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Tan0014392 (gene) of Snake gourd v1 genome

Gene IDTan0014392
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationLG01:86019309..86021067
RNA-Seq ExpressionTan0014392
SyntenyTan0014392
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463015.1 PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo]8.5e-3493.51Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR   DPAKAPPKKWLCCIQSP AES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
XP_022139562.1 RPM1-interacting protein 4 [Momordica charantia]1.1e-3697.4Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GRPGADP+KAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
XP_022936748.1 uncharacterized protein LOC111443250 [Cucurbita moschata]1.4e-3698.7Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR GADPAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
XP_022941007.1 RPM1-interacting protein 4-like [Cucurbita moschata]2.4e-3697.4Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
        M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGA+PAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
XP_038897827.1 protein NOI4 [Benincasa hispida]3.1e-3697.4Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GRP ADPAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
TrEMBL top hitse value%identityAlignment
A0A6J1CEA3 RPM1-interacting protein 45.2e-3797.4Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA+GRPGADP+KAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
A0A6J1FE40 uncharacterized protein LOC1114432506.8e-3798.7Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR GADPAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
A0A6J1FL74 RPM1-interacting protein 4-like1.2e-3697.4Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
        M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGA+PAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
A0A6J1ID15 uncharacterized protein LOC111474733 isoform X26.8e-3798.7Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR GADPAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
A0A6J1J2H2 RPM1-interacting protein 4-like1.2e-3697.4Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
        M DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGA+PAKAPPKKWLCCIQSPPAES
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES
SwissProt top hitse value%identityAlignment
O22633 Protein NOI43.6e-2773.75Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---PGADPAKAPPKKWLCCIQSPPAES
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  PKKWLCC+Q+P  +S
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---PGADPAKAPPKKWLCCIQSPPAES
Q8GYN5 RPM1-interacting protein 43.0e-0535.82Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCC
        +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G       +      P    ++ P     CC
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCC
Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.1e-2368.06Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQS
        M DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK +       +  + P KKW CCI++
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQS
AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein3.6e-1459.38Show/hide
Query:  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCC
        RPLPKFGEWDVNDP SAEGFTVIF KARD+KKT    ++ G+  +Q R        P KK  CC
Subjt:  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCC
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein6.1e-2268Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---PGADPAKAPPKKWLCCIQS
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  P K +  + +
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---PGADPAKAPPKKWLCCIQS
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein4.0e-2168.49Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---PGADPAKAPPKKWLCCIQS
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  P K +  + +
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---PGADPAKAPPKKWLCCIQS
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein1.7e-2774.36Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---PGADPAKAPPKKWLCCIQSPPAES
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  ++G     G DP+K  PKKWLCC+Q+P  +S
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGR---PGADPAKAPPKKWLCCIQSPPAES

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCTGCTGAGGGATTCACTGTGATTTTTAACAAAGCTAGAGATGAGAAGAA
AACAGGCGGCAAACCTGATTCACCTGGAAAAGTAGATGCACAGGGCAGGCCTGGAGCAGATCCTGCCAAGGCACCGCCTAAGAAATGGCTTTGCTGTATCCAAAGTCCCC
CTGCTGAGTCTTGA
mRNA sequenceShow/hide mRNA sequence
CCGTATCCAATAAGCCCACTTTTGGCCCAATTTACAAAAGTCGCCTCTTCTCTCTTTCTCAACCCGTCTCTGTTATTTTCTCTCTTTGATTGCTTTCAAATTCATTTCTT
TTTCCTCAGAATCGTTCTGATTTCTCTCTCTAGAATTCATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCTGCTGAGGGA
TTCACTGTGATTTTTAACAAAGCTAGAGATGAGAAGAAAACAGGCGGCAAACCTGATTCACCTGGAAAAGTAGATGCACAGGGCAGGCCTGGAGCAGATCCTGCCAAGGC
ACCGCCTAAGAAATGGCTTTGCTGTATCCAAAGTCCCCCTGCTGAGTCTTGACTCTTGAGAAGGTTCGTTAAGAAGCCTCAGTTGCAAAACATATTATTCTGTAATTGTG
TCTGCTGTGGCCTCTCAAATACGATGAACTTTCATGGAGCCTTGATGATCCTGCTAAATTTTATGCAATTTCATGTAAATCTGAGTGTTGTTGTTGTGGAGGAAAAAGTA
AAGAAGACGAACATGTATTGTATTTATATTATTGATATGGTGGTTTTTTATTAGAGGATAAAGTTGCTATTCTGTCTTTGCCTTTGGTGTGAGCTGTAAAGCTTTGCACT
GGACATCATGTATAATTGTGGCTGGTATAATTAATGTAATACAACTTTTGCTTTTCTCTCAA
Protein sequenceShow/hide protein sequence
MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAQGRPGADPAKAPPKKWLCCIQSPPAES