT +A  V GEI
Subjt:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI

Query:  V-----ESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP------KTSEKTPTNSPAKKFDPVI
        V     ES+KPSQTRKK ESTQSN T ++L P ++ AA  H+VS PS+ L RQ D K++VS HLP  AAVA T P      K + K  TN P K  D VI
Subjt:  V-----ESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP------KTSEKTPTNSPAKKFDPVI

Query:  VIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRER
        ++V VAI+VLWGRLCA LCT ALFYL RR+ SE+E  GG  R
Subjt:  VIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRER

KAG6606901.1 60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia]1.7e-8069.92Show/hide
Query:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI
        MAE+S+K+SPSKRPL+F LRCFGSSP+ +T+KNP TGR   RIPS RFRFKKSSATVP+D AVPEITVPCDDKASFSP FKKPPP P I SRA  V  +I
Subjt:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI

Query:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPTLP---KTSEKTPTNSPAKKFDPVIVIVAVAIVV
        VE IKPSQT KKTEST+ +S    L PAKRTAAL H++SLPSRRLNRQ DLKKTVSHL +     PT     K ++K P NSPAK  D +IVIVAVAIVV
Subjt:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPTLP---KTSEKTPTNSPAKKFDPVIVIVAVAIVV

Query:  LWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKI
        LWG+LCA LCT ALFY  RRL SE E +GG E RVLNR+G+GFGK+
Subjt:  LWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKI

KGN58547.1 hypothetical protein Csa_002056 [Cucumis sativus]4.9e-5154.15Show/hide
Query:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI
        MA+SS+ I PSK PL+F   CF SS +  T+K  +   R RR  S  FRFKKSSATVPVD     +  P  D+ SF P FKK PP   I  +A  V GEI
Subjt:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI

Query:  V--ESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP------KTSEKTPTNSPAKKFDPVIVIV
        V   S+KPSQTRKK  STQSN T ++L P ++TAAL H+VSLPS++L RQ   KK VS HLP  AAVA T P      K + K PT  P K FD VI++V
Subjt:  V--ESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP------KTSEKTPTNSPAKKFDPVIVIV

Query:  AVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS
         VAIV+LWGRLCA LCT ALFYL RR+ SE+EPDGG         G+G G++S
Subjt:  AVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS

XP_022949237.1 uncharacterized protein LOC111452650 [Cucurbita moschata]1.9e-7969.23Show/hide
Query:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI
        MAE+S+K+SPSKRPL+F LRCFGSSP+ +T+KNP TGRR  RIPS RFRFKKSSATVP+D AVPEITVPCDDKASFSP FKKPPP P I SRA  V  +I
Subjt:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI

Query:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPTLP---KTSEKTPTNSPAKKFDPVIVIVAVAIVV
        VE IKPSQ  KKTEST+S    + L PAKRTAAL H++SLPSRRLNRQ D KKTVSHL +     PT     K ++K P NSPAK  D +IVIVAVAIVV
Subjt:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPTLP---KTSEKTPTNSPAKKFDPVIVIVAVAIVV

Query:  LWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS
        LWG+LCA LCT ALFY  RRL SE E +GG E RVLNR+G+GF K+S
Subjt:  LWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS

XP_022982640.1 uncharacterized protein LOC111481455 [Cucurbita maxima]3.1e-4553.23Show/hide
Query:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI
        MAESSD     K  L+F  RCF SSP  + QK        RR PSLRFRFKK SATVP+D+A     VPC D+ SFSP F  PPPP  I    +   G  
Subjt:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI

Query:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVA-PTLPKTSE---KTPTNSPAKKFDPVIVIVAVAIV
         ++IK S+TRKK+ESTQSN T E+LPPAK+T          S  L+ +  LKK++SHLP A A A PT    S    K PTNSP  KFD V VIVAVAIV
Subjt:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVA-PTLPKTSE---KTPTNSPAKKFDPVIVIVAVAIV

Query:  VLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS
        VLWGRLCA LCTAALFYL R L S+ E D      V+   G  FGK+S
Subjt:  VLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ2 Uncharacterized protein2.4e-5154.15Show/hide
Query:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI
        MA+SS+ I PSK PL+F   CF SS +  T+K  +   R RR  S  FRFKKSSATVPVD     +  P  D+ SF P FKK PP   I  +A  V GEI
Subjt:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI

Query:  V--ESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP------KTSEKTPTNSPAKKFDPVIVIV
        V   S+KPSQTRKK  STQSN T ++L P ++TAAL H+VSLPS++L RQ   KK VS HLP  AAVA T P      K + K PT  P K FD VI++V
Subjt:  V--ESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP------KTSEKTPTNSPAKKFDPVIVIV

Query:  AVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS
         VAIV+LWGRLCA LCT ALFYL RR+ SE+EPDGG         G+G G++S
Subjt:  AVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS

A0A5A7UA28 60S ribosomal protein L446.5e-4954.55Show/hide
Query:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI
        MA+SS K  PSK P  F   CF SS +   +K  +   R RR  SL FRFKKSSATVPVD     +  P  D+ SFSP FKKPPP   IT +A  V GEI
Subjt:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI

Query:  V-----ESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP------KTSEKTPTNSPAKKFDPVI
        V     ES+KPSQTRKK ESTQSN T ++L P ++ AA  H+VS PS+ L RQ D K++VS HLP  AAVA T P      K + K  TN P K  D VI
Subjt:  V-----ESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP------KTSEKTPTNSPAKKFDPVI

Query:  VIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRER
        ++V VAI+VLWGRLCA LCT ALFYL RR+ SE+E  GG  R
Subjt:  VIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRER

A0A6J1F3C2 uncharacterized protein LOC1114417601.9e-4552.85Show/hide
Query:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI
        MAESSD     K  L+F  RCF SSP  + QK        RR PSLRFRFKKSSATVP+D+A     VPC D+ S SP F  PPPPP I    +   G  
Subjt:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI

Query:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPT-LPKTSE-KTPTNSPAKKFDPVIVIVAVAIVVL
         ++IKPS+TRKK+ESTQSN      P ++ T + S      S  L+ +  LKK++SHLP+AAA   T LP +   K PTNSP KKFD VIVIVAVAIVVL
Subjt:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPT-LPKTSE-KTPTNSPAKKFDPVIVIVAVAIVVL

Query:  WGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS
        WGRLCA LCTAALFYL R L S+ E D      V+   G  FG++S
Subjt:  WGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS

A0A6J1GBH7 uncharacterized protein LOC1114526509.3e-8069.23Show/hide
Query:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI
        MAE+S+K+SPSKRPL+F LRCFGSSP+ +T+KNP TGRR  RIPS RFRFKKSSATVP+D AVPEITVPCDDKASFSP FKKPPP P I SRA  V  +I
Subjt:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI

Query:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPTLP---KTSEKTPTNSPAKKFDPVIVIVAVAIVV
        VE IKPSQ  KKTEST+S    + L PAKRTAAL H++SLPSRRLNRQ D KKTVSHL +     PT     K ++K P NSPAK  D +IVIVAVAIVV
Subjt:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPTLP---KTSEKTPTNSPAKKFDPVIVIVAVAIVV

Query:  LWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS
        LWG+LCA LCT ALFY  RRL SE E +GG E RVLNR+G+GF K+S
Subjt:  LWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS

A0A6J1IZW6 uncharacterized protein LOC1114814551.5e-4553.23Show/hide
Query:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI
        MAESSD     K  L+F  RCF SSP  + QK        RR PSLRFRFKK SATVP+D+A     VPC D+ SFSP F  PPPP  I    +   G  
Subjt:  MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEI

Query:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVA-PTLPKTSE---KTPTNSPAKKFDPVIVIVAVAIV
         ++IK S+TRKK+ESTQSN T E+LPPAK+T          S  L+ +  LKK++SHLP A A A PT    S    K PTNSP  KFD V VIVAVAIV
Subjt:  VESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVA-PTLPKTSE---KTPTNSPAKKFDPVIVIVAVAIV

Query:  VLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS
        VLWGRLCA LCTAALFYL R L S+ E D      V+   G  FGK+S
Subjt:  VLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCTTCTGACAAAATCTCTCCGTCCAAACGCCCACTCAATTTTTTCCTCCGTTGCTTCGGATCTTCCCCCGAATTTGAAACCCAAAAGAATCCGGCGACCGG
CCGACGGGGGCGCCGGATTCCGTCGCTTAGGTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTTGACTCCGCCGTGCCGGAGATCACCGTGCCATGTGACGATAAAG
CCTCTTTTTCGCCGGTGTTCAAGAAACCCCCTCCCCCGCCGTCGATTACGTCCAGAGCTCTGGCAGTCCCAGGAGAGATCGTCGAGTCGATAAAGCCAAGTCAAACTCGG
AAGAAAACTGAGTCAACTCAGTCTAATTCCACGGCGGAGAGATTACCGCCGGCGAAAAGAACCGCCGCGTTGTCGCACACTGTCTCGCTTCCCTCCCGGCGATTAAACCG
CCAAACAGACTTGAAAAAAACAGTCTCTCATCTCCCCTCCGCCGCCGCCGTCGCACCCACCTTGCCAAAGACCTCCGAGAAGACGCCGACGAATTCTCCGGCGAAGAAAT
TCGATCCGGTGATTGTGATTGTTGCGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCACACTCTGCACGGCGGCGCTGTTCTACCTCAGCCGGCGGTTGGGATCG
GAAGTCGAACCAGACGGCGGCCGCGAGAGGCGAGTTTTGAATCGAGAAGGAACTGGTTTTGGGAAGATTTCTTGA
mRNA sequenceShow/hide mRNA sequence
CACTACACGACTTCTTCCAAATGCCGATTTCCATTTCCTCTGCTCCATTTTTGCTCTCCCATGGCGGAATCTTCTGACAAAATCTCTCCGTCCAAACGCCCACTCAATTT
TTTCCTCCGTTGCTTCGGATCTTCCCCCGAATTTGAAACCCAAAAGAATCCGGCGACCGGCCGACGGGGGCGCCGGATTCCGTCGCTTAGGTTCCGATTCAAGAAGTCCT
CTGCAACTGTGCCGGTTGACTCCGCCGTGCCGGAGATCACCGTGCCATGTGACGATAAAGCCTCTTTTTCGCCGGTGTTCAAGAAACCCCCTCCCCCGCCGTCGATTACG
TCCAGAGCTCTGGCAGTCCCAGGAGAGATCGTCGAGTCGATAAAGCCAAGTCAAACTCGGAAGAAAACTGAGTCAACTCAGTCTAATTCCACGGCGGAGAGATTACCGCC
GGCGAAAAGAACCGCCGCGTTGTCGCACACTGTCTCGCTTCCCTCCCGGCGATTAAACCGCCAAACAGACTTGAAAAAAACAGTCTCTCATCTCCCCTCCGCCGCCGCCG
TCGCACCCACCTTGCCAAAGACCTCCGAGAAGACGCCGACGAATTCTCCGGCGAAGAAATTCGATCCGGTGATTGTGATTGTTGCGGTGGCGATTGTGGTGCTGTGGGGG
CGACTCTGCGCCACACTCTGCACGGCGGCGCTGTTCTACCTCAGCCGGCGGTTGGGATCGGAAGTCGAACCAGACGGCGGCCGCGAGAGGCGAGTTTTGAATCGAGAAGG
AACTGGTTTTGGGAAGATTTCTTGAGAGGTGTAGGCGAAGTATGTTCGTGAAAACGGTTACGGGAAATGGAAACCGCCAGTGAAGGGAGCTTGAAGAATATTTTAATGGC
GGAAAAGTGACAGGTTGTTAATGCTAATTTTTGTAAATTAATGGCTAGTGGTAAGAGTTCAAACATTATTGTAACACTAATAATTTGACTAATATCTAATAACGAATAAG
GGTCTGAAGACAATTATCTATTTTTCACGATTTATGTGTGTATATATATTTATTTAAATATCGAAAAATATATATTGCTGACATGACCAAAGCAAACTAGTGAATGG
Protein sequenceShow/hide protein sequence
MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIVESIKPSQTR
KKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPTLPKTSEKTPTNSPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGS
EVEPDGGRERRVLNREGTGFGKIS