; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0014196 (gene) of Snake gourd v1 genome

Gene IDTan0014196
OrganismTrichosanthes anguina (Snake gourd v1)
Description50S ribosomal protein L33-like
Genome locationLG01:7962974..7964148
RNA-Seq ExpressionTan0014196
SyntenyTan0014196
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR018264 - Ribosomal protein L33, conserved site
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577004.1 hypothetical protein SDJN03_24578, partial [Cucurbita argyrosperma subsp. sororia]9.5e-6484.81Show/hide
Query:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK
        M  TI+RLCLD ALSCG RNRFLCNS+SSTP + V+FK LSFSA LSLSV+PNVK SLSQSAR+RSI YGSVICMAKRYAPNTTKRKRL RKRGGDP+ K
Subjt:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK

Query:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK
        KKTRRKGGRKDFKI+RL+S AGTGFFYAKKKSRKMA KIELQK+DPLAKRHVLFTEVK
Subjt:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK

KAG7015026.1 rpmG, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-6485.44Show/hide
Query:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK
        M  TI+RLCLD ALSCG RNRFLCNS+SSTP + V+FK LSFSA LSLSV+PNVK SLSQSAR+RSIRYGSVICMAKRYAPNTTKRKRL RKRGGDP+ K
Subjt:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK

Query:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK
        KKTRRKGGRKDFKI+RL+S AGTGFFYAKKKSRKMA KIELQK+DPLAKRHVLFTEVK
Subjt:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK

XP_022922689.1 uncharacterized protein LOC111430611 isoform X1 [Cucurbita moschata]4.4e-6182.17Show/hide
Query:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK
        M  TI+R CLD ALSCG RNRFLC+S+SSTP + V+FK LSFSA LSLSV+PNVK SLSQSAR+RSIR+GSVICMA+RYAPN TKRKRL RKRGGDP+ K
Subjt:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK

Query:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEV
        KKTRRKGGRKDFKI+RL+S AGTGFFYAKKKSRKMA KIELQK+DPLAKRHVLFTEV
Subjt:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEV

XP_022922690.1 uncharacterized protein LOC111430611 isoform X2 [Cucurbita moschata]1.2e-6182.28Show/hide
Query:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK
        M  TI+R CLD ALSCG RNRFLC+S+SSTP + V+FK LSFSA LSLSV+PNVK SLSQSAR+RSIR+GSVICMA+RYAPN TKRKRL RKRGGDP+ K
Subjt:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK

Query:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK
        KKTRRKGGRKDFKI+RL+S AGTGFFYAKKKSRKMA KIELQK+DPLAKRHVLFTEVK
Subjt:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK

XP_023552499.1 uncharacterized protein LOC111810144 [Cucurbita pepo subsp. pepo]2.3e-6282.91Show/hide
Query:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK
        M  TI+RLC D ALSCG RNRFLC+S+SSTP + V+FK LSFSA LSLSV+PNVK SLSQSAR+RSIR+GSV CMAKRYAPNTTKRKRL RKRGGDP+ K
Subjt:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK

Query:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK
        KKTRRKGGRKDFKI+RL+S AGTGFFYAKKKSRKMA KIELQK+DPLAKRHVLFTEVK
Subjt:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK

TrEMBL top hitse value%identityAlignment
A0A5A7UZ21 50S ribosomal protein L33-like3.8e-5880Show/hide
Query:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLS--LSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPD
        M TTIQR CLDL LSCG RN+FL NSSSS PSN +TF S SF ATLS  LS +PNVKG L Q A +RSIRYGSVICMAKRYAP+TTKRKRL RKRGGDP 
Subjt:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLS--LSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPD

Query:  NKKKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK
         KKKTRRKGGRKDFKIVRL+S A TGFFYAKKKSRKMA KIE+QKYDP+A RHVLFTEVK
Subjt:  NKKKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK

A0A6J1E445 uncharacterized protein LOC111430611 isoform X12.1e-6182.17Show/hide
Query:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK
        M  TI+R CLD ALSCG RNRFLC+S+SSTP + V+FK LSFSA LSLSV+PNVK SLSQSAR+RSIR+GSVICMA+RYAPN TKRKRL RKRGGDP+ K
Subjt:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK

Query:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEV
        KKTRRKGGRKDFKI+RL+S AGTGFFYAKKKSRKMA KIELQK+DPLAKRHVLFTEV
Subjt:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEV

A0A6J1E4T6 uncharacterized protein LOC111430611 isoform X25.6e-6282.28Show/hide
Query:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK
        M  TI+R CLD ALSCG RNRFLC+S+SSTP + V+FK LSFSA LSLSV+PNVK SLSQSAR+RSIR+GSVICMA+RYAPN TKRKRL RKRGGDP+ K
Subjt:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK

Query:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK
        KKTRRKGGRKDFKI+RL+S AGTGFFYAKKKSRKMA KIELQK+DPLAKRHVLFTEVK
Subjt:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK

A0A6J1J250 uncharacterized protein LOC111482725 isoform X22.4e-6080.38Show/hide
Query:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK
        M  TI+RLCL  AL CG RNRFLC+S+SSTP + V+FK LSFSA LSL V+PNVK SLSQSAR+RSIR+GSVICMA+RYAPNTTKRKRL RKRGGDP+ K
Subjt:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK

Query:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK
        +KTRRKGGRKDFKI+RL+S AGTGFFYAKKKSRKMA KIELQK+DPLAKRHVLFTE K
Subjt:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK

A0A6J1J566 uncharacterized protein LOC111482725 isoform X12.4e-6080.38Show/hide
Query:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK
        M  TI+RLCL  AL CG RNRFLC+S+SSTP + V+FK LSFSA LSL V+PNVK SLSQSAR+RSIR+GSVICMA+RYAPNTTKRKRL RKRGGDP+ K
Subjt:  MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNK

Query:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK
        +KTRRKGGRKDFKI+RL+S AGTGFFYAKKKSRKMA KIELQK+DPLAKRHVLFTE K
Subjt:  KKTRRKGGRKDFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK

SwissProt top hitse value%identityAlignment
B6IN38 50S ribosomal protein L336.5e-0754.35Show/hide
Query:  IVRLTSAAGTGFFYAKKKS-RKMAYKIELQKYDPLAKRHVLFTEVK
        +++L S+A TGFFY KKK+ RK   K+E +KYDP+A++HV+F E K
Subjt:  IVRLTSAAGTGFFYAKKKS-RKMAYKIELQKYDPLAKRHVLFTEVK

Q2W1A2 50S ribosomal protein L332.5e-0654.35Show/hide
Query:  IVRLTSAAGTGFFY-AKKKSRKMAYKIELQKYDPLAKRHVLFTEVK
        +++L S AGTGFFY AKK  RK   K+E +KYDP+ ++HV F E K
Subjt:  IVRLTSAAGTGFFY-AKKKSRKMAYKIELQKYDPLAKRHVLFTEVK

Q5FFJ4 50S ribosomal protein L332.9e-0754.35Show/hide
Query:  IVRLTSAAGTGFFYAKKKS-RKMAYKIELQKYDPLAKRHVLFTEVK
        +V+L S+AGTG+FY KK++ +K+  K+  +KYDP+A++HVLFTE K
Subjt:  IVRLTSAAGTGFFYAKKKS-RKMAYKIELQKYDPLAKRHVLFTEVK

Q5HBV6 50S ribosomal protein L332.9e-0754.35Show/hide
Query:  IVRLTSAAGTGFFYAKKKS-RKMAYKIELQKYDPLAKRHVLFTEVK
        +V+L S+AGTG+FY KK++ +K+  K+  +KYDP+A++HVLFTE K
Subjt:  IVRLTSAAGTGFFYAKKKS-RKMAYKIELQKYDPLAKRHVLFTEVK

Q9RSS4 50S ribosomal protein L333.2e-0654.35Show/hide
Query:  IVRLTSAAGTGFFYAKKKSRKMAY-KIELQKYDPLAKRHVLFTEVK
        IV++ S+AGTGF+Y   K+R+    K+EL+KYDP+AK+HV+F E K
Subjt:  IVRLTSAAGTGFFYAKKKSRKMAY-KIELQKYDPLAKRHVLFTEVK

Arabidopsis top hitse value%identityAlignment
AT3G06320.1 Ribosomal protein L33 family protein5.0e-1060.78Show/hide
Query:  RKDFKIVRLTSAAGTGFFYAKKKSRK-MAYKIELQKYDPLAKRHVLFTEVK
        +K F  +RL SAAGTGFFY K+KS K +  K+E +KYDP   RHVLFTE K
Subjt:  RKDFKIVRLTSAAGTGFFYAKKKSRK-MAYKIELQKYDPLAKRHVLFTEVK

AT5G18790.1 Ribosomal protein L33 family protein5.0e-1060.78Show/hide
Query:  RKDFKIVRLTSAAGTGFFYAKKKSRK-MAYKIELQKYDPLAKRHVLFTEVK
        +K F  +RL SAAGTGFFY K+KS K +  K+E +KYDP   RHVLFTE K
Subjt:  RKDFKIVRLTSAAGTGFFYAKKKSRK-MAYKIELQKYDPLAKRHVLFTEVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGACAACAATTCAAAGGCTTTGTTTGGACTTGGCACTTTCTTGTGGAATAAGGAATCGATTTCTCTGTAATTCATCCTCTTCAACTCCTTCAAACTCCGTCACTTT
CAAGTCTCTCTCCTTCTCTGCTACCCTCTCGCTGAGCGTCATTCCCAATGTCAAAGGATCGTTGTCACAGAGCGCTCGGGACAGATCAATCCGTTATGGATCCGTAATTT
GCATGGCCAAAAGATATGCTCCTAACACTACAAAGAGAAAGAGGTTGGGTAGGAAGAGGGGTGGTGATCCAGACAATAAAAAGAAGACAAGGAGGAAAGGGGGAAGGAAG
GATTTTAAAATAGTCCGACTCACCTCAGCTGCTGGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTTATAAGATTGAGCTCCAGAAGTATGACCCTCT
TGCAAAACGTCATGTTCTGTTCACCGAGGTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGACAACAATTCAAAGGCTTTGTTTGGACTTGGCACTTTCTTGTGGAATAAGGAATCGATTTCTCTGTAATTCATCCTCTTCAACTCCTTCAAACTCCGTCACTTT
CAAGTCTCTCTCCTTCTCTGCTACCCTCTCGCTGAGCGTCATTCCCAATGTCAAAGGATCGTTGTCACAGAGCGCTCGGGACAGATCAATCCGTTATGGATCCGTAATTT
GCATGGCCAAAAGATATGCTCCTAACACTACAAAGAGAAAGAGGTTGGGTAGGAAGAGGGGTGGTGATCCAGACAATAAAAAGAAGACAAGGAGGAAAGGGGGAAGGAAG
GATTTTAAAATAGTCCGACTCACCTCAGCTGCTGGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTTATAAGATTGAGCTCCAGAAGTATGACCCTCT
TGCAAAACGTCATGTTCTGTTCACCGAGGTCAAGTGA
Protein sequenceShow/hide protein sequence
MGTTIQRLCLDLALSCGIRNRFLCNSSSSTPSNSVTFKSLSFSATLSLSVIPNVKGSLSQSARDRSIRYGSVICMAKRYAPNTTKRKRLGRKRGGDPDNKKKTRRKGGRK
DFKIVRLTSAAGTGFFYAKKKSRKMAYKIELQKYDPLAKRHVLFTEVK