; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0014188 (gene) of Snake gourd v1 genome

Gene IDTan0014188
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG03:20902701..20904840
RNA-Seq ExpressionTan0014188
SyntenyTan0014188
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
GO:0005488 - binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038417.1 putative gag-pol polyprotein [Cucumis melo var. makuwa]1.2e-2166.27Show/hide
Query:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG
        +N+SSRQDFKNR+GGQASR +++   +QRQSQR PSQ  RST R Q   ESVAS  R+TPC +C +NHRGQCL GV VCYQCG
Subjt:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG

KAA0042138.1 uncharacterized protein E6C27_scaffold67G006260 [Cucumis melo var. makuwa]5.5e-2266.27Show/hide
Query:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG
        +N+SSRQDFKNR+GGQASR +++   +QRQSQR PSQ  RST R Q   ES+AS  RRT C NC +NHRGQCL G DVCYQCG
Subjt:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG

KAA0046777.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.0e-2063.86Show/hide
Query:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG
        +N+SSRQDFKNR+GGQASR +++   +QRQSQR PSQ  RST R Q   ES+AS  RR PC +C +NHRGQCL G  VCYQCG
Subjt:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG

KAA0050492.1 uncharacterized protein E6C27_scaffold175G001240 [Cucumis melo var. makuwa]1.0e-2063.86Show/hide
Query:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG
        +N+SSRQDFKNR+GGQASR +++   +QRQSQR PSQ  RST R Q   ES+AS  RR PC +C +NHRGQCL G  VCYQCG
Subjt:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG

KAA0066282.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.9e-2163.86Show/hide
Query:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG
        +N+SSRQDFKNR+GGQASR +++   +QRQSQR PSQ  RST R Q   ES+AS  RR PC +C +NHRGQCL G  VCYQCG
Subjt:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG

TrEMBL top hitse value%identityAlignment
A0A5A7TA17 Putative gag-pol polyprotein5.9e-2266.27Show/hide
Query:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG
        +N+SSRQDFKNR+GGQASR +++   +QRQSQR PSQ  RST R Q   ESVAS  R+TPC +C +NHRGQCL GV VCYQCG
Subjt:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG

A0A5A7TH36 CCHC-type domain-containing protein2.6e-2266.27Show/hide
Query:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG
        +N+SSRQDFKNR+GGQASR +++   +QRQSQR PSQ  RST R Q   ES+AS  RRT C NC +NHRGQCL G DVCYQCG
Subjt:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG

A0A5A7U2V7 Reverse transcriptase5.0e-2163.86Show/hide
Query:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG
        +N+SSRQDFKNR+GGQASR +++   +QRQSQR PSQ  RST R Q   ES+AS  RR PC +C +NHRGQCL G  VCYQCG
Subjt:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG

A0A5A7VD61 Reverse transcriptase3.8e-2163.86Show/hide
Query:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG
        +N+SSRQDFKNR+GGQASR +++   +QRQSQR PSQ  RST R Q   ES+AS  RR PC +C +NHRGQCL G  VCYQCG
Subjt:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG

A0A5D3BS67 Reverse transcriptase5.0e-2163.86Show/hide
Query:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG
        +N+SSRQDFKNR+GGQASR +++   +QRQSQR PSQ  RST R Q   ES+AS  RR PC +C +NHRGQCL G  VCYQCG
Subjt:  MNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNHRGQCLEGVDVCYQCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAGACATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATTGAGCTCCCGGTGCCTGATAACCTGCCATATTCAATAGAACTAGCAGAGCATGA
TCCAAGTAAGGATAATATGAATGTTTCAAGTCGCCAGGACTTTAAGAATCGAGCTGGTGGCCAGGCATCGAGGCAGATAAATTTTAGTGGTGCCTATCAAAGGCAGAGTC
AGAGAGCACCTAGTCAGTCTGCCAGATCCACAACAAGACCACAGAGAATGCATGAGTCTGTTGCCAGTGCAGCAAGGAGAACTCCATGTGCGAATTGTGACAAGAATCAT
CGAGGCCAATGTCTTGAGGGTGTCGATGTGTGTTACCAGTGTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAAGACATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATTGAGCTCCCGGTGCCTGATAACCTGCCATATTCAATAGAACTAGCAGAGCATGA
TCCAAGTAAGGATAATATGAATGTTTCAAGTCGCCAGGACTTTAAGAATCGAGCTGGTGGCCAGGCATCGAGGCAGATAAATTTTAGTGGTGCCTATCAAAGGCAGAGTC
AGAGAGCACCTAGTCAGTCTGCCAGATCCACAACAAGACCACAGAGAATGCATGAGTCTGTTGCCAGTGCAGCAAGGAGAACTCCATGTGCGAATTGTGACAAGAATCAT
CGAGGCCAATGTCTTGAGGGTGTCGATGTGTGTTACCAGTGTGGATAG
Protein sequenceShow/hide protein sequence
MTKTLSPRLYGTVCTQVEIELPVPDNLPYSIELAEHDPSKDNMNVSSRQDFKNRAGGQASRQINFSGAYQRQSQRAPSQSARSTTRPQRMHESVASAARRTPCANCDKNH
RGQCLEGVDVCYQCG