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Tan0014064 (gene) of Snake gourd v1 genome

Gene IDTan0014064
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLYR motif-containing 5A
Genome locationLG10:10630032..10635693
RNA-Seq ExpressionTan0014064
SyntenyTan0014064
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138283.1 uncharacterized protein LOC111009499 [Momordica charantia]1.3e-4196.7Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
        MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNT+LVVSMVRQQFRK+MHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQS+
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
XP_022964695.1 uncharacterized protein LOC111464671 [Cucurbita moschata]9.4e-4092.31Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
        MPSLQTALPPELANNVIRLYRECLRRAK+IGH+QHNTDLVVSMV+QQFRK+MHETDPEKIQKLKDDAARGLINHILYESERL+GRK SQS+
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
XP_022972196.1 uncharacterized protein LOC111470803 [Cucurbita maxima]3.2e-4093.41Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
        MPSLQTALPPELANNVIRLYRECLRRAKYIGH+QHNTDLVVSMV+QQFRK+MHETDPEKIQKLKDDAARGLINHILYESERL+GRK SQS+
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
XP_023921329.1 uncharacterized protein LOC112032794 [Quercus suber]2.1e-3991.21Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
        MPSLQTALPPELANNVIRLYRECLRRAKYIGH+QHNT+LVV MVRQQF+K MHETDPEKIQKLKDDAARGLINHILYESE++SGRKFS+SA
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
XP_038878962.1 uncharacterized protein LOC120071039 [Benincasa hispida]4.2e-4093.41Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
        MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNT+L+VSMVRQQFRK+M ETDPEKIQKLKDDAARGLINHILYESER+SGRKFSQS+
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
TrEMBL top hitse value%identityAlignment
A0A1U8NTK3 uncharacterized protein LOC1079105455.0e-3991.21Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
        MPSLQTALPPELANNVIRLYRECLRRAKYIGH+QHNT LVV MVRQQF+K MHETDPEKIQKLKDDAARGLINHILYESE+LSGRKFS S+
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
A0A6J1C9Q7 uncharacterized protein LOC1110094996.4e-4296.7Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
        MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNT+LVVSMVRQQFRK+MHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQS+
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
A0A6J1HLJ6 uncharacterized protein LOC1114646714.6e-4092.31Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
        MPSLQTALPPELANNVIRLYRECLRRAK+IGH+QHNTDLVVSMV+QQFRK+MHETDPEKIQKLKDDAARGLINHILYESERL+GRK SQS+
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
A0A6J1I5B4 uncharacterized protein LOC1114708031.6e-4093.41Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
        MPSLQTALPPELANNVIRLYRECLRRAKYIGH+QHNTDLVVSMV+QQFRK+MHETDPEKIQKLKDDAARGLINHILYESERL+GRK SQS+
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
A0A7N2R6B7 Uncharacterized protein1.3e-3990.11Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
        MPSLQTALPPELANNVIRLYRECLRRAKYIGH+QHNT+L+V MVRQQF+K MHETDPEKIQKLKDDAARGLINHILYESE++SGRKFS+SA
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17300.1 unknown protein2.1e-3782.02Show/hide
Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQ
        MPSLQT+LPPELANNV+RLYRECLRRAK+IG QQHNT+LVV MVRQQF+K M+ETDPEKIQKLKDDAARGLINH+L+ES +L+G K SQ
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQ
AT3G17300.2 unknown protein3.4e-1978.57Show/hide
Query:  QHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQ
        QHNT+LVV MVRQQF+K M+ETDPEKIQKLKDDAARGLINH+L+ES +L+G K SQ
Subjt:  QHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCTCTACAGACTGCTCTACCTCCTGAGCTTGCAAATAATGTCATTAGGCTTTACCGTGAGTGCCTTCGAAGAGCCAAGTATATTGGTCATCAGCAACATAACAC
TGATCTTGTTGTTAGTATGGTGAGGCAACAATTCAGAAAGAGCATGCATGAGACTGATCCAGAGAAGATTCAGAAGTTGAAAGATGATGCTGCAAGGGGACTCATAAACC
ATATTCTATATGAATCTGAGAGACTGTCAGGTCGAAAATTCAGCCAAAGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
AATTGATAGCTTTCAAATGGATGAAATTGAAAGGTCACATTAAAACTGTTTTTTTTTTTTCGTATCTTTCACGATTATCCCTTTTGTACAAGGGGCTAGGGCTTTTTCCT
CTTCCTGTCGATTTGGACAGTCTCTCTCGCTCGATTCTTGGCTTGGCAGGTTTCTGATCACTTCGCTTAATTAATAATTTTGATAAATAATCAGTAGTGTGAAAAGGGTG
GAAATGCCATCTCTACAGACTGCTCTACCTCCTGAGCTTGCAAATAATGTCATTAGGCTTTACCGTGAGTGCCTTCGAAGAGCCAAGTATATTGGTCATCAGCAACATAA
CACTGATCTTGTTGTTAGTATGGTGAGGCAACAATTCAGAAAGAGCATGCATGAGACTGATCCAGAGAAGATTCAGAAGTTGAAAGATGATGCTGCAAGGGGACTCATAA
ACCATATTCTATATGAATCTGAGAGACTGTCAGGTCGAAAATTCAGCCAAAGTGCTTGATGTTATTGAGAACGACATCGAGTAAAAGGTCTCTACTGAAACTTTAGATAT
TGCAGGAAAATAAGATGGCTGTTGATGAAAGTACTCCTTGGAGTATACCTGTTTATAACATAGATCCGAGGCAGAAGAATGACCAACCTGTGGACTTGTGGGTCAATTTC
GACTAAGCAGTTGAAAGTTGAAACAGAGTTGAGAAGAATTGTACCTATAAAATTCCTAGCAACAGCAATGGCTTAGCTACGTTGGAATTCATGGAAACAATACAAATCAA
AATTCATAATACTCATTCTATGATAACGCCCTTTACTAAGGTGTTAAATTTTTGCTCATGTTAATATGTTTATGTTTGAGTTCAACATCAACAAGTCTATTATATAACAC
ATCATTATTAATTTAAATGATCTTAAGAA
Protein sequenceShow/hide protein sequence
MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKSMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSA