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Tan0013996 (gene) of Snake gourd v1 genome

Gene IDTan0013996
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG09:70241436..70242189
RNA-Seq ExpressionTan0013996
SyntenyTan0013996
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR034577 - Protein NIM1-INTERACTING 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058070.1 hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa]8.8e-2866.15Show/hide
Query:  MGKEKRKGMPADNGGGICEKKTKKDE-TAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEEKE-ETAVPSAEVVK
        MGKEKRK    ++   I EKKT+ D+ TA+ A EEPTDEEVEEFY+ILRRMKQ AEYFGV++GM+TK+L AVVAAAAN +E+++EEK   TA P+     
Subjt:  MGKEKRKGMPADNGGGICEKKTKKDE-TAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEEKE-ETAVPSAEVVK

Query:  RRGKG-KEVVEENGLR-LDLNIAVAVESDG
        +RGK  KEVVEENGLR LDLNIAVAV+SDG
Subjt:  RRGKG-KEVVEENGLR-LDLNIAVAVESDG
KAE8652459.1 hypothetical protein Csa_013196 [Cucumis sativus]1.3e-3166.67Show/hide
Query:  MGKEKRKGMPADNGGGICEKKTKKDETAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEEKEE-----TAVPSAE
        MGKEKRK    +N   I EKKTK D+T   A EEPTDEEVEEFY+ILRRMKQ AEYFGV++GM+ K+L AVVAAAA+ +E+++EE+EE      A PS  
Subjt:  MGKEKRKGMPADNGGGICEKKTKKDETAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEEKEE-----TAVPSAE

Query:  VVKRRGKGKEVVEENGLRLDLNIAVAV-ESDG
         V RRGKGKEVVEENGLRLDLNIA+AV +SDG
Subjt:  VVKRRGKGKEVVEENGLRLDLNIAVAV-ESDG
KAG6589551.1 hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3166.92Show/hide
Query:  MGKEKRKGMPADNGGGICEKKTKKDETAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEE---KEETAVPSAEVV
        M + KRK   ++N G  CEKKTK DET AAA +EPTDEEVEEFY ILRRMK+AAEYFGV+KGM+TK+LR V AAAA+ EE+E+E+   K   A      +
Subjt:  MGKEKRKGMPADNGGGICEKKTKKDETAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEE---KEETAVPSAEVV

Query:  KRRGKGKEVVEENGLRLDLNIAVAVESDGR
        K+ GKGKEVV ENGLRLDLNIAVAVESDGR
Subjt:  KRRGKGKEVVEENGLRLDLNIAVAVESDGR
TYK28420.1 hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa]8.8e-2866.15Show/hide
Query:  MGKEKRKGMPADNGGGICEKKTKKDE-TAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEEKE-ETAVPSAEVVK
        MGKEKRK    ++   I EKKT+ D+ TA+ A EEPTDEEVEEFY+ILRRMKQ AEYFGV++GM+TK+L AVVAAAAN +E+++EEK   TA P+     
Subjt:  MGKEKRKGMPADNGGGICEKKTKKDE-TAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEEKE-ETAVPSAEVVK

Query:  RRGKG-KEVVEENGLR-LDLNIAVAVESDG
        +RGK  KEVVEENGLR LDLNIAVAV+SDG
Subjt:  RRGKG-KEVVEENGLR-LDLNIAVAVESDG
TrEMBL top hitse value%identityAlignment
A0A5A7USD1 Uncharacterized protein4.3e-2866.15Show/hide
Query:  MGKEKRKGMPADNGGGICEKKTKKDE-TAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEEKE-ETAVPSAEVVK
        MGKEKRK    ++   I EKKT+ D+ TA+ A EEPTDEEVEEFY+ILRRMKQ AEYFGV++GM+TK+L AVVAAAAN +E+++EEK   TA P+     
Subjt:  MGKEKRKGMPADNGGGICEKKTKKDE-TAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEEKE-ETAVPSAEVVK

Query:  RRGKG-KEVVEENGLR-LDLNIAVAVESDG
        +RGK  KEVVEENGLR LDLNIAVAV+SDG
Subjt:  RRGKG-KEVVEENGLR-LDLNIAVAVESDG
A0A5D3DYW7 Uncharacterized protein4.3e-2866.15Show/hide
Query:  MGKEKRKGMPADNGGGICEKKTKKDE-TAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEEKE-ETAVPSAEVVK
        MGKEKRK    ++   I EKKT+ D+ TA+ A EEPTDEEVEEFY+ILRRMKQ AEYFGV++GM+TK+L AVVAAAAN +E+++EEK   TA P+     
Subjt:  MGKEKRKGMPADNGGGICEKKTKKDE-TAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEEKE-ETAVPSAEVVK

Query:  RRGKG-KEVVEENGLR-LDLNIAVAVESDG
        +RGK  KEVVEENGLR LDLNIAVAV+SDG
Subjt:  RRGKG-KEVVEENGLR-LDLNIAVAVESDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGGAAAAGAGAAAGGGGATGCCGGCGGACAACGGCGGCGGAATTTGTGAAAAGAAGACTAAGAAGGACGAGACGGCGGCAGCGGCGGTGGAGGAACCGACCGA
TGAGGAGGTGGAGGAGTTCTATGTGATACTGCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGAGTGAAAAAGGGGATGATGACGAAGAATTTGAGAGCGGTAGTTGCAG
CGGCGGCGAATTTGGAAGAGAGAGAGGATGAGGAGAAGGAGGAGACGGCGGTGCCGTCAGCGGAGGTGGTGAAACGGCGTGGGAAGGGGAAGGAAGTGGTGGAGGAAAAT
GGGTTACGGTTGGATTTGAATATAGCGGTGGCGGTGGAGAGTGACGGCCGGTGA
mRNA sequenceShow/hide mRNA sequence
GAAGCATTCTTTTCTTTTCTTTTTTTCTCCTTACTCTTTATATTCCCCATTAATAAATCTCATCTTCCTTCAAGCATGAATTTTCCTTCTTTCTCTTTCTGTTCTTGAAT
TCTTTTCTTTTTTTGGGCGAAGGAAAAATTGAAAATGGGAAAGGAAAAGAGAAAGGGGATGCCGGCGGACAACGGCGGCGGAATTTGTGAAAAGAAGACTAAGAAGGACG
AGACGGCGGCAGCGGCGGTGGAGGAACCGACCGATGAGGAGGTGGAGGAGTTCTATGTGATACTGCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGAGTGAAAAAGGGG
ATGATGACGAAGAATTTGAGAGCGGTAGTTGCAGCGGCGGCGAATTTGGAAGAGAGAGAGGATGAGGAGAAGGAGGAGACGGCGGTGCCGTCAGCGGAGGTGGTGAAACG
GCGTGGGAAGGGGAAGGAAGTGGTGGAGGAAAATGGGTTACGGTTGGATTTGAATATAGCGGTGGCGGTGGAGAGTGACGGCCGGTGATGGAGAATTTCCGGTCAGATCG
AGATGATCGCCGGCGAAAAATTCCGACGTGGAACCGAACAACAAGCACGTGATCTCATAAATATACGAAGCTTTAAGTTTTCTTTTTCTTCTTCTAAAAAATATAAATAT
ATTATATAATATGTTGCTTTGTTTTCCAGATCTGATCCTCTATTCTGCCTGCGAAGCGTTCAATCAATTCAATATGGTTTTTAGTTGCGACTTA
Protein sequenceShow/hide protein sequence
MGKEKRKGMPADNGGGICEKKTKKDETAAAAVEEPTDEEVEEFYVILRRMKQAAEYFGVKKGMMTKNLRAVVAAAANLEEREDEEKEETAVPSAEVVKRRGKGKEVVEEN
GLRLDLNIAVAVESDGR