CuGenDBv2

Gene ID	Tan0013989
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Calcium load-activated calcium channel
Genome location	LG08:63541341..63542655
RNA-Seq Expression	Tan0013989
Synteny	Tan0013989
Gene Ontology terms	GO:0032469 - endoplasmic reticulum calcium ion homeostasis (biological process) GO:0070588 - calcium ion transmembrane transport (biological process) GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component) GO:0005262 - calcium channel activity (molecular function)
InterPro domains	IPR002809 - Integral membrane protein EMC3/TMCO1-like IPR008559 - Calcium load-activated calcium channel

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6596248.1 Calcium load-activated calcium channel, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-97

98.95

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Query:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
        MATIPLFSSFRYSD LTVVGISVCTA+VCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
Subjt:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA

Query:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
        VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
Subjt:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN

XP_004136557.1 calcium load-activated calcium channel [Cucumis sativus]

2.3e-96

97.38

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Query:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
        MATIPLFSSFRYSD L+VVGISVCTAV+CEAISW+LIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDR+ETSLKESSRDLSLFKFKSGA
Subjt:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA

Query:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
        VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
Subjt:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN

XP_008443026.1 PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Cucumis melo]

5.1e-96

96.86

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Query:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
        MATIPLFSSFRYSD LTV+GISVCTAV+CEAISW+LIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDR+ETSLKESSRDLSLFKFKSGA
Subjt:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA

Query:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
        VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQG+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
Subjt:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN

XP_022151350.1 calcium load-activated calcium channel-like [Momordica charantia]

1.3e-96

98.43

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Query:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
        MATIPLFSSFRYSD LTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKI+VKKSKTKKIDRVETSLKES+RDLSLFKFKSGA
Subjt:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA

Query:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
        VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
Subjt:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN

XP_038903426.1 calcium load-activated calcium channel-like [Benincasa hispida]

1.3e-96

98.43

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Query:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
        MATIP FSSFRYSD LTVVGISVCTAVVCEAISW+LIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
Subjt:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA

Query:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
        VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
Subjt:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGX0 Calcium load-activated calcium channel

1.1e-96

97.38

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Query:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
        MATIPLFSSFRYSD L+VVGISVCTAV+CEAISW+LIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDR+ETSLKESSRDLSLFKFKSGA
Subjt:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA

Query:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
        VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
Subjt:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN

A0A1S3B750 Calcium load-activated calcium channel

2.5e-96

96.86

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Query:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
        MATIPLFSSFRYSD LTV+GISVCTAV+CEAISW+LIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDR+ETSLKESSRDLSLFKFKSGA
Subjt:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA

Query:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
        VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQG+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
Subjt:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN

A0A5A7TQC2 Calcium load-activated calcium channel

2.5e-96

96.86

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Query:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
        MATIPLFSSFRYSD LTV+GISVCTAV+CEAISW+LIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDR+ETSLKESSRDLSLFKFKSGA
Subjt:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA

Query:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
        VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQG+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
Subjt:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN

A0A6J1DAX6 Calcium load-activated calcium channel

6.5e-97

98.43

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Query:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
        MATIPLFSSFRYSD LTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKI+VKKSKTKKIDRVETSLKES+RDLSLFKFKSGA
Subjt:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA

Query:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
        VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
Subjt:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN

A0A6J1J172 Calcium load-activated calcium channel

4.0e-94

95.85

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Query:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
        MATIPLFSSFRYSD LTVVGISVCTAV+CEAISW+LIYRTNSYKTLRSSIDKAAKKLETMKTD+SKI VKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
Subjt:  MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA

Query:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG--AGLFPMPDPKTN
        VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGL GDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG  AGLFPMPDPKTN
Subjt:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAG--AGLFPMPDPKTN

SwissProt top hits

e value

%identity

Alignment

C5HGF3 Calcium load-activated calcium channel

1.1e-37

46.15

Show/hide

Query:  SFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFV
        S  ++D L +V ISVCTA++ E I+W+L+YRT+ YK L++ ++K +KKLE  K   ++   ++ K KKI+R E  LK ++RDLS+ + KS   +      
Subjt:  SFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFV

Query:  VFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDP
        + G+ NS+F+G+VVAKLPF P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P P
Subjt:  VFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDP

Q3T0N3 Calcium load-activated calcium channel

1.1e-37

46.15

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Query:  SFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFV
        S  ++D L +V ISVCTA++ E I+W+L+YRT+ YK L++ ++K +KKLE  K   ++   ++ K KKI+R E  LK ++RDLS+ + KS   +      
Subjt:  SFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFV

Query:  VFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDP
        + G+ NS+F+G+VVAKLPF P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P P
Subjt:  VFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDP

Q5R9B0 Calcium load-activated calcium channel

1.1e-37

46.15

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Query:  SFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFV
        S  ++D L +V ISVCTA++ E I+W+L+YRT+ YK L++ ++K +KKLE  K   ++   ++ K KKI+R E  LK ++RDLS+ + KS   +      
Subjt:  SFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFV

Query:  VFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDP
        + G+ NS+F+G+VVAKLPF P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P P
Subjt:  VFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDP

Q921L3 Calcium load-activated calcium channel

1.1e-37

46.15

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Query:  SFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFV
        S  ++D L +V ISVCTA++ E I+W+L+YRT+ YK L++ ++K +KKLE  K   ++   ++ K KKI+R E  LK ++RDLS+ + KS   +      
Subjt:  SFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFV

Query:  VFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDP
        + G+ NS+F+G+VVAKLPF P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P P
Subjt:  VFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDP

Q9UM00 Calcium load-activated calcium channel

1.1e-37

46.15

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Query:  SFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFV
        S  ++D L +V ISVCTA++ E I+W+L+YRT+ YK L++ ++K +KKLE  K   ++   ++ K KKI+R E  LK ++RDLS+ + KS   +      
Subjt:  SFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFV

Query:  VFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDP
        + G+ NS+F+G+VVAKLPF P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P P
Subjt:  VFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDP

Arabidopsis top hits

e value

%identity

Alignment

AT3G12030.1 Protein of unknown function DUF106, transmembrane

1.9e-85

84.46

Show/hide

Query:  TIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTD--SSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA
        TIPLF+SF+Y+D LTVVGIS CTA+VCEAISW+LIYRT+SYK+L+ SIDKA KKLETMKT+  SSK+++KKSKTKKIDRVETSLKESSRDLSLFKFKSGA
Subjt:  TIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTD--SSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGA

Query:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDPKTN
        VVALVLFVVFGLLNSLFEGKVVAKLPF P  +V KMSHRGL+GDDPTDC+MAFLY LCSISIRTNLQKFLGFSPPRGA    GLFPMPDPKTN
Subjt:  VVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDPKTN

AT5G06660.1 Protein of unknown function DUF106, transmembrane

9.7e-85

84.69

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Query:  MAT-IPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTD--SSKITVKKSKTKKIDRVETSLKESSRDLSLFKFK
        MAT IPLF+SF+Y+D LTVVGIS CTA+VCEAISW+LIYRT+SYK+L+SSIDKA+KKLETMKTD  SSK+T KKSKTKKIDRVE+SLKESSRDLSLFKFK
Subjt:  MAT-IPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTD--SSKITVKKSKTKKIDRVETSLKESSRDLSLFKFK

Query:  SGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDPKTN
        SGAVVALVLFVVFGLLNSLFEGKVVAKLPF P  +V KMSHRGL+GDD TDC+MAFLY LCSISIRTNLQKFLGFSPPRGA    GLFPMPDPKTN
Subjt:  SGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMPDPKTN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCACAATCCCTCTCTTCTCCTCCTTCCGATATTCCGACGGCCTCACTGTGGTCGGAATCTCCGTCTGCACCGCCGTCGTCTGCGAGGCCATTTCATGGCTTCTCAT
CTACCGCACCAACTCCTACAAAACCCTCCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGACAGCTCCAAAATCACCGTCAAGAAGTCCAAAA
CCAAGAAGATCGATCGCGTCGAGACCAGTCTCAAGGAATCCAGCCGCGACCTCTCGCTCTTCAAGTTCAAATCCGGCGCCGTCGTTGCCCTCGTTCTGTTCGTCGTCTTT
GGTTTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGAGTCACCGAGGGTTACAAGGCGACGATCCTAC
TGATTGTGCTATGGCGTTTCTATACTTCCTCTGTTCGATTAGCATCAGAACCAATCTGCAGAAGTTCTTGGGATTCTCGCCGCCGAGGGGCGCCGGCGCCGGTTTGTTCC
CGATGCCAGATCCTAAGACGAATTGA

mRNA sequence

Show/hide mRNA sequence

AAAATTCATCCCAGTCTACAGTCTCCAATCTGTGTATAGTCTTTTTTTTTTTTCCCCGAATTGGGACTGACATCTGCCATTGTCAACAGAGAAGAACCAATTTGATAATA
ACTGATCAAATTTGATATTTTTATTTGAAAGCGCCTCGTTCAGATTCAGCCCAATTTCCCCTTTAGATCCAAATCCAACTCTCCACAAAATTTTCTCGCACTTACCCACA
GATTCCCCCATTTTCTCTTCCAACTCCGGTGATGGCCACAATCCCTCTCTTCTCCTCCTTCCGATATTCCGACGGCCTCACTGTGGTCGGAATCTCCGTCTGCACCGCCG
TCGTCTGCGAGGCCATTTCATGGCTTCTCATCTACCGCACCAACTCCTACAAAACCCTCCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGAC
AGCTCCAAAATCACCGTCAAGAAGTCCAAAACCAAGAAGATCGATCGCGTCGAGACCAGTCTCAAGGAATCCAGCCGCGACCTCTCGCTCTTCAAGTTCAAATCCGGCGC
CGTCGTTGCCCTCGTTCTGTTCGTCGTCTTTGGTTTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGA
GTCACCGAGGGTTACAAGGCGACGATCCTACTGATTGTGCTATGGCGTTTCTATACTTCCTCTGTTCGATTAGCATCAGAACCAATCTGCAGAAGTTCTTGGGATTCTCG
CCGCCGAGGGGCGCCGGCGCCGGTTTGTTCCCGATGCCAGATCCTAAGACGAATTGATTTAGGTTAGGCTTGGATCAAATTTATGCTCCTCTTTGATTATGAATTTTTCC
TACTGGTAAAAACTTGATTTGGGCTGATTAGGCTTACTTTTATTAGGGTTCTATATGTTAATTTTCTAGTGAGTTCATCGGACTTAGTATAGCTATGGTTTGTGAGAATT
TGAGGGGGTGATTCTGGTTCTAATCTCCACTTGCATTCTTGATTAGATTTGGAAATAATACCATCTTTTTTGGATCAATATAACCTCTTGATCTTTGAAAACTTTGATTA
CATTCAATGATTCTATTGCCTTGTTGTATGATTGTGAGATTGATCTGTGAGTTCTGCTGGCTGTTGATCAAATAAATCTTGACCTAAGCTACCTTTTTCTCCAATTCTAC
CTTTCATTGCTTTATTGATATGTTATGGTGATTACTTTTCTGTTTGAGATTCATAGCATACCCAACATTATGCCATTCCATGAACTTAAGTTTTCTTAATTTAGC

Protein sequence

Show/hide protein sequence

MATIPLFSSFRYSDGLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVF
GLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN

Tan0013989 (gene) of Snake gourd v1 genome