; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0014197 (gene) of Snake gourd v1 genome

Gene IDTan0014197
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDynein light chain
Genome locationLG11:18188139..18191413
RNA-Seq ExpressionTan0014197
SyntenyTan0014197
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150121.1 dynein light chain 1, cytoplasmic [Cucumis sativus]4.0e-6395.52Show/hide
Query:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MDGAEMELERRSKFLNGLILKKKA +QQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSM GKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSR  SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD

XP_022146325.1 dynein light chain LC6, flagellar outer arm [Momordica charantia]2.4e-6394.03Show/hide
Query:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFLNGLI KKKAV+QQE+RDRLN+RVRASDMPFPLQNRAFSCARELLDSM GKLDSKR ALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSR TSLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD

XP_022939677.1 dynein light chain LC6, flagellar outer arm [Cucurbita moschata]5.8e-6293.28Show/hide
Query:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERR+KFLNGLILKKKA + QE RDRLNVRVRASDMPFPLQNRAFSCARELLDSM GKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSR  SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD

XP_023551552.1 dynein light chain LC6, flagellar outer arm [Cucurbita pepo subsp. pepo]2.6e-6294.03Show/hide
Query:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFLNGLILKKKA + QE RDRLNVRVRASDMPFPLQNRAFSCARELLDSM GKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSR  SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD

XP_038906759.1 dynein light chain LC6, flagellar outer arm [Benincasa hispida]4.7e-6496.27Show/hide
Query:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MDGAEMELERRSKFL+GLILKKKA +QQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSM GKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSR TSLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD

TrEMBL top hitse value%identityAlignment
A0A0A0KPF8 Dynein light chain1.9e-6395.52Show/hide
Query:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MDGAEMELERRSKFLNGLILKKKA +QQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSM GKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSR  SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD

A0A1S3CSY6 Dynein light chain1.9e-6395.52Show/hide
Query:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MDGAEMELERRSKFLNGLILKKKA +QQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSM GKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSR  SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD

A0A6J1CWZ8 Dynein light chain1.1e-6394.03Show/hide
Query:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFLNGLI KKKAV+QQE+RDRLN+RVRASDMPFPLQNRAFSCARELLDSM GKLDSKR ALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSR TSLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD

A0A6J1FHG9 Dynein light chain2.8e-6293.28Show/hide
Query:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERR+KFLNGLILKKKA + QE RDRLNVRVRASDMPFPLQNRAFSCARELLDSM GKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSR  SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD

A0A6J1I7W2 Dynein light chain4.8e-6292.54Show/hide
Query:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERRSKFLNGLILKKKA + QE RDRLN+RVRASDMPFPLQNRAFSCARELLDSM GKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSR  SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRATSLKD

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm1.2e-1445.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DMP  +Q  A  CA + L+  + + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V +LLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

O96860 Dynein light chain 2, cytoplasmic1.0e-1345.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM   +Q  A  CA + L+  + + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q22799 Dynein light chain 1, cytoplasmic8.0e-1445.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM   +Q  A  CA + L+  + + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q24117 Dynein light chain 1, cytoplasmic1.0e-1345.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM   +Q  A  CA + L+  + + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q86A88 Dynein light chain, cytoplasmic4.7e-1444.71Show/hide
Query:  VRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
        + V+ +DMP  +Q  A  C  +  +  + + D   +A+ +KKEFD  Y P WHCIVG SFGS+VTH    F+YF+I+K  +LLFK
Subjt:  VRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein3.4e-5276.56Show/hide
Query:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+G E+ELERRSKFLN LI KKKA +QQ+Q+D  NVRVRASDMP P QNRAFS +RE+L++  GK D+KRLA ALKK+FDS+YGPAWHCIVGTSFGSYVT
Subjt:  MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSR
        HS GGFLYF IDKVY+LLFKTAVEPL +
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSR

AT1G52240.2 RHO guanyl-nucleotide exchange factor 119.7e-1543.18Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEP
        V  SDMP  +Q +A + A + LD +    D K +A  +KKEFD  YG  W C+VG++FG + THS G F+YF ++ +  L+FK A  P
Subjt:  VRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEP

AT3G16120.1 Dynein light chain type 1 family protein6.3e-1443.02Show/hide
Query:  RVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA
        +V  +DMP  +Q +A   A + LD +    DS  +A  +KKEFD  YG  W C+VGT+FG + THS G F+YF +  +  L+FK A
Subjt:  RVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA

AT4G27360.1 Dynein light chain type 1 family protein4.1e-1345.78Show/hide
Query:  SDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAV
        +DM   ++  A S A + LD      +  ++A  +KKEFD SYG  W CIVGT FGS+VTH  G F++FS+  + ILLFK +V
Subjt:  SDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAV

AT5G20110.1 Dynein light chain type 1 family protein2.6e-2862.5Show/hide
Query:  DRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLS
        + L VR+ A+DMP  +Q  AF CAR  LDS+  K  SK +A  LKKEFD  YGPAWHCIVG+SFGS+VTHS G F+YFS+DK+Y+LLFKT V P S
Subjt:  DRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGAGCGGAAATGGAGCTTGAGCGGCGGAGCAAGTTTCTAAATGGGCTTATTCTGAAGAAGAAGGCGGTGGATCAGCAAGAGCAGCGCGATCGTCTTAATGTTCG
CGTCAGAGCCTCCGATATGCCGTTTCCTTTGCAGAATCGCGCTTTTAGCTGCGCTCGTGAACTGCTTGATTCGATGTCTGGGAAGCTCGATAGCAAACGCCTCGCTCTCG
CTCTTAAAAAGGAATTTGATTCCTCCTATGGTCCTGCTTGGCATTGCATTGTGGGAACTAGCTTTGGCTCCTATGTAACACATTCTTTGGGTGGCTTCTTGTATTTTTCA
ATAGACAAAGTTTACATTCTTCTCTTCAAAACGGCAGTCGAACCCCTGTCACGTGCAACATCGTTAAAAGATTGA
mRNA sequenceShow/hide mRNA sequence
CCTCCTTTGTCTTCCTCCTCGCGCCACTGTTTTCTTTTTCTTCTTCTTCCCCTTGTCTTCTTTCTCCTTCTGCCAGACATTTTGTCCAACACTTTATGGGCATTGTGTTT
AAAATCTTCTGATTCTGACTGTCTGAAGAAGAAGAAGAAGAAGAAGAAGAAAAACAAGGTGGGGTTGTTCCTGTGAAGATCTTTCTCCCAATTTGATGAGATTGTAGCGT
TGGTGGGACATGGACGGAGCGGAAATGGAGCTTGAGCGGCGGAGCAAGTTTCTAAATGGGCTTATTCTGAAGAAGAAGGCGGTGGATCAGCAAGAGCAGCGCGATCGTCT
TAATGTTCGCGTCAGAGCCTCCGATATGCCGTTTCCTTTGCAGAATCGCGCTTTTAGCTGCGCTCGTGAACTGCTTGATTCGATGTCTGGGAAGCTCGATAGCAAACGCC
TCGCTCTCGCTCTTAAAAAGGAATTTGATTCCTCCTATGGTCCTGCTTGGCATTGCATTGTGGGAACTAGCTTTGGCTCCTATGTAACACATTCTTTGGGTGGCTTCTTG
TATTTTTCAATAGACAAAGTTTACATTCTTCTCTTCAAAACGGCAGTCGAACCCCTGTCACGTGCAACATCGTTAAAAGATTGAGTAAACAAGGATCGAACAGGCATCGA
TTTGATCGTAAAATCGAACAGCTGCTAAAGTCATGAACAAGAACAACCAGGTTCAGTCATACTATTCTGGTTGGTTGTATCATTGACTTTATCTTGTTTAAGAAACAGAG
TGTGCAGGCTTTTGCTCTAATGTGAGTTGTGCATTAATTTACTGGCTGATTATGAAATTTTGTTGTGTGCAGTCCAATAGCAAGGATTTCTGATGTTATAAGATTTTATG
TTTCTGC
Protein sequenceShow/hide protein sequence
MDGAEMELERRSKFLNGLILKKKAVDQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMSGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFS
IDKVYILLFKTAVEPLSRATSLKD