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Tan0014304 (gene) of Snake gourd v1 genome

Gene IDTan0014304
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 9
Genome locationLG01:9316809..9317255
RNA-Seq ExpressionTan0014304
SyntenyTan0014304
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650705.1 hypothetical protein Csa_010421 [Cucumis sativus]2.9e-1452.87Show/hide
Query:  MAIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDG
        M + K   L FIGIL V  DM++I NA  +I Y  +  GD+SPGC+  HPELC+    NPYQRGC+ IDRCR+G+D  D+EE+ I+G
Subjt:  MAIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDG

XP_022136918.1 uncharacterized protein LOC111008495 [Momordica charantia]5.7e-1848.37Show/hide
Query:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEK-------PIDGKENDITNG---
        KG ML FIGIL V   M+ I NA  YI+Y  LK D+SPGC+ KHP LCK  E N YQRGCSAI+RCR   D  DSEEK        ID  E+D   G   
Subjt:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEK-------PIDGKENDITNG---

Query:  EQDIIKEDEEK-------DIIDREIEKIYKDDARNDVKDSEENIVKDNTHKIN
          DI  +D+EK       D I+ + EK  K  A +D+KDSEE I ++N  K++
Subjt:  EQDIIKEDEEK-------DIIDREIEKIYKDDARNDVKDSEENIVKDNTHKIN

XP_022159360.1 uncharacterized protein LOC111025777 [Momordica charantia]5.3e-2451.47Show/hide
Query:  MAIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDG-KENDITNGEQDII
        MAI KG M  F+GIL  C+ M+ I NA  +I YDPL+GD+SPGC+  HPELCK    NPY+RGC++IDRCR GSD  D  E  ++G  EN I + +  I+
Subjt:  MAIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDG-KENDITNGEQDII

Query:  KEDEEKDIIDREIEKIYKDDARNDVKDSEENIVKDN
        K D + D+I    EKI K DA N+VKDS+E I++ +
Subjt:  KEDEEKDIIDREIEKIYKDDARNDVKDSEENIVKDN

XP_022942029.1 auxin-induced in root cultures protein 12-like [Cucurbita moschata]7.7e-1540.94Show/hide
Query:  MAIIKGCMLSFIGILFVCIDMLVI--INANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDGKENDITNGEQDII
        MAI    ML   G LF+CIDM+ I   NAN I Y+ ++ D+SPGCN KHP LC+  + NPY+RGC+AI++CR       +  + ID K NDI        
Subjt:  MAIIKGCMLSFIGILFVCIDMLVI--INANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDGKENDITNGEQDII

Query:  KEDEEKDIIDREIEKIYKDDARNDVKDSEENIVKDNTHKINPNVTKDIS
         E E K   D  + K+              + VKDNT KINP   ++IS
Subjt:  KEDEEKDIIDREIEKIYKDDARNDVKDSEENIVKDNTHKINPNVTKDIS

XP_022961577.1 protein RALF-like 9 [Cucurbita moschata]2.5e-1347.71Show/hide
Query:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDGKEND--ITNGEQDIIKED
        KG M+ FI +LFV I+M+ I NA +YI+YDPLK +    C+  HP+LCK    NPYQRGC+ IDRCR              G E+D  I N E+DI   D
Subjt:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDGKEND--ITNGEQDIIKED

Query:  EEKDIIDRE
        EE DI+D +
Subjt:  EEKDIIDRE

TrEMBL top hitse value%identityAlignment
A0A0A0L8B1 Uncharacterized protein1.4e-1452.87Show/hide
Query:  MAIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDG
        M + K   L FIGIL V  DM++I NA  +I Y  +  GD+SPGC+  HPELC+    NPYQRGC+ IDRCR+G+D  D+EE+ I+G
Subjt:  MAIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDG

A0A6J1C8U5 uncharacterized protein LOC1110084952.7e-1848.37Show/hide
Query:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEK-------PIDGKENDITNG---
        KG ML FIGIL V   M+ I NA  YI+Y  LK D+SPGC+ KHP LCK  E N YQRGCSAI+RCR   D  DSEEK        ID  E+D   G   
Subjt:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEK-------PIDGKENDITNG---

Query:  EQDIIKEDEEK-------DIIDREIEKIYKDDARNDVKDSEENIVKDNTHKIN
          DI  +D+EK       D I+ + EK  K  A +D+KDSEE I ++N  K++
Subjt:  EQDIIKEDEEK-------DIIDREIEKIYKDDARNDVKDSEENIVKDNTHKIN

A0A6J1DYH7 uncharacterized protein LOC1110257772.6e-2451.47Show/hide
Query:  MAIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDG-KENDITNGEQDII
        MAI KG M  F+GIL  C+ M+ I NA  +I YDPL+GD+SPGC+  HPELCK    NPY+RGC++IDRCR GSD  D  E  ++G  EN I + +  I+
Subjt:  MAIIKGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDG-KENDITNGEQDII

Query:  KEDEEKDIIDREIEKIYKDDARNDVKDSEENIVKDN
        K D + D+I    EKI K DA N+VKDS+E I++ +
Subjt:  KEDEEKDIIDREIEKIYKDDARNDVKDSEENIVKDN

A0A6J1FQ53 auxin-induced in root cultures protein 12-like3.7e-1540.94Show/hide
Query:  MAIIKGCMLSFIGILFVCIDMLVI--INANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDGKENDITNGEQDII
        MAI    ML   G LF+CIDM+ I   NAN I Y+ ++ D+SPGCN KHP LC+  + NPY+RGC+AI++CR       +  + ID K NDI        
Subjt:  MAIIKGCMLSFIGILFVCIDMLVI--INANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDGKENDITNGEQDII

Query:  KEDEEKDIIDREIEKIYKDDARNDVKDSEENIVKDNTHKINPNVTKDIS
         E E K   D  + K+              + VKDNT KINP   ++IS
Subjt:  KEDEEKDIIDREIEKIYKDDARNDVKDSEENIVKDNTHKINPNVTKDIS

A0A6J1HAJ8 protein RALF-like 91.2e-1347.71Show/hide
Query:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDGKEND--ITNGEQDIIKED
        KG M+ FI +LFV I+M+ I NA +YI+YDPLK +    C+  HP+LCK    NPYQRGC+ IDRCR              G E+D  I N E+DI   D
Subjt:  KGCMLSFIGILFVCIDMLVIINA-NYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDGKEND--ITNGEQDIIKED

Query:  EEKDIIDRE
        EE DI+D +
Subjt:  EEKDIIDRE

SwissProt top hitse value%identityAlignment
A8MQM2 Protein RALF-like 61.7e-0433.33Show/hide
Query:  SFIGILFVCIDMLVII------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDS
        S I I FV + +++ +         YI+Y+ +KGDI PGC++K+P+ C +     Y RGC    RC+    ++ S
Subjt:  SFIGILFVCIDMLVII------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDS

A8MQM7 Protein RALF-like 153.4e-0539.06Show/hide
Query:  MLSFIGILFVCIDMLVIINANYISYDPLK-GDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR
        ++S   ILF+ +    +    YISY  +  GD +  C+  HP  CK+   NPY+RGC  I+RCR
Subjt:  MLSFIGILFVCIDMLVIINANYISYDPLK-GDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR

A8MRM1 Protein RALF-like 166.3e-0434.48Show/hide
Query:  ILFVCIDMLVII-------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC-RDGSDATDSEEKPIDGKENDITN
        I+F+   M++++        A  + Y  +KGD  P C  K+P  C +  VN Y RGC  I RC RD +  T+S    +D  E+ I N
Subjt:  ILFVCIDMLVII-------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC-RDGSDATDSEEKPIDGKENDITN

Q3ECL0 Protein RALF-like 98.0e-0739.39Show/hide
Query:  MLSFIGILFVCIDMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDG
        +LS   ++F+ +    +    YI+Y  + +GD +  C+  HP  CK+ E NPYQRGC  I+RCR G
Subjt:  MLSFIGILFVCIDMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDG

Arabidopsis top hitse value%identityAlignment
AT1G60625.1 RALF-like 61.2e-0533.33Show/hide
Query:  SFIGILFVCIDMLVII------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDS
        S I I FV + +++ +         YI+Y+ +KGDI PGC++K+P+ C +     Y RGC    RC+    ++ S
Subjt:  SFIGILFVCIDMLVII------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDS

AT1G61563.1 ralf-like 81.7e-0432.81Show/hide
Query:  MLSFIGILFVCI-DMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC
        +LS   ++F+ +    V  +  YI+Y  + +GD +  C+  HP  CK+ + NPY+RGC  ++ C
Subjt:  MLSFIGILFVCI-DMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC

AT1G61566.1 ralf-like 95.7e-0839.39Show/hide
Query:  MLSFIGILFVCIDMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDG
        +LS   ++F+ +    +    YI+Y  + +GD +  C+  HP  CK+ E NPYQRGC  I+RCR G
Subjt:  MLSFIGILFVCIDMLVIINANYISYDPL-KGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDG

AT2G22055.1 RALF-like 152.4e-0639.06Show/hide
Query:  MLSFIGILFVCIDMLVIINANYISYDPLK-GDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR
        ++S   ILF+ +    +    YISY  +  GD +  C+  HP  CK+   NPY+RGC  I+RCR
Subjt:  MLSFIGILFVCIDMLVIINANYISYDPLK-GDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCR

AT2G32835.1 RALF-like 164.5e-0534.48Show/hide
Query:  ILFVCIDMLVII-------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC-RDGSDATDSEEKPIDGKENDITN
        I+F+   M++++        A  + Y  +KGD  P C  K+P  C +  VN Y RGC  I RC RD +  T+S    +D  E+ I N
Subjt:  ILFVCIDMLVII-------NANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRC-RDGSDATDSEEKPIDGKENDITN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCATCAAAGGATGCATGCTCAGTTTTATTGGCATTCTCTTTGTTTGTATTGATATGCTTGTGATTATAAATGCAAATTATATCAGTTATGATCCTCTAAAAGG
TGATATTAGCCCTGGATGTAATGCTAAACATCCTGAACTTTGTAAGAGACCTGAAGTCAACCCATATCAAAGAGGTTGTAGTGCAATCGATCGTTGCAGAGATGGATCTG
ATGCCACAGATAGTGAAGAAAAACCAATTGATGGGAAAGAAAATGACATCACAAATGGTGAACAAGATATTATTAAAGAAGATGAAGAAAAAGATATCATAGATCGTGAA
ATAGAAAAGATTTATAAAGACGATGCACGAAATGACGTCAAGGATAGTGAAGAAAATATTGTTAAAGACAATACGCACAAGATCAACCCAAATGTCACAAAAGATATTTC
TCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCATCAAAGGATGCATGCTCAGTTTTATTGGCATTCTCTTTGTTTGTATTGATATGCTTGTGATTATAAATGCAAATTATATCAGTTATGATCCTCTAAAAGG
TGATATTAGCCCTGGATGTAATGCTAAACATCCTGAACTTTGTAAGAGACCTGAAGTCAACCCATATCAAAGAGGTTGTAGTGCAATCGATCGTTGCAGAGATGGATCTG
ATGCCACAGATAGTGAAGAAAAACCAATTGATGGGAAAGAAAATGACATCACAAATGGTGAACAAGATATTATTAAAGAAGATGAAGAAAAAGATATCATAGATCGTGAA
ATAGAAAAGATTTATAAAGACGATGCACGAAATGACGTCAAGGATAGTGAAGAAAATATTGTTAAAGACAATACGCACAAGATCAACCCAAATGTCACAAAAGATATTTC
TCATTGA
Protein sequenceShow/hide protein sequence
MAIIKGCMLSFIGILFVCIDMLVIINANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDGKENDITNGEQDIIKEDEEKDIIDRE
IEKIYKDDARNDVKDSEENIVKDNTHKINPNVTKDISH