; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0014122 (gene) of Snake gourd v1 genome

Gene IDTan0014122
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-type domain-containing protein
Genome locationLG02:4608175..4609901
RNA-Seq ExpressionTan0014122
SyntenyTan0014122
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572211.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia]5.8e-7488.31Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS
        MGLSSLPAPSEGVLN +L+N ALSIS+FKCIVRLILHIVGIR SSPSSLVPS+DS +NSSELGD NFGSSWSY+E FRNRYP IRFDKVQGSER EHDCS
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS

Query:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW
        VCLT FEPESEINHLSCGHLFH ECLEKWLDYWNITCPLCRTPLMSEEEK C W
Subjt:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW

XP_022952716.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata]2.9e-7387.01Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS
        MGLSSLPAPSEGVLN +L+N ALSIS+F+CIVRLILHI+GIR SSPSSLVPS+DS +NSSELGD NFGSSWSY+E FRNRYP IRFDKVQGSER EHDCS
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS

Query:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW
        VCLT FEPESEINHLSCGHLFH ECLEKWLDYWNITCPLCRTPLMSEEEK C W
Subjt:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW

XP_022969282.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima]7.6e-7488.31Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS
        MGLSSLPAPSEGVLN +L+N ALSIS+FKCIVRLILHIVGIR SSPSSLVPS+DS +NSSELGD NFGSSWSY+E FRNRYP IRFDKVQGSER EHDCS
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS

Query:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW
        VCLT FEPESEINHLSCGHLFH ECLEKWLDYWNITCPLCRTPLMSEEEK C W
Subjt:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW

XP_023554631.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita pepo subsp. pepo]1.3e-7387.66Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS
        MGLSSLPAPSEGVLN +L+N ALSIS+FKCIVRLILHI+GIR SSPSSLVPS+DS +NSSELGD NFGSSWSY+E FRNRYP IRFDKVQGSER EHDCS
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS

Query:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW
        VCLT FEPESEINHLSCGHLFH ECLEKWLDYWNITCPLCRTPLMSEEEK C W
Subjt:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW

XP_038887530.1 probable E3 ubiquitin-protein ligase XERICO isoform X1 [Benincasa hispida]4.6e-7186.36Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS
        MGLSSLPAPSEGVLNV+LVNTALSISMFKCIVRLILH++GIRLS PSSLV S+DS ++SSELGD NFGSSWSY+E FRNRY  IRFDK+QGSER EHDCS
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS

Query:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW
        VCLT FEPESEIN LSCGHLFH ECLEKWLDYWNITCPLCRTPLMSEEEK C W
Subjt:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW

TrEMBL top hitse value%identityAlignment
A0A1S3CGH9 probable E3 ubiquitin-protein ligase XERICO isoform X14.2e-7084.42Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS
        MGLSSLPAPSEGVLNV+LVNTALSISM KCIVRLILH+VGIRLS PSS+V S+DS +NSSELGD NFGSSW+Y+E FRNRYP IRFDKV+ S+  EHDCS
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS

Query:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW
        VCLT FEPES INHLSCGHLFH ECLEKWLDYWNITCPLCRTPLMSEEEK C W
Subjt:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW

A0A1S4E4A9 probable E3 ubiquitin-protein ligase XERICO isoform X34.2e-7084.42Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS
        MGLSSLPAPSEGVLNV+LVNTALSISM KCIVRLILH+VGIRLS PSS+V S+DS +NSSELGD NFGSSW+Y+E FRNRYP IRFDKV+ S+  EHDCS
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS

Query:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW
        VCLT FEPES INHLSCGHLFH ECLEKWLDYWNITCPLCRTPLMSEEEK C W
Subjt:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW

A0A6J1C3G2 probable E3 ubiquitin-protein ligase XERICO2.5e-7085.71Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS
        MGLSSLPAPSEGVLNVL+VNTALSISM KCIVRLIL IVGIRLSSPSSLVPSSD ++N SELGD +FGSSWSY E FRNRYP IRFD V GS+R EHDCS
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS

Query:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW
        VCL+ FEPESEINHLSCGHLFH ECLEKWLDYWN TCPLCRTPLMSEEEK C W
Subjt:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW

A0A6J1GLE2 probable E3 ubiquitin-protein ligase XERICO1.4e-7387.01Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS
        MGLSSLPAPSEGVLN +L+N ALSIS+F+CIVRLILHI+GIR SSPSSLVPS+DS +NSSELGD NFGSSWSY+E FRNRYP IRFDKVQGSER EHDCS
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS

Query:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW
        VCLT FEPESEINHLSCGHLFH ECLEKWLDYWNITCPLCRTPLMSEEEK C W
Subjt:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW

A0A6J1HVX6 probable E3 ubiquitin-protein ligase XERICO3.7e-7488.31Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS
        MGLSSLPAPSEGVLN +L+N ALSIS+FKCIVRLILHIVGIR SSPSSLVPS+DS +NSSELGD NFGSSWSY+E FRNRYP IRFDKVQGSER EHDCS
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCS

Query:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW
        VCLT FEPESEINHLSCGHLFH ECLEKWLDYWNITCPLCRTPLMSEEEK C W
Subjt:  VCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW

SwissProt top hitse value%identityAlignment
Q9LY41 E3 ubiquitin-protein ligase ATL41.8e-0932.21Show/hide
Query:  SSLPAPSEGVLNVLLV-NTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKV--QGSERHEHDCS
        SSL +    VL ++L+    L IS+  C +   L+    R   P S   S  ++ + S     +  S  +   +  +  P+ +F  V  + S  +  DC+
Subjt:  SSLPAPSEGVLNVLLV-NTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKV--QGSERHEHDCS

Query:  VCLTPFEPESEINHLS-CGHLFHRECLEKWLDYWNITCPLCRTPLMSEE
        VCL+ FEPE ++  L  C H FH +C++ WL   N TCPLCR+PL + E
Subjt:  VCLTPFEPESEINHLS-CGHLFHRECLEKWLDYWNITCPLCRTPLMSEE

Q9SI09 Probable E3 ubiquitin-protein ligase XERICO2.6e-4058.67Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRL----SSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKV-QGSERH
        MGLSSLP PSEG+L V+LVNTALSIS+ K IVR  L IVGI L    SSPSS+  SS++  ++SE  D+      SY+E FRNR P +RF+ + +  ++ 
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRL----SSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKV-QGSERH

Query:  EHDCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLM
        +++CSVCL+ F+ +SEIN L CGHLFH+ CLEKW+DYWNITCPLCRTPL+
Subjt:  EHDCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLM

Q9XF92 Brassinosteroid-responsive RING protein 14.5e-1346.58Show/hide
Query:  RNRYPMIRFDKVQGS-ERHEHDCSVCLTPFEPESEINHL-SCGHLFHRECLEKWLDYWNITCPLCRTPLMSEE
        R   P+I+F+++  S E    +C+VCL  FE E EI  L +C H+FHR CL++W+D+   TCPLCRTP + +E
Subjt:  RNRYPMIRFDKVQGS-ERHEHDCSVCLTPFEPESEINHL-SCGHLFHRECLEKWLDYWNITCPLCRTPLMSEE

Q9ZT50 E3 ubiquitin-protein ligase RHA2A7.3e-1149.02Show/hide
Query:  DCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEE
        DC VCL+  +   E+  L C H+FH++CLE WL  +N TCPLCR+ L+S++
Subjt:  DCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEE

Q9ZU51 E3 ubiquitin-protein ligase RHA2B1.6e-1046.3Show/hide
Query:  SERHEHDCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLM
        S+    DC VCL+  +   E+  L C H+FH++CLE WL + N  CPLCR+PL+
Subjt:  SERHEHDCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLM

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A5.2e-1249.02Show/hide
Query:  DCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEE
        DC VCL+  +   E+  L C H+FH++CLE WL  +N TCPLCR+ L+S++
Subjt:  DCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEE

AT2G01150.1 RING-H2 finger protein 2B1.1e-1146.3Show/hide
Query:  SERHEHDCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLM
        S+    DC VCL+  +   E+  L C H+FH++CLE WL + N  CPLCR+PL+
Subjt:  SERHEHDCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLM

AT2G04240.1 RING/U-box superfamily protein1.8e-4158.67Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRL----SSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKV-QGSERH
        MGLSSLP PSEG+L V+LVNTALSIS+ K IVR  L IVGI L    SSPSS+  SS++  ++SE  D+      SY+E FRNR P +RF+ + +  ++ 
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRL----SSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKV-QGSERH

Query:  EHDCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLM
        +++CSVCL+ F+ +SEIN L CGHLFH+ CLEKW+DYWNITCPLCRTPL+
Subjt:  EHDCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLM

AT2G04240.2 RING/U-box superfamily protein1.8e-4158.67Show/hide
Query:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRL----SSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKV-QGSERH
        MGLSSLP PSEG+L V+LVNTALSIS+ K IVR  L IVGI L    SSPSS+  SS++  ++SE  D+      SY+E FRNR P +RF+ + +  ++ 
Subjt:  MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRL----SSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKV-QGSERH

Query:  EHDCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLM
        +++CSVCL+ F+ +SEIN L CGHLFH+ CLEKW+DYWNITCPLCRTPL+
Subjt:  EHDCSVCLTPFEPESEINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLM

AT3G61460.1 brassinosteroid-responsive RING-H23.2e-1446.58Show/hide
Query:  RNRYPMIRFDKVQGS-ERHEHDCSVCLTPFEPESEINHL-SCGHLFHRECLEKWLDYWNITCPLCRTPLMSEE
        R   P+I+F+++  S E    +C+VCL  FE E EI  L +C H+FHR CL++W+D+   TCPLCRTP + +E
Subjt:  RNRYPMIRFDKVQGS-ERHEHDCSVCLTPFEPESEINHL-SCGHLFHRECLEKWLDYWNITCPLCRTPLMSEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTCTCCAGTCTCCCAGCTCCATCTGAAGGAGTCCTTAACGTGCTTCTTGTAAACACTGCACTATCCATTTCCATGTTCAAATGCATCGTTCGTTTGATCCTTCA
CATTGTAGGAATCCGTCTCTCATCGCCATCATCCTTGGTCCCATCATCAGATTCCTTGGATAATTCCTCAGAGTTAGGAGATTACAATTTTGGTTCCTCTTGGAGTTACA
TAGAGACATTTCGGAATCGATATCCAATGATTAGGTTTGATAAAGTACAGGGCTCTGAACGTCATGAACACGACTGCTCGGTCTGCTTAACTCCGTTCGAACCTGAGTCG
GAGATAAATCACTTATCTTGTGGCCACCTTTTTCACAGAGAATGCTTGGAGAAGTGGCTGGACTACTGGAACATTACATGTCCTCTTTGCAGAACTCCTCTAATGTCCGA
AGAAGAGAAATGGTGCTTGTGGTGA
mRNA sequenceShow/hide mRNA sequence
CACTGAATCAGTCGAATCAAGATGAACTGATCATCAATCTTTCTTGACCATCTCAACAATTCCACTATTTTTCTTCAGATTTTTGTTCTTTTCGATCCTATTCTCTCTGA
TTCTCTCTGTTTCTCTTCGTTCTTGAAGATTGAACCCTTTGAAGTAAGTTTCCGGTCGCCTCCTTTTCGTTTTCGGCTTCTTTATGGAGAAATGTTCACTTTCCATTAAT
GGGGTTTATCTGGTTTCTCAATTTGGTTTGATGTGAAGAAGAGGTTGCAGTCTGCTAGATTTTTTCTGTCTGTATCGAGTCTGAGAAGTTCAGTTCAACCACGATGGGCC
TCTCCAGTCTCCCAGCTCCATCTGAAGGAGTCCTTAACGTGCTTCTTGTAAACACTGCACTATCCATTTCCATGTTCAAATGCATCGTTCGTTTGATCCTTCACATTGTA
GGAATCCGTCTCTCATCGCCATCATCCTTGGTCCCATCATCAGATTCCTTGGATAATTCCTCAGAGTTAGGAGATTACAATTTTGGTTCCTCTTGGAGTTACATAGAGAC
ATTTCGGAATCGATATCCAATGATTAGGTTTGATAAAGTACAGGGCTCTGAACGTCATGAACACGACTGCTCGGTCTGCTTAACTCCGTTCGAACCTGAGTCGGAGATAA
ATCACTTATCTTGTGGCCACCTTTTTCACAGAGAATGCTTGGAGAAGTGGCTGGACTACTGGAACATTACATGTCCTCTTTGCAGAACTCCTCTAATGTCCGAAGAAGAG
AAATGGTGCTTGTGGTGAGCGTTTCGTGTGCTAGAATCTAGTTAGGGAAAACTCATGTACAGCATACTCTTAAAGATAATCGTGAACGCGTTTTCTACCTTCTTTGTGTA
TGAGATTTTAAGTTTGATGTGTCTGACCGGTCTTAGAGACCAAAGTTTTGTCACTGTACATACATGTTTATGAAGTTCTATGCTTCTGGCTTGTGCCTTTAGCTTTGAGT
TAATGCACTGTTACTTCACTTTCTTTGTATATGGAATTGACTGAGTATGCACTAAGTTTTTCAAGTTCTGTTTGTTTGATACTGAGATTGACCGCATGTACAGCAATTTA
ATAGAATTACAGTTCTTAGTGATTTTGGGGATTGTTCTGTTCAAATCTTG
Protein sequenceShow/hide protein sequence
MGLSSLPAPSEGVLNVLLVNTALSISMFKCIVRLILHIVGIRLSSPSSLVPSSDSLDNSSELGDYNFGSSWSYIETFRNRYPMIRFDKVQGSERHEHDCSVCLTPFEPES
EINHLSCGHLFHRECLEKWLDYWNITCPLCRTPLMSEEEKWCLW