; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0014265 (gene) of Snake gourd v1 genome

Gene IDTan0014265
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionnuclear transcription factor Y subunit B-4-like
Genome locationLG09:11786449..11786865
RNA-Seq ExpressionTan0014265
SyntenyTan0014265
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050890.1 nuclear transcription factor Y subunit B-4 [Cucumis melo var. makuwa]2.0e-4169.57Show/hide
Query:  NNGDE-LQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKA-
        NNGDE L+LPIANV R+MKKI+P +GKISKEAK+TMQECA EFISFVTSEAAQ+CH ENRRTLNGDDICWAF + GLDNYAE   KYL KYR+VERIK  
Subjt:  NNGDE-LQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKA-

Query:  EFKSNITQQQEEDDHDHDEQQEN-EFYYGDMGETSRPN
        E+K  ITQ+    D D  EQ++N     G++GETS PN
Subjt:  EFKSNITQQQEEDDHDHDEQQEN-EFYYGDMGETSRPN

KAG6590402.1 Nuclear transcription factor Y subunit B-4, partial [Cucurbita argyrosperma subsp. sororia]7.3e-5277.04Show/hide
Query:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK
        MG+NNGDELQLPIANVGRLMKKI+P + KISKEAK TMQECATEFISFVTSEAA+KCHK+NRRTLNGDDICWAFG+ GLDNYAEAS KYL KYR VERI 
Subjt:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK

Query:  AEFKSNITQQQEEDDHDHDEQQENEFYYGDMGETS
        A+FK+NI  +Q++  HD +++QE EFY+G++GETS
Subjt:  AEFKSNITQQQEEDDHDHDEQQENEFYYGDMGETS

XP_022961414.1 nuclear transcription factor Y subunit B-4-like [Cucurbita moschata]4.0e-5076.3Show/hide
Query:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK
        MG+NNGDELQLPIANVGRLMKKI+P + KISKEAK TMQECATEFISFVTSEAA+KCHK+NRRTLNGDDICWAFG+ GLDNYAEAS KYL KYR VERI 
Subjt:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK

Query:  AEFKSNITQQQEEDDHDHDEQQENEFYYGDMGETS
        A+FK+NI  +Q++ D      QE EFY+G++GETS
Subjt:  AEFKSNITQQQEEDDHDHDEQQENEFYYGDMGETS

XP_022968852.1 nuclear transcription factor Y subunit B-4-like [Cucurbita maxima]3.1e-5071.33Show/hide
Query:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK
        MG+NNGDELQLPIANVGRLMKKI+P + KISKEAK TMQECATEFISFVTSEAA+KCHK+NRRTLNGDDICWAFG+ GLDNYAEAS KYL KYR +ERI 
Subjt:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK

Query:  AEFKSNITQQQ--------EEDDHDHDEQQENEFYYGDMGETS
        A+FK+NI ++Q        +E + + +++QE EFY+G++GETS
Subjt:  AEFKSNITQQQ--------EEDDHDHDEQQENEFYYGDMGETS

XP_023546470.1 nuclear transcription factor Y subunit B-4-like [Cucurbita pepo subsp. pepo]2.2e-4873.91Show/hide
Query:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK
        MG+NNGDELQLPIANVGRLMKKI+P + KISKEAK TMQECATEFISFVTSEAA+KCHK+NRRTLNGDDICWAFG+ GLDNYAEAS KYL KYR VERI 
Subjt:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK

Query:  AEFKSNITQQQEEDDHDHDEQQENEFYYG-DMGETSRP
        A+FK+NI  +Q+  D D +++QE E     + GETS P
Subjt:  AEFKSNITQQQEEDDHDHDEQQENEFYYG-DMGETSRP

TrEMBL top hitse value%identityAlignment
A0A1S3BRX1 nuclear transcription factor Y subunit B-41.3e-4169.57Show/hide
Query:  NNGDE-LQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKA-
        NNGDE L+LPIANV R+MKKI+P +GKISKEAK+TMQECA EFISFVTSEAAQ+CH ENRRTLNGDDICWAF + GLDNYAE   KYL KYR+VERIK  
Subjt:  NNGDE-LQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKA-

Query:  EFKSNITQQQEEDDHDHDEQQEN-EFYYGDMGETSRPN
        E+K  ITQ+    D D  EQ++N     G++GETS PN
Subjt:  EFKSNITQQQEEDDHDHDEQQEN-EFYYGDMGETSRPN

A0A5A7U6S7 Nuclear transcription factor Y subunit B-49.7e-4269.57Show/hide
Query:  NNGDE-LQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKA-
        NNGDE L+LPIANV R+MKKI+P +GKISKEAK+TMQECA EFISFVTSEAAQ+CH ENRRTLNGDDICWAF + GLDNYAE   KYL KYR+VERIK  
Subjt:  NNGDE-LQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKA-

Query:  EFKSNITQQQEEDDHDHDEQQEN-EFYYGDMGETSRPN
        E+K  ITQ+    D D  EQ++N     G++GETS PN
Subjt:  EFKSNITQQQEEDDHDHDEQQEN-EFYYGDMGETSRPN

A0A5D3CG76 Nuclear transcription factor Y subunit B-41.3e-4169.57Show/hide
Query:  NNGDE-LQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKA-
        NNGDE L+LPIANV R+MKKI+P +GKISKEAK+TMQECA EFISFVTSEAAQ+CH ENRRTLNGDDICWAF + GLDNYAE   KYL KYR+VERIK  
Subjt:  NNGDE-LQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKA-

Query:  EFKSNITQQQEEDDHDHDEQQEN-EFYYGDMGETSRPN
        E+K  ITQ+    D D  EQ++N     G++GETS PN
Subjt:  EFKSNITQQQEEDDHDHDEQQEN-EFYYGDMGETSRPN

A0A6J1HDY6 nuclear transcription factor Y subunit B-4-like1.9e-5076.3Show/hide
Query:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK
        MG+NNGDELQLPIANVGRLMKKI+P + KISKEAK TMQECATEFISFVTSEAA+KCHK+NRRTLNGDDICWAFG+ GLDNYAEAS KYL KYR VERI 
Subjt:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK

Query:  AEFKSNITQQQEEDDHDHDEQQENEFYYGDMGETS
        A+FK+NI  +Q++ D      QE EFY+G++GETS
Subjt:  AEFKSNITQQQEEDDHDHDEQQENEFYYGDMGETS

A0A6J1HUN8 nuclear transcription factor Y subunit B-4-like1.5e-5071.33Show/hide
Query:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK
        MG+NNGDELQLPIANVGRLMKKI+P + KISKEAK TMQECATEFISFVTSEAA+KCHK+NRRTLNGDDICWAFG+ GLDNYAEAS KYL KYR +ERI 
Subjt:  MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIK

Query:  AEFKSNITQQQ--------EEDDHDHDEQQENEFYYGDMGETS
        A+FK+NI ++Q        +E + + +++QE EFY+G++GETS
Subjt:  AEFKSNITQQQ--------EEDDHDHDEQQENEFYYGDMGETS

SwissProt top hitse value%identityAlignment
O04027 Nuclear transcription factor Y subunit B-47.4e-3160.34Show/hide
Query:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKAEFK--SNIT
        LPIANVGRLMK+I+P   KISKEAKQT+QECATEFISFVT EA++KCH+ENR+T+NGDDI WA   LGLDNYA+A  ++L KYR+ ER + E    SN +
Subjt:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKAEFK--SNIT

Query:  QQQEEDDHDHDEQQEN
          ++E +   D Q ++
Subjt:  QQQEEDDHDHDEQQEN

O82248 Nuclear transcription factor Y subunit B-56.9e-2966.67Show/hide
Query:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE
        LPIANVGR+MK I+P   K+SKEAK+TMQEC +EFISFVT EA+ KCHKE R+T+NGDDICWA   LG D+YA    KYL +YR +E
Subjt:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE

P25209 Nuclear transcription factor Y subunit B2.1e-2557.47Show/hide
Query:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE
        LPIAN+ R+MKK +P  GKI+K+AK+T+QEC +EFISF+TSEA+ KC +E R+T+NGDD+ WA   LG ++Y E    YL KYR++E
Subjt:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE

Q60EQ4 Nuclear transcription factor Y subunit B-32.1e-2557.47Show/hide
Query:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE
        LPIAN+ R+MKK +P  GKI+K+AK+T+QEC +EFISF+TSEA+ KC +E R+T+NGDD+ WA   LG ++Y E    YL KYR++E
Subjt:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE

Q9SIT9 Nuclear transcription factor Y subunit B-75.5e-2649.61Show/hide
Query:  DNNGDELQ---LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERI
        +NN ++ Q   LPIANVGR+MKK++P  GKISK+AK+T+QEC +EFISFVT EA+ KC +E R+T+NGDDI WA   LG ++Y      YL KYR  E  
Subjt:  DNNGDELQ---LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERI

Query:  KAEFKSNITQQQEEDDHDHDEQQENEFYY
        K     N  +QQ++       QQ+N   Y
Subjt:  KAEFKSNITQQQEEDDHDHDEQQENEFYY

Arabidopsis top hitse value%identityAlignment
AT1G09030.1 nuclear factor Y, subunit B45.3e-3260.34Show/hide
Query:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKAEFK--SNIT
        LPIANVGRLMK+I+P   KISKEAKQT+QECATEFISFVT EA++KCH+ENR+T+NGDDI WA   LGLDNYA+A  ++L KYR+ ER + E    SN +
Subjt:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKAEFK--SNIT

Query:  QQQEEDDHDHDEQQEN
          ++E +   D Q ++
Subjt:  QQQEEDDHDHDEQQEN

AT2G13570.1 nuclear factor Y, subunit B73.9e-2749.61Show/hide
Query:  DNNGDELQ---LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERI
        +NN ++ Q   LPIANVGR+MKK++P  GKISK+AK+T+QEC +EFISFVT EA+ KC +E R+T+NGDDI WA   LG ++Y      YL KYR  E  
Subjt:  DNNGDELQ---LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERI

Query:  KAEFKSNITQQQEEDDHDHDEQQENEFYY
        K     N  +QQ++       QQ+N   Y
Subjt:  KAEFKSNITQQQEEDDHDHDEQQENEFYY

AT2G47810.1 nuclear factor Y, subunit B54.9e-3066.67Show/hide
Query:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE
        LPIANVGR+MK I+P   K+SKEAK+TMQEC +EFISFVT EA+ KCHKE R+T+NGDDICWA   LG D+YA    KYL +YR +E
Subjt:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE

AT3G53340.1 nuclear factor Y, subunit B103.3e-2656.32Show/hide
Query:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE
        LPIAN+ R+MK+ +P+ GKI+K+AK+TMQEC +EFISFVTSEA+ KC +E R+T+NGDD+ WA   LG ++Y +    YL +YR++E
Subjt:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE

AT4G14540.1 nuclear factor Y, subunit B37.3e-2658.62Show/hide
Query:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE
        LPIANV R+MKK +P   KISK+AK+T+QEC +EFISF+T EA+ KC +E R+T+NGDD+ WA   LG ++Y E    YL KYR+VE
Subjt:  LPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACAATAATGGGGATGAGCTTCAACTACCAATAGCAAACGTTGGTAGATTAATGAAGAAGATAGTTCCTATGAGGGGCAAGATTTCAAAAGAAGCCAAACAAAC
AATGCAAGAATGTGCAACTGAGTTCATCAGCTTCGTAACAAGTGAAGCAGCACAAAAATGTCATAAAGAGAATCGAAGAACACTCAATGGAGATGATATTTGTTGGGCTT
TTGGTGCACTTGGCTTAGATAACTATGCTGAGGCTTCTACCAAGTACTTATTCAAGTATAGACAAGTCGAGAGAATCAAGGCTGAGTTCAAAAGCAATATAACTCAACAA
CAAGAAGAAGATGATCATGATCATGATGAACAACAAGAAAATGAATTTTATTATGGTGACATGGGTGAAACCTCTCGACCAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGACAATAATGGGGATGAGCTTCAACTACCAATAGCAAACGTTGGTAGATTAATGAAGAAGATAGTTCCTATGAGGGGCAAGATTTCAAAAGAAGCCAAACAAAC
AATGCAAGAATGTGCAACTGAGTTCATCAGCTTCGTAACAAGTGAAGCAGCACAAAAATGTCATAAAGAGAATCGAAGAACACTCAATGGAGATGATATTTGTTGGGCTT
TTGGTGCACTTGGCTTAGATAACTATGCTGAGGCTTCTACCAAGTACTTATTCAAGTATAGACAAGTCGAGAGAATCAAGGCTGAGTTCAAAAGCAATATAACTCAACAA
CAAGAAGAAGATGATCATGATCATGATGAACAACAAGAAAATGAATTTTATTATGGTGACATGGGTGAAACCTCTCGACCAAATTAG
Protein sequenceShow/hide protein sequence
MGDNNGDELQLPIANVGRLMKKIVPMRGKISKEAKQTMQECATEFISFVTSEAAQKCHKENRRTLNGDDICWAFGALGLDNYAEASTKYLFKYRQVERIKAEFKSNITQQ
QEEDDHDHDEQQENEFYYGDMGETSRPN