; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013983 (gene) of Snake gourd v1 genome

Gene IDTan0013983
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG02:95846262..95849924
RNA-Seq ExpressionTan0013983
SyntenyTan0013983
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585497.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. sororia]1.9e-14192.11Show/hide
Query:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
        + KGDSIQIREVW+ANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLG+FKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
Subjt:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF

Query:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL
        REFN +NDIFASDSIELLRQCGIDFQKNN+EGIDVNRFGELLMSSGVVLN+DV WVTFHSGYDFGYLLKLLTCR LPETQAGFF+LI IYFPVLYDIKHL
Subjt:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL

Query:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGNICRLCPYV
        MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR TFFNGSTQKYA ++  + P V
Subjt:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGNICRLCPYV

KAG7020412.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-14294.94Show/hide
Query:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
        + KGDSIQIREVW+ANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLG+FKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
Subjt:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF

Query:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL
        REFN +NDIFASDSIELLRQCGIDFQKNN+EGIDVNRFGELLMSSGVVLN+DV WVTFHSGYDFGYLLKLLTCR LPETQAGFF+LI IYFPVLYDIKHL
Subjt:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL

Query:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR TFFNGSTQKYAG
Subjt:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

XP_022132308.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]3.5e-14093Show/hide
Query:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
        + KGDSIQIREVWN NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+G+FKNINDYNYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
Subjt:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF

Query:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL
        REFN+  DIFASDSIELLRQCGIDF+KNN+EGIDVNRFGELLMSSGVVLND V+WVTFHSGYDFGYLLKLLTCRTLP+TQAGFFDLINIYFP++YDIKHL
Subjt:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL

Query:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYAG
Subjt:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

XP_022951691.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]6.4e-14294.94Show/hide
Query:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
        + KGDSIQIREVW+ANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLG+FKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
Subjt:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF

Query:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL
        REFN +NDIFASDSIELLRQCGIDFQKNN+EGIDVNRFGELLMSSGVVLN+DV WVTFHSGYDFGYLLKLLTCR LPETQAGFF+LI IYFPVLYDIKHL
Subjt:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL

Query:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR TFFNGSTQKYAG
Subjt:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

XP_038885551.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]1.8e-13993Show/hide
Query:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
        + KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLG+FKNIND+NY+TLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
Subjt:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF

Query:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL
        REFNI NDIFASDSIELLRQCGIDFQKNN+EGIDVNRFGELLMSSGVVLN+DV+WVTFHSGYDFGYLLKLLTCR LP  QAGFF+LIN+YFPV+YDIKHL
Subjt:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL

Query:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAG
Subjt:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

TrEMBL top hitse value%identityAlignment
A0A0A0LMH2 Poly(A)-specific ribonuclease6.1e-13891.83Show/hide
Query:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
        + KGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG+FKNIND+NY+TLK NV+ LKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNF
Subjt:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF

Query:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL
        REFNI +DIFASDSIELLRQCGIDFQKNN+EGIDVNRFGELLMSSGVVLNDDV+WVTFHSGYDFGYLLKLLTCR LP  QAGFF+LIN+YFPVLYDIKHL
Subjt:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL

Query:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAG
Subjt:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

A0A5A7V9Q6 Poly(A)-specific ribonuclease1.4e-13791.44Show/hide
Query:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
        + KGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG+FKNIND+NY+TLK NV+ LKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNF
Subjt:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF

Query:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL
        REFNI +DIFASDSIELLRQCGIDFQKNN+EGIDVNRFGELLMSSGVVLNDDV+WVTFHSGYDFGYLLKLLTCR LP  QAGFF+LIN+YFPV+YDIKHL
Subjt:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL

Query:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAG
Subjt:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

A0A6J1BVW9 Poly(A)-specific ribonuclease1.7e-14093Show/hide
Query:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
        + KGDSIQIREVWN NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+G+FKNINDYNYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
Subjt:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF

Query:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL
        REFN+  DIFASDSIELLRQCGIDF+KNN+EGIDVNRFGELLMSSGVVLND V+WVTFHSGYDFGYLLKLLTCRTLP+TQAGFFDLINIYFP++YDIKHL
Subjt:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL

Query:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYAG
Subjt:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

A0A6J1GI81 Poly(A)-specific ribonuclease3.1e-14294.94Show/hide
Query:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
        + KGDSIQIREVW+ANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLG+FKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
Subjt:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF

Query:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL
        REFN +NDIFASDSIELLRQCGIDFQKNN+EGIDVNRFGELLMSSGVVLN+DV WVTFHSGYDFGYLLKLLTCR LPETQAGFF+LI IYFPVLYDIKHL
Subjt:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL

Query:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR TFFNGSTQKYAG
Subjt:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

A0A6J1KTM7 Poly(A)-specific ribonuclease3.1e-14294.94Show/hide
Query:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
        + KGDSIQIREVW+ANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLG+FKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF
Subjt:  MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNF

Query:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL
        REFN +NDIFASDSIELLRQCGIDFQKNN+EGIDVNRFGELLMSSGVVLN+DV WVTFHSGYDFGYLLKLLTCR LPETQAGFF+LI IYFPVLYDIKHL
Subjt:  REFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHL

Query:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR TFFNGSTQKYAG
Subjt:  MKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

SwissProt top hitse value%identityAlignment
Q3ZC01 CCR4-NOT transcription complex subunit 75.2e-7855.08Show/hide
Query:  SIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI
        S +I EVW  NL+EE   IR+++ ++NY+AMDTEFPGVV RP+G F++  DY YQ L+ NVD LK+IQLGLTF +E G  P  GT     WQFNF+ FN+
Subjt:  SIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI

Query:  VNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMKFCN
          D++A DSIELL   GI F+K+ +EGI+   F ELLM+SGVVL + V W++FHSGYDFGYL+K+LT   LPE +  FF+++ ++FPV+YD+K+LMK C 
Subjt:  VNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMKFCN

Query:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGNI
        +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+ FF       KY G++
Subjt:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGNI

Q9LEU4 Probable CCR4-associated factor 1 homolog 102.4e-11575.69Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K DSI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+ +FK  ND NY+TLK NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK
        FNI  DI+AS+SIELLRQCGIDF+KN ++GIDV RFGEL+MSSG+VLND +SWVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP +YDIKHLM 
Subjt:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY G
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

Q9S9P2 Probable CCR4-associated factor 1 homolog 22.1e-9563.32Show/hide
Query:  DSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNIN------DYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF
        D+I+IREVWN NLE+E ALI + +D+F Y+AMDTEFPG+V + + +  N N      +YNY TLK+NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQF
Subjt:  DSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNIN------DYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF

Query:  NFREFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIK
        NFREFN+++D+FA DSIELLR+  ID +KNN+ G+D  RF ELLM SGVVLND + WVTFH GYDFGYLLKLL+ + LPE  + FFD +  +FPV+YDIK
Subjt:  NFREFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIK

Query:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        +LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  TF K+++ FF GS  KY+G
Subjt:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

Q9SAI2 Probable CCR4-associated factor 1 homolog 66.3e-11674.12Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G+FK+  DY+Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK
        F++ +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V WVTFHSGYDFGYLLKLLTC+ LP++Q  FF LIN+YFP +YDIKHLMK
Subjt:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        FCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+G
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.2e-11775.39Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFR
        K DSIQIREVWN NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G+FK   +Y+Y+TLK+NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFR
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFR

Query:  EFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLM
        EF++ +DI+A+DSIELLRQ GIDF KNN+ GID  RF ELLMSSG+VLN++V WVTFHSGYDFGYLLKLLTC+ LPETQ GFF++I++YFP +YDIKHLM
Subjt:  EFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLM

Query:  KFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        KFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+G
Subjt:  KFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.5e-11774.12Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G+FK+  DY+Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK
        F++ +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V WVTFHSGYDFGYLLKLLTC+ LP++Q  FF LIN+YFP +YDIKHLMK
Subjt:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        FCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+G
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.5e-11774.12Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G+FK+  DY+Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK
        F++ +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V WVTFHSGYDFGYLLKLLTC+ LP++Q  FF LIN+YFP +YDIKHLMK
Subjt:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        FCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+G
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.5e-11774.12Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G+FK+  DY+Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK
        F++ +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN++V WVTFHSGYDFGYLLKLLTC+ LP++Q  FF LIN+YFP +YDIKHLMK
Subjt:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        FCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+G
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.2e-11975.39Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFR
        K DSIQIREVWN NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G+FK   +Y+Y+TLK+NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFR
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFR

Query:  EFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLM
        EF++ +DI+A+DSIELLRQ GIDF KNN+ GID  RF ELLMSSG+VLN++V WVTFHSGYDFGYLLKLLTC+ LPETQ GFF++I++YFP +YDIKHLM
Subjt:  EFNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLM

Query:  KFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        KFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+G
Subjt:  KFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-11675.69Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K DSI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+ +FK  ND NY+TLK NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK
        FNI  DI+AS+SIELLRQCGIDF+KN ++GIDV RFGEL+MSSG+VLND +SWVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP +YDIKHLM 
Subjt:  FNIVNDIFASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY G
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAAGGTGATTCGATTCAAATCCGTGAGGTCTGGAACGCCAATTTGGAGGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACATAGCCATGGA
TACTGAGTTCCCCGGCGTGGTCCTTCGACCGCTTGGTTCTTTCAAGAATATCAACGATTACAACTACCAGACTCTCAAGAGTAATGTTGACACCTTGAAGTTGATTCAAT
TGGGTCTTACGTTCTCTGATGAGAATGGAAATCTTCCCACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGCGAGTTCAACATTGTTAATGATATTTTT
GCCAGTGATTCCATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACCAAGAGGGTATCGATGTCAATCGCTTTGGTGAGCTTCTAATGTCTTCTGGGGT
TGTGTTGAACGATGATGTTAGTTGGGTGACCTTCCACAGTGGGTATGATTTTGGTTACTTGCTCAAATTGCTGACTTGCCGAACCTTACCGGAAACGCAGGCCGGGTTTT
TTGATTTGATCAATATCTATTTTCCGGTGCTTTATGACATCAAGCATTTGATGAAGTTTTGCAATAGTCTCCATGGTGGGCTGAACAAACTTGCCGAGTTATTAGAAGTG
GAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTGAGGGATACCTTTTTCAATGGATCTACCCAGAAATACGCAGG
TAACATTTGCAGACTCTGTCCATACGTGTGTTTTGAGGTATCCCTGCTTCTAATGTTTCTGACTGCTGACATGGTTGTAGAGTTTAGAGGCGTATCTCTGGCTCGGAAAA
TCAGAGTGGAATGTAAGAGCCTTGGAGATTTTACACCCCTGTTAATTTTTCTTCAGATCAAATATCACAAAATAAAGTGGATAAAAAAATCAATTTCAAATCTAGTAAAA
AGTATAACACATGTCAATAAGTGGTTACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAAGGTGATTCGATTCAAATCCGTGAGGTCTGGAACGCCAATTTGGAGGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACATAGCCATGGA
TACTGAGTTCCCCGGCGTGGTCCTTCGACCGCTTGGTTCTTTCAAGAATATCAACGATTACAACTACCAGACTCTCAAGAGTAATGTTGACACCTTGAAGTTGATTCAAT
TGGGTCTTACGTTCTCTGATGAGAATGGAAATCTTCCCACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGCGAGTTCAACATTGTTAATGATATTTTT
GCCAGTGATTCCATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACCAAGAGGGTATCGATGTCAATCGCTTTGGTGAGCTTCTAATGTCTTCTGGGGT
TGTGTTGAACGATGATGTTAGTTGGGTGACCTTCCACAGTGGGTATGATTTTGGTTACTTGCTCAAATTGCTGACTTGCCGAACCTTACCGGAAACGCAGGCCGGGTTTT
TTGATTTGATCAATATCTATTTTCCGGTGCTTTATGACATCAAGCATTTGATGAAGTTTTGCAATAGTCTCCATGGTGGGCTGAACAAACTTGCCGAGTTATTAGAAGTG
GAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTGAGGGATACCTTTTTCAATGGATCTACCCAGAAATACGCAGG
TAACATTTGCAGACTCTGTCCATACGTGTGTTTTGAGGTATCCCTGCTTCTAATGTTTCTGACTGCTGACATGGTTGTAGAGTTTAGAGGCGTATCTCTGGCTCGGAAAA
TCAGAGTGGAATGTAAGAGCCTTGGAGATTTTACACCCCTGTTAATTTTTCTTCAGATCAAATATCACAAAATAAAGTGGATAAAAAAATCAATTTCAAATCTAGTAAAA
AGTATAACACATGTCAATAAGTGGTTACTATGA
Protein sequenceShow/hide protein sequence
MSKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGSFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIVNDIF
ASDSIELLRQCGIDFQKNNQEGIDVNRFGELLMSSGVVLNDDVSWVTFHSGYDFGYLLKLLTCRTLPETQAGFFDLINIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEV
ERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGNICRLCPYVCFEVSLLLMFLTADMVVEFRGVSLARKIRVECKSLGDFTPLLIFLQIKYHKIKWIKKSISNLVK
SITHVNKWLL