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Tan0014297 (gene) of Snake gourd v1 genome

Gene IDTan0014297
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionphotosystem I subunit O
Genome locationLG05:50501012..50502556
RNA-Seq ExpressionTan0014297
SyntenyTan0014297
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR017498 - Photosystem I PsaO


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463649.1 PREDICTED: photosystem I subunit O [Cucumis melo]9.2e-6990.48Show/hide
Query:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
        MATAFATSS + GLGT+SLS+PSS+SP L SGF+KSPVAARNPL V RAS GRFTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGT
Subjt:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_022142590.1 photosystem I subunit O [Momordica charantia]5.4e-6990.54Show/hide
Query:  MATAFATSSTIVGLG-TSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG
        MATAFATSSTIVGLG +SSLS+PSS+SP LAS F+KSP AARNPL VARASGGRFTCF+RDWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLG-TSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG

Query:  TELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
         ELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  TELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_022973174.1 photosystem I subunit O [Cucurbita maxima]7.0e-6988.44Show/hide
Query:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
        MA+AFATSS++VGLG+SSLS+PSS+SP L SGF+K PV ARNP GVAR+ GGRFTCF RDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG 
Subjt:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_023520691.1 photosystem I subunit O [Cucurbita pepo subsp. pepo]1.0e-6787.76Show/hide
Query:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
        MA+AFATSS++VGLG+SSLS+PSS+SP L S F+K PV ARNP GVAR+ GGR TCF RDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
Subjt:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

XP_038895620.1 photosystem I subunit O [Benincasa hispida]1.1e-6989.8Show/hide
Query:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
        MATAFATSS++VGLGT+SLS+PSS+SP L SGF+K PV ARNP  VARASGGRFTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG 
Subjt:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

TrEMBL top hitse value%identityAlignment
A0A0A0LT61 Uncharacterized protein4.9e-6889.12Show/hide
Query:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
        MATAFATSS + GLGT+SLS+PSS+SP L SGF+K PVAARNPL VA ASGG+FTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVI GKSLTGLFFESIG 
Subjt:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A1S3CJR4 photosystem I subunit O4.4e-6990.48Show/hide
Query:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
        MATAFATSS + GLGT+SLS+PSS+SP L SGF+KSPVAARNPL V RAS GRFTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGT
Subjt:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1CLD0 photosystem I subunit O2.6e-6990.54Show/hide
Query:  MATAFATSSTIVGLG-TSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG
        MATAFATSSTIVGLG +SSLS+PSS+SP LAS F+KSP AARNPL VARASGGRFTCF+RDWLRRDLNVIGFGLIGW+APSSIPVI+GKSLTGLFFESIG
Subjt:  MATAFATSSTIVGLG-TSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG

Query:  TELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
         ELAHFPSPPALTSQFWLWL+TWHLGLFITLTFGQIGFKGRTEDYFSK
Subjt:  TELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1EID2 photosystem I subunit O1.9e-6787.07Show/hide
Query:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
        MA+AFATSS++VGLG+SSLS+PSS+SP L S F+K PV ARNP GV R+ GGR TCF RDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
Subjt:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

A0A6J1IDS7 photosystem I subunit O3.4e-6988.44Show/hide
Query:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
        MA+AFATSS++VGLG+SSLS+PSS+SP L SGF+K PV ARNP GVAR+ GGRFTCF RDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIG 
Subjt:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK

SwissProt top hitse value%identityAlignment
Q949Q5 Photosystem I subunit O2.6e-5873.79Show/hide
Query:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
        MA  FAT ST++GLG SS++T        +S FLK  ++A+NPL +A ASGGR TCF+R+WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIGT
Subjt:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF
        ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF

Arabidopsis top hitse value%identityAlignment
AT1G08380.1 photosystem I subunit O1.8e-5973.79Show/hide
Query:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT
        MA  FAT ST++GLG SS++T        +S FLK  ++A+NPL +A ASGGR TCF+R+WLRRDLNV+GFGLIGW+APSSIP I+GKSLTGLFF+SIGT
Subjt:  MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGT

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF
        ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCCTTCGCTACCTCTTCCACCATTGTCGGCCTCGGAACCTCCTCCCTCTCCACTCCTTCCTCCAAATCTCCCCTTCTCGCCTCCGGGTTCCTCAAATCGCC
GGTGGCCGCGAGGAATCCGCTCGGCGTGGCGCGTGCATCGGGCGGAAGGTTCACCTGCTTTGACAGAGACTGGCTGCGGAGAGATCTGAATGTGATCGGTTTTGGACTGA
TCGGCTGGATTGCGCCGTCGAGCATTCCGGTGATCGACGGGAAGAGCTTGACCGGACTCTTCTTTGAGAGCATTGGAACAGAGCTTGCCCATTTTCCCTCTCCTCCCGCC
CTCACTTCTCAGTTCTGGTTGTGGCTGATTACGTGGCACTTGGGTCTCTTCATTACGCTTACCTTCGGGCAAATTGGGTTCAAGGGGAGGACCGAAGACTACTTTTCAAA
GTGA
mRNA sequenceShow/hide mRNA sequence
GTGTCAAAGCTTGATTCATCAGTAATACACCCAATATCCACAGCAATCAAATCCAGATTCCTTCCTGAAATCTCCTCCACAAAAATTCCCAACAAAATCCCAATCTCTTT
CCCACCAATTTTCTCAAGAAAATCCCAACTCCCCTTCTTCCCTTCCCTTCTCCAAACGCACCAACCAAACCCTAATCCCCAACAGAATCATCTCAAAATGGCCACCGCCT
TCGCTACCTCTTCCACCATTGTCGGCCTCGGAACCTCCTCCCTCTCCACTCCTTCCTCCAAATCTCCCCTTCTCGCCTCCGGGTTCCTCAAATCGCCGGTGGCCGCGAGG
AATCCGCTCGGCGTGGCGCGTGCATCGGGCGGAAGGTTCACCTGCTTTGACAGAGACTGGCTGCGGAGAGATCTGAATGTGATCGGTTTTGGACTGATCGGCTGGATTGC
GCCGTCGAGCATTCCGGTGATCGACGGGAAGAGCTTGACCGGACTCTTCTTTGAGAGCATTGGAACAGAGCTTGCCCATTTTCCCTCTCCTCCCGCCCTCACTTCTCAGT
TCTGGTTGTGGCTGATTACGTGGCACTTGGGTCTCTTCATTACGCTTACCTTCGGGCAAATTGGGTTCAAGGGGAGGACCGAAGACTACTTTTCAAAGTGAAAATGTAAT
CATTCTTAAAAAAATGGAAATGGAATTCCACTTTTTGTTCTTCATGTTTATAATTTATAAGTAGTGTTTGTGGCCCTGGTTTTACTTTTTGTTCATGTAAATCGTTTCAA
CCTCCAAGTCTTGTTCCAATATGTTAATCGAACAAAGTTAACCTTCACTAA
Protein sequenceShow/hide protein sequence
MATAFATSSTIVGLGTSSLSTPSSKSPLLASGFLKSPVAARNPLGVARASGGRFTCFDRDWLRRDLNVIGFGLIGWIAPSSIPVIDGKSLTGLFFESIGTELAHFPSPPA
LTSQFWLWLITWHLGLFITLTFGQIGFKGRTEDYFSK