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Tan0013993 (gene) of Snake gourd v1 genome

Gene IDTan0013993
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGibberellin regulated protein
Genome locationContig00035_ERROPOS14500000+:215038..215449
RNA-Seq ExpressionTan0013993
SyntenyTan0013993
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026958.1 Snakin-1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-4188.3Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LV+VSL+LSSFLLQHA ADSS TY PS CDSKCG RCLNAGVKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_008440339.1 PREDICTED: peamaclein-like [Cucumis melo]4.0e-4188.3Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS SV LV++S ILSSF LQ+ TADSSTTY PS CDSKCGVRCLNAGVKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_023003134.1 peamaclein-like [Cucurbita maxima]5.2e-4188.3Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LV+VSLILSSFLL HA ADSS TYVPS CDSKCG RCLNAGVKDRC+KYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_031742788.1 peamaclein-like isoform X2 [Cucumis sativus]3.6e-4290.43Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS SV LV++SLILSSF LQ+ATADSSTTY PS CDSKCGVRCLNAGVKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_038880848.1 peamaclein-like [Benincasa hispida]3.0e-4190.43Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS SV LV++SLILSSFLLQ+A ADSSTTY PS CDSKCGVRCLNAGVKDRCLKYCGICCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TrEMBL top hitse value%identityAlignment
A0A0A0KLG3 Uncharacterized protein7.3e-4188.42Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSD-CDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS SV LV++SLILSSF LQ+ATADSSTTY P   CDSKCGVRCLNAGVKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSD-CDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A1S3B1M5 peamaclein-like1.9e-4188.3Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS SV LV++S ILSSF LQ+ TADSSTTY PS CDSKCGVRCLNAGVKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A2P5FSJ8 Gibberellin regulated protein2.0e-3071.28Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   + L++VSL  SS LLQ   AD +    PS CDSKC +RC NAGVKDRCLKYCGICCQQC CVPSGTYGNKSECPCYRDKL+SKG  KCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1HEX9 peamaclein-like4.3e-4187.23Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LV+VSL+LSSFLLQHA ADS  TY PS CDSKCG RCLNAGVKDRCLKYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1KSF0 peamaclein-like2.5e-4188.3Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LV+VSLILSSFLL HA ADSS TYVPS CDSKCG RCLNAGVKDRC+KYCG+CCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

SwissProt top hitse value%identityAlignment
O80641 Gibberellin-regulated protein 81.1e-2255.32Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   V   ++SL+L+S     ++ADSS       C  KC VRC  AG  + CLKYC ICCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

O82328 Gibberellin-regulated protein 75.6e-2255.45Show/hide
Query:  LVVVSLILSSFLLQHAT---ADSSTTYVPSD-----------CDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKC
        LV+ SL+L S  L  AT   A  S    P+            C  KC  RC  AG+KDRCLKYCGICC+ C+CVPSGTYGNK EC CYRDKL+SKG  KC
Subjt:  LVVVSLILSSFLLQHAT---ADSSTTYVPSD-----------CDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKC

Query:  P
        P
Subjt:  P

P86888 Peamaclein2.7e-2477.05Show/hide
Query:  SDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        S CDSKCGVRC  AG ++RCLKYCGICC++C CVPSGTYGNK ECPCYRD  NSKG  KCP
Subjt:  SDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q8LFM2 Gibberellin-regulated protein 101.2e-2458.95Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  +V ++++SL+++S L   +TADS      S C  KC VRC  AG +DRCLKYC ICC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q948Z4 Snakin-18.9e-2862.77Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   + L++V+L+++  L+Q   A SS       CDSKC +RC  AG+ DRCLKYCGICC++CKCVPSGTYGNK ECPCYRDK NSKGKSKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein8.3e-2154.44Show/hide
Query:  VNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAG-VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        V   ++SL+L+S     ++ADSS       C  KC VRC  A    + CL+ C ICCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  VNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAG-VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT1G10588.2 Gibberellin-regulated family protein1.1e-2054.44Show/hide
Query:  VNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAG-VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        V   ++SL+L+S     ++ADSS       C  KC VRC  A    + CL+ C ICCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  VNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAG-VKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G14900.1 Gibberellin-regulated family protein4.0e-2355.45Show/hide
Query:  LVVVSLILSSFLLQHAT---ADSSTTYVPSD-----------CDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKC
        LV+ SL+L S  L  AT   A  S    P+            C  KC  RC  AG+KDRCLKYCGICC+ C+CVPSGTYGNK EC CYRDKL+SKG  KC
Subjt:  LVVVSLILSSFLLQHAT---ADSSTTYVPSD-----------CDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKC

Query:  P
        P
Subjt:  P

AT2G39540.1 Gibberellin-regulated family protein8.0e-2455.32Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   V   ++SL+L+S     ++ADSS       C  KC VRC  AG  + CLKYC ICCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT5G59845.1 Gibberellin-regulated family protein8.5e-2658.95Show/hide
Query:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  +V ++++SL+++S L   +TADS      S C  KC VRC  AG +DRCLKYC ICC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTACTTCTGTCAATTTGGTGGTTGTTTCATTGATTCTGAGCTCCTTCCTCCTCCAACATGCCACAGCTGATTCTTCTACAACCTATGTACCAAGTGACTGTGA
TTCAAAATGTGGGGTAAGATGTTTGAATGCAGGGGTGAAGGACAGGTGCCTTAAGTATTGTGGAATCTGCTGCCAACAATGCAAATGTGTGCCCTCTGGAACCTATGGAA
ACAAGTCAGAATGCCCTTGCTACAGGGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTACTTCTGTCAATTTGGTGGTTGTTTCATTGATTCTGAGCTCCTTCCTCCTCCAACATGCCACAGCTGATTCTTCTACAACCTATGTACCAAGTGACTGTGA
TTCAAAATGTGGGGTAAGATGTTTGAATGCAGGGGTGAAGGACAGGTGCCTTAAGTATTGTGGAATCTGCTGCCAACAATGCAAATGTGTGCCCTCTGGAACCTATGGAA
ACAAGTCAGAATGCCCTTGCTACAGGGACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA
Protein sequenceShow/hide protein sequence
MKSTSVNLVVVSLILSSFLLQHATADSSTTYVPSDCDSKCGVRCLNAGVKDRCLKYCGICCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP