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Tan0014012 (gene) of Snake gourd v1 genome

Gene IDTan0014012
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:68059755..68060263
RNA-Seq ExpressionTan0014012
SyntenyTan0014012
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043852.1 hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa]6.0e-1449.5Show/hide
Query:  LVAMMFTSSLAKLASDD---LEQNEN-ENNQLLSDGSND--RVANYDIGNSRKRMKDAAPPPPRPQ----CFGDFCGGGLLPCDEPCYCNIPMGAQRGYC
        +  M+FT  LA +A ++    E+NEN E  QL SD SN+      Y    SRK +K+A  P P P     C+G+FCGGGLLPCDEPC+C+IP+GA RG C
Subjt:  LVAMMFTSSLAKLASDD---LEQNEN-ENNQLLSDGSND--RVANYDIGNSRKRMKDAAPPPPRPQ----CFGDFCGGGLLPCDEPCYCNIPMGAQRGYC

Query:  V
        V
Subjt:  V

KAG6580718.1 hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2155.86Show/hide
Query:  MEDKKLALVVVLVAMMFTSSLAKLASDDLEQNENENNQLLSDGSNDRVANYDIGNSRKRMKDAAP-------PPPRPQCFGDFCGGGLLPCDEPCYCNIP
        ME KK+ALVV+LV M FTS+LA+             NQL++DGSNDR A  D  +   +M + AP       P PRP CFG+FCGGGLLPCDEPC+C IP
Subjt:  MEDKKLALVVVLVAMMFTSSLAKLASDDLEQNENENNQLLSDGSNDRVANYDIGNSRKRMKDAAP-------PPPRPQCFGDFCGGGLLPCDEPCYCNIP

Query:  MGAQRGYCVDF
        MG+QRG CVDF
Subjt:  MGAQRGYCVDF

KGN59161.1 hypothetical protein Csa_002402 [Cucumis sativus]9.2e-2360.36Show/hide
Query:  MEDKKLALVVVLVAMMFTSSLAKLASDD----LEQNEN-ENNQLLSDGSNDRVANYDIGNSRKRMKDA----APPPPRPQCFGDFCGGGLLPCDEPCYCN
        ME KKLALVV++V  +FT SLA+ A +D     E+NEN E  QL SDGSND+   Y    SRK MK+A      PPP P CFG+FCGGGLL CDEPC+CN
Subjt:  MEDKKLALVVVLVAMMFTSSLAKLASDD----LEQNEN-ENNQLLSDGSNDRVANYDIGNSRKRMKDA----APPPPRPQCFGDFCGGGLLPCDEPCYCN

Query:  IPMGAQRGYCV
        IPMGA RG CV
Subjt:  IPMGAQRGYCV

TYK30388.1 hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa]1.8e-1853.57Show/hide
Query:  MEDKKLALVVVLVAMMFTSSLAKLASDD---LEQNEN-ENNQLLSDGSND--RVANYDIGNSRKRMKDAAPPPPRPQ----CFGDFCGGGLLPCDEPCYC
        ME KKLALVVV+  M+FT  LA +A ++    E+NEN E  QL SD SN+      Y    SRK +K+A  P P P     C+G+FCGGGLLPCDEPC+C
Subjt:  MEDKKLALVVVLVAMMFTSSLAKLASDD---LEQNEN-ENNQLLSDGSND--RVANYDIGNSRKRMKDAAPPPPRPQ----CFGDFCGGGLLPCDEPCYC

Query:  NIPMGAQRGYCV
        +IP+GA RG CV
Subjt:  NIPMGAQRGYCV

TrEMBL top hitse value%identityAlignment
A0A0A0LGQ3 Uncharacterized protein4.4e-2360.36Show/hide
Query:  MEDKKLALVVVLVAMMFTSSLAKLASDD----LEQNEN-ENNQLLSDGSNDRVANYDIGNSRKRMKDA----APPPPRPQCFGDFCGGGLLPCDEPCYCN
        ME KKLALVV++V  +FT SLA+ A +D     E+NEN E  QL SDGSND+   Y    SRK MK+A      PPP P CFG+FCGGGLL CDEPC+CN
Subjt:  MEDKKLALVVVLVAMMFTSSLAKLASDD----LEQNEN-ENNQLLSDGSNDRVANYDIGNSRKRMKDA----APPPPRPQCFGDFCGGGLLPCDEPCYCN

Query:  IPMGAQRGYCV
        IPMGA RG CV
Subjt:  IPMGAQRGYCV

A0A5A7TKL8 Uncharacterized protein2.9e-1449.5Show/hide
Query:  LVAMMFTSSLAKLASDD---LEQNEN-ENNQLLSDGSND--RVANYDIGNSRKRMKDAAPPPPRPQ----CFGDFCGGGLLPCDEPCYCNIPMGAQRGYC
        +  M+FT  LA +A ++    E+NEN E  QL SD SN+      Y    SRK +K+A  P P P     C+G+FCGGGLLPCDEPC+C+IP+GA RG C
Subjt:  LVAMMFTSSLAKLASDD---LEQNEN-ENNQLLSDGSND--RVANYDIGNSRKRMKDAAPPPPRPQ----CFGDFCGGGLLPCDEPCYCNIPMGAQRGYC

Query:  V
        V
Subjt:  V

A0A5D3E3L2 Uncharacterized protein8.7e-1953.57Show/hide
Query:  MEDKKLALVVVLVAMMFTSSLAKLASDD---LEQNEN-ENNQLLSDGSND--RVANYDIGNSRKRMKDAAPPPPRPQ----CFGDFCGGGLLPCDEPCYC
        ME KKLALVVV+  M+FT  LA +A ++    E+NEN E  QL SD SN+      Y    SRK +K+A  P P P     C+G+FCGGGLLPCDEPC+C
Subjt:  MEDKKLALVVVLVAMMFTSSLAKLASDD---LEQNEN-ENNQLLSDGSND--RVANYDIGNSRKRMKDAAPPPPRPQ----CFGDFCGGGLLPCDEPCYC

Query:  NIPMGAQRGYCV
        +IP+GA RG CV
Subjt:  NIPMGAQRGYCV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACAAGAAATTGGCTTTGGTGGTAGTGTTGGTGGCGATGATGTTTACGAGTTCTTTAGCAAAACTCGCCTCCGATGATCTCGAGCAAAATGAAAATGAGAACAA
TCAACTCCTCTCCGATGGTAGCAACGATCGAGTTGCGAACTACGATATCGGTAATTCGAGAAAAAGGATGAAAGACGCAGCGCCCCCGCCGCCACGGCCGCAATGTTTTG
GAGACTTCTGTGGTGGTGGACTACTCCCCTGTGACGAACCCTGTTATTGCAACATCCCAATGGGTGCACAAAGGGGATATTGTGTTGACTTTTAA
mRNA sequenceShow/hide mRNA sequence
AAACAGAGCAAACCGTTTAAGAGAAGAGCGAGAGAAATTAAACGAGAGAAAACAAGATGGAGGACAAGAAATTGGCTTTGGTGGTAGTGTTGGTGGCGATGATGTTTACG
AGTTCTTTAGCAAAACTCGCCTCCGATGATCTCGAGCAAAATGAAAATGAGAACAATCAACTCCTCTCCGATGGTAGCAACGATCGAGTTGCGAACTACGATATCGGTAA
TTCGAGAAAAAGGATGAAAGACGCAGCGCCCCCGCCGCCACGGCCGCAATGTTTTGGAGACTTCTGTGGTGGTGGACTACTCCCCTGTGACGAACCCTGTTATTGCAACA
TCCCAATGGGTGCACAAAGGGGATATTGTGTTGACTTTTAATATCCTTAAATTTACATCCCTTTTTCCAAGTTACCTTTATGTATGCCTTAACGGCTATTTGCTTTCCTT
TCATGGGACGAATGTTTGCAAAAATAAATAAAGTGGAGGTCAGTAATAATTGATCTTTTTCTAGTTAAA
Protein sequenceShow/hide protein sequence
MEDKKLALVVVLVAMMFTSSLAKLASDDLEQNENENNQLLSDGSNDRVANYDIGNSRKRMKDAAPPPPRPQCFGDFCGGGLLPCDEPCYCNIPMGAQRGYCVDF