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Tan0014225 (gene) of Snake gourd v1 genome

Gene IDTan0014225
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAutophagy-related protein
Genome locationLG01:16515212..16519531
RNA-Seq ExpressionTan0014225
SyntenyTan0014225
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
GO:0015031 - protein transport (biological process)
GO:0000421 - autophagosome membrane (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0031410 - cytoplasmic vesicle (cellular component)
InterPro domainsIPR004241 - Autophagy protein Atg8 ubiquitin-like
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PHT30315.1 Autophagy-related protein 8C [Capsicum baccatum]9.4e-2381.16Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF
        YLVPADL +GQFVYVV KRIKLG EK IF+F++NT PPT ALMS+IYEENKDED FLYMT SGENTFGF
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF

PHU26806.1 Autophagy-related protein 8C [Capsicum chinense]9.4e-2381.16Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF
        YLVPADL +GQFVYVV KRIKLG EK IF+F++NT PPT ALMS+IYEENKDED FLYMT SGENTFGF
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF

XP_016560128.1 PREDICTED: autophagy-related protein 8C-like [Capsicum annuum]9.4e-2381.16Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF
        YLVPADL +GQFVYVV KRIKLG EK IF+F++NT PPT ALMS+IYEENKDED FLYMT SGENTFGF
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF

XP_022954812.1 autophagy-related protein 8C [Cucurbita moschata]9.4e-2384.06Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF
        YLVPADL +GQFVYVV KRIKL  EK IFIFIQNT PPT ALMSSIYE+NKDED FLYMT SGENTFGF
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF

XP_022994202.1 autophagy-related protein 8C-like [Cucurbita maxima]9.4e-2384.06Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF
        YLVPADL +GQFVYVV KRIKL  EK IFIFIQNT PPT ALMSSIYE+NKDED FLYMT SGENTFGF
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF

TrEMBL top hitse value%identityAlignment
A0A2G2VBE4 Autophagy-related protein4.6e-2381.16Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF
        YLVPADL +GQFVYVV KRIKLG EK IF+F++NT PPT ALMS+IYEENKDED FLYMT SGENTFGF
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF

A0A2G3A8Y8 Autophagy-related protein4.6e-2381.16Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF
        YLVPADL +GQFVYVV KRIKLG EK IF+F++NT PPT ALMS+IYEENKDED FLYMT SGENTFGF
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF

A0A2G3D758 Autophagy-related protein4.6e-2381.16Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF
        YLVPADL +GQFVYVV KRIKLG EK IF+F++NT PPT ALMS+IYEENKDED FLYMT SGENTFGF
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF

A0A6J1GRX6 Autophagy-related protein4.6e-2384.06Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF
        YLVPADL +GQFVYVV KRIKL  EK IFIFIQNT PPT ALMSSIYE+NKDED FLYMT SGENTFGF
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF

A0A6J1JV40 Autophagy-related protein4.6e-2384.06Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF
        YLVPADL +GQFVYVV KRIKL  EK IFIFIQNT PPT ALMSSIYE+NKDED FLYMT SGENTFGF
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFGF

SwissProt top hitse value%identityAlignment
A2XXR7 Autophagy-related protein 8B2.8e-2582.35Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG
        YLVPADL +GQFVYVV KRIKL PEK IFIF++NT PPT ALMS+IYEENKDED FLYMT SGENTFG
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG

Q2XPP5 Autophagy-related protein 8A8.0e-2579.41Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG
        YLVPADL +GQFVYVV KRIKL PEK IF+F++NT PPT +LMS+IYEENKDED FLYMT SGENTFG
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG

Q69RC4 Autophagy-related protein 8A8.0e-2579.41Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG
        YLVPADL +GQFVYVV KRIKL PEK IF+F++NT PPT +LMS+IYEENKDED FLYMT SGENTFG
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG

Q7XPR1 Autophagy-related protein 8B2.8e-2582.35Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG
        YLVPADL +GQFVYVV KRIKL PEK IFIF++NT PPT ALMS+IYEENKDED FLYMT SGENTFG
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG

Q9XEB5 Autophagy-related protein 8b1.8e-2480.88Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG
        YLVPADL IGQFVYVV KRIKLG EK IF+F++NT PPT ALMS+IYEE+KDED FLYMT SGENTFG
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG

Arabidopsis top hitse value%identityAlignment
AT1G62040.1 Ubiquitin-like superfamily protein8.2e-2576.47Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG
        YLVPADL +GQFVYVV KRIKL  EK IF+F++NT PPT A+MS+IY+ENKDED FLYMT SGENTFG
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG

AT4G04620.1 Ubiquitin-like superfamily protein1.3e-2580.88Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG
        YLVPADL IGQFVYVV KRIKLG EK IF+F++NT PPT ALMS+IYEE+KDED FLYMT SGENTFG
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG

AT4G04620.2 Ubiquitin-like superfamily protein1.3e-2580.88Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG
        YLVPADL IGQFVYVV KRIKLG EK IF+F++NT PPT ALMS+IYEE+KDED FLYMT SGENTFG
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG

AT4G21980.1 Ubiquitin-like superfamily protein1.7e-2579.41Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG
        YLVPADL +GQFVYVV KRIKLG EK IF+F++NT PPT ALMS+IYEE+KDED FLYMT SGENTFG
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG

AT4G21980.2 Ubiquitin-like superfamily protein1.7e-2579.41Show/hide
Query:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG
        YLVPADL +GQFVYVV KRIKLG EK IF+F++NT PPT ALMS+IYEE+KDED FLYMT SGENTFG
Subjt:  YLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPTVALMSSIYEENKDEDDFLYMTNSGENTFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTTATTATTAGTTTTTTTTTTTTGCAACATGGTCGCCGTCGCTCGGTAAAATCCGCCCGGCCGCGAGCCAAGGAAACCTCGTTTAAAAGTCATGATTGTATGTG
TGTGCATATCCCAAACCTCGTACATAATTGGGTCGGGCATTGTAATTATCTCATGATTGTGTATATATACACTTATATTTCTACCATTTTCCATGATTTCATGTACCTTG
TACCTGCTGACCTGCCGATTGGGCAGTTTGTTTATGTTGTCCATAAAAGGATTAAGCTTGGTCCTGAGAAGGTTATTTTCATCTTCATCCAAAACACACAACCTCCAACT
GTTGCTTTGATGTCATCGATCTATGAAGAAAACAAGGATGAAGATGACTTTCTTTACATGACTAACAGTGGAGAGAACACCTTTGGATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTTATTATTAGTTTTTTTTTTTTGCAACATGGTCGCCGTCGCTCGGTAAAATCCGCCCGGCCGCGAGCCAAGGAAACCTCGTTTAAAAGTCATGATTGTATGTG
TGTGCATATCCCAAACCTCGTACATAATTGGGTCGGGCATTGTAATTATCTCATGATTGTGTATATATACACTTATATTTCTACCATTTTCCATGATTTCATGTACCTTG
TACCTGCTGACCTGCCGATTGGGCAGTTTGTTTATGTTGTCCATAAAAGGATTAAGCTTGGTCCTGAGAAGGTTATTTTCATCTTCATCCAAAACACACAACCTCCAACT
GTTGCTTTGATGTCATCGATCTATGAAGAAAACAAGGATGAAGATGACTTTCTTTACATGACTAACAGTGGAGAGAACACCTTTGGATTCTGA
Protein sequenceShow/hide protein sequence
MFFIISFFFLQHGRRRSVKSARPRAKETSFKSHDCMCVHIPNLVHNWVGHCNYLMIVYIYTYISTIFHDFMYLVPADLPIGQFVYVVHKRIKLGPEKVIFIFIQNTQPPT
VALMSSIYEENKDEDDFLYMTNSGENTFGF