; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0014468 (gene) of Snake gourd v1 genome

Gene IDTan0014468
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:68313561..68314728
RNA-Seq ExpressionTan0014468
SyntenyTan0014468
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7821943.1 RVT_3 domain-containing protein [Senna tora]3.2e-0625.91Show/hide
Query:  VCTLLRDYGFWDEDKVQEHFNQDDAEYILSIPRTGELTTDEIVWKCTMKGVFSVKNQG-------RLDW-ERVFLNTQLQFQEFTQSEATRIQVP----D
        VC L+   G W+ + +   F    A  ILSIP       D   W  T  G ++VK++         L W  R  +   +   E       ++ V      
Subjt:  VCTLLRDYGFWDEDKVQEHFNQDDAEYILSIPRTGELTTDEIVWKCTMKGVFSVKNQG-------RLDW-ERVFLNTQLQFQEFTQSEATRIQVP----D

Query:  HMTTTTEVWESSDEGRIVRAGHHHIIDRWSITILELCDILKGMDFIQEYNIPLL-VEYDSWEVIQLINSVDNDQTEARDFARKIRQRTNSWPTISFRHTR
         + T       + +GR++ A         S+ +LE   +L GM+F ++     + +E D+  V  L+N               I    + + +ISFR   
Subjt:  HMTTTTEVWESSDEGRIVRAGHHHIIDRWSITILELCDILKGMDFIQEYNIPLL-VEYDSWEVIQLINSVDNDQTEARDFARKIRQRTNSWPTISFRHTR

Query:  QETNMVAHKLAQRGKHLQGE
        + TNMVAHKLA+ G  L GE
Subjt:  QETNMVAHKLAQRGKHLQGE
TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134125.6e-0436.79Show/hide
Query:  WESSDE-GRIVRAGHHHIIDRWSITILELCDILKGMDFI-QEYNIPLLVEYDSWEVIQLINSVDNDQTEARDFARKIRQRTNSWPTISFRHTRQETNMVA
        W   DE G +++A    I    +IT LE+  I +G+  I QE+  P+ +E DS E I L++    DQTE      +I Q       +S RH  +E N VA
Subjt:  WESSDE-GRIVRAGHHHIIDRWSITILELCDILKGMDFI-QEYNIPLLVEYDSWEVIQLINSVDNDQTEARDFARKIRQRTNSWPTISFRHTRQETNMVA

Query:  HKLAQR
        H LA+R
Subjt:  HKLAQR
A0A803QE56 Uncharacterized protein7.3e-0444.07Show/hide
Query:  GQNVCTLLRDYGFWDEDKVQEHFNQDDAEYILSIPRTGELTTDEIVWKCTMKGVFSVKN
        G  V  L R  G WDE+ V+  FN++DA+ IL +P TG    D+I+W  T  G +SVK+
Subjt:  GQNVCTLLRDYGFWDEDKVQEHFNQDDAEYILSIPRTGELTTDEIVWKCTMKGVFSVKN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGGCCAGAATGTGTGCACTTTGCTTCGTGATTATGGTTTTTGGGACGAAGATAAGGTACAGGAGCACTTTAACCAGGACGATGCAGAATACATTCTCTCAATCCC
GCGAACTGGAGAACTGACCACTGACGAAATTGTTTGGAAGTGCACCATGAAAGGGGTCTTTTCAGTTAAGAACCAGGGCAGACTTGACTGGGAAAGGGTGTTCCTCAACA
CACAACTCCAGTTTCAGGAGTTCACTCAATCAGAGGCTACAAGGATCCAAGTTCCAGATCATATGACAACGACGACAGAAGTTTGGGAGTCGTCGGATGAAGGAAGGATA
GTGCGCGCAGGGCATCACCACATCATAGACAGGTGGTCAATCACCATTTTGGAACTTTGTGATATTCTCAAGGGTATGGACTTCATTCAGGAGTATAACATACCTCTCTT
GGTGGAATATGATTCTTGGGAGGTTATACAACTTATTAATAGTGTTGACAATGATCAAACGGAGGCAAGAGACTTTGCGAGGAAGATCAGACAACGGACAAATTCTTGGC
CCACTATTTCTTTTCGCCACACTAGACAGGAGACAAATATGGTCGCCCACAAGCTGGCGCAACGTGGAAAACACCTACAGGGAGAAGAACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAGGCCAGAATGTGTGCACTTTGCTTCGTGATTATGGTTTTTGGGACGAAGATAAGGTACAGGAGCACTTTAACCAGGACGATGCAGAATACATTCTCTCAATCCC
GCGAACTGGAGAACTGACCACTGACGAAATTGTTTGGAAGTGCACCATGAAAGGGGTCTTTTCAGTTAAGAACCAGGGCAGACTTGACTGGGAAAGGGTGTTCCTCAACA
CACAACTCCAGTTTCAGGAGTTCACTCAATCAGAGGCTACAAGGATCCAAGTTCCAGATCATATGACAACGACGACAGAAGTTTGGGAGTCGTCGGATGAAGGAAGGATA
GTGCGCGCAGGGCATCACCACATCATAGACAGGTGGTCAATCACCATTTTGGAACTTTGTGATATTCTCAAGGGTATGGACTTCATTCAGGAGTATAACATACCTCTCTT
GGTGGAATATGATTCTTGGGAGGTTATACAACTTATTAATAGTGTTGACAATGATCAAACGGAGGCAAGAGACTTTGCGAGGAAGATCAGACAACGGACAAATTCTTGGC
CCACTATTTCTTTTCGCCACACTAGACAGGAGACAAATATGGTCGCCCACAAGCTGGCGCAACGTGGAAAACACCTACAGGGAGAAGAACATTAG
Protein sequenceShow/hide protein sequence
MTGQNVCTLLRDYGFWDEDKVQEHFNQDDAEYILSIPRTGELTTDEIVWKCTMKGVFSVKNQGRLDWERVFLNTQLQFQEFTQSEATRIQVPDHMTTTTEVWESSDEGRI
VRAGHHHIIDRWSITILELCDILKGMDFIQEYNIPLLVEYDSWEVIQLINSVDNDQTEARDFARKIRQRTNSWPTISFRHTRQETNMVAHKLAQRGKHLQGEEH