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Tan0014475 (gene) of Snake gourd v1 genome

Gene IDTan0014475
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalmodulin
Genome locationLG02:84620241..84620656
RNA-Seq ExpressionTan0014475
SyntenyTan0014475
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585661.1 putative calcium-binding protein CML15, partial [Cucurbita argyrosperma subsp. sororia]3.6e-3173.91Show/hide
Query:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTLC
        MGNSKS TY+R LVP +EEQL DIFKSHD+DGDGKL+KEELK AF++LGS FS+FRA+EALRT D + DG +SMDEM KLI+Y KGRKYT+C
Subjt:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTLC

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3381.52Show/hide
Query:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTLC
        MGNSKS TY+R LVP TEEQLA IFKSHD+DGDGKLTKEELK AFN+LGS FSSFRA EALR ADADGDGTI+M EM KLI+Y K RKYTLC
Subjt:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTLC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]9.6e-3277.17Show/hide
Query:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTLC
        MGNSKS TY+R LVPF+EEQLA +FK+HD DGDGKLTKEELK AF++LGS FSSFR +EALR AD DGDG ISM EM KLI+YAK RKYTLC
Subjt:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTLC

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-3480.43Show/hide
Query:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTLC
        MGN+KST Y+R LVPFTEEQLA IFKSHD+DGDGKL+KEELK AFN+LGS FSSFR KEALR AD +GDG ISMDEM KLI+Y KGRKYTLC
Subjt:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTLC

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-3277.17Show/hide
Query:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTLC
        MGNSKS TY+R LVPF+EEQLA +FK+HD DGDGKLTKEELK AF++LGS FSSFR +EALR AD DGDG ISM EM KLI+YAK RKYTLC
Subjt:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTLC

TrEMBL top hitse value%identityAlignment
A0A0A0LRB6 Uncharacterized protein9.6e-3072.53Show/hide
Query:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTL
        MGNSKS TY+R LVPF+EEQLA++FK+HD+DGDG LTKEELK AF +LGS F +FR +EALR AD +GDG ISMDEM KLI+YAK RKYT+
Subjt:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTL

A0A2N9FYQ0 Uncharacterized protein1.3e-1852.87Show/hide
Query:  KSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTL
        K  +++R  +PFTEEQL +IFKSHD DGDGKL+++E+K AF +LGS + ++RA +A+  ADAD DG I  +E+KKL++YA    YT+
Subjt:  KSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.9e-3073.63Show/hide
Query:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTL
        MGNSKS TY+R LVPF+EEQLA++FK+HD+DGDG LTKEELK AF +LGS FS+FR +EALR AD +GDG ISMDEM KLI+YAK RKYT+
Subjt:  MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTL

A0A5A7VBH2 Calcium-binding EF-hand3.2e-1753.01Show/hide
Query:  YRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTL
        Y+R  VPF+ +QL DIF  HD DGDG+L++ ELK AF+ LGS +S FRA+++L+ ADADGDG +++DE+  L++YA  R+Y +
Subjt:  YRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTL

A0A7N2KRS3 Uncharacterized protein5.9e-1955.17Show/hide
Query:  KSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTL
        K+  ++R  VPF E+QL +IFKSHD DGDGKL+++ELK+AF +LGS + ++R  +ALR ADA+ DG I+ DE+KKL+EYA    YT+
Subjt:  KSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTL

SwissProt top hitse value%identityAlignment
O96102 Calmodulin1.3e-0740Show/hide
Query:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI
        TEE++ + FK  D+DG+G ++  EL+H    LG   S     E +R AD DGDG ++ DE  K++
Subjt:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI

P02599 Calmodulin1.7e-0738.46Show/hide
Query:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI
        TEE++ + FK  D+DG+G ++  EL+H    LG   ++    E +R AD DGDG ++ DE  K++
Subjt:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI

P05933 Calmodulin2.2e-0740.62Show/hide
Query:  EEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI
        EE++ + FK  D+DG+G +T EEL H    LG   S     + +R AD DGDG I+ +E  ++I
Subjt:  EEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI

P24044 Calmodulin7.7e-0840Show/hide
Query:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI
        TEE+L + F+  D+DGDG ++ +EL+H    LG   ++    E +R AD DGDG I+ +E  K++
Subjt:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI

P62203 Calmodulin7.7e-0840Show/hide
Query:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI
        TEE+L + F+  D+DGDG ++ +EL+H    LG   ++    E +R AD DGDG I+ +E  K++
Subjt:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI

Arabidopsis top hitse value%identityAlignment
AT1G32250.1 Calcium-binding EF-hand family protein2.1e-0840Show/hide
Query:  PFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYA
        P+TEEQL  +F+  D DG+G +T  EL H+   LG   +       ++ AD+DGDG I+  E  K I  A
Subjt:  PFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYA

AT1G66410.1 calmodulin 48.7e-0735.38Show/hide
Query:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI
        +EE+L + F+  D+D +G ++  EL+H    LG   +    +E +R AD DGDG I+ +E  K++
Subjt:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI

AT3G03000.1 EF hand calcium-binding protein family1.3e-0737.14Show/hide
Query:  PFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYA
        P+T++QL  IF+  D+DG+G +T  EL H+   LG   ++      ++ AD DGDG I   E  + I  A
Subjt:  PFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYA

AT3G50770.1 calmodulin-like 412.3e-0735.38Show/hide
Query:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI
        ++E+L  +F   D DGDGK++  EL+H F  +G   S   A+EA+   D D DG++  ++   L+
Subjt:  TEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLI

AT5G42380.1 calmodulin like 376.0e-0838.81Show/hide
Query:  QLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKG
        +L  +F   D + DGK++ EEL+   + LG   SS   +E ++T+D DGDG I  +E  KL+E   G
Subjt:  QLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTCCAAAAGTACAACTTACAGACGAGCTTTGGTTCCATTCACAGAGGAGCAACTGGCCGACATTTTCAAGAGCCACGACCAAGACGGTGACGGCAAGCTGAC
AAAGGAGGAGTTGAAGCACGCCTTCAACTTTCTTGGCTCATGTTTCAGCTCCTTCAGAGCCAAAGAAGCTCTACGCACCGCCGATGCTGATGGCGATGGCACCATCAGCA
TGGACGAGATGAAGAAGCTAATTGAATATGCCAAAGGTCGTAAATACACTCTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
CTTTCCCTCTATATAAAAGGCAGCACAACTATACGGATTCTGTCAAGTTCAACCCATACAAAAATCTTATTCCCTTTCTTCTTCTTCTTCTTCGATGGGGAATTCCAAAA
GTACAACTTACAGACGAGCTTTGGTTCCATTCACAGAGGAGCAACTGGCCGACATTTTCAAGAGCCACGACCAAGACGGTGACGGCAAGCTGACAAAGGAGGAGTTGAAG
CACGCCTTCAACTTTCTTGGCTCATGTTTCAGCTCCTTCAGAGCCAAAGAAGCTCTACGCACCGCCGATGCTGATGGCGATGGCACCATCAGCATGGACGAGATGAAGAA
GCTAATTGAATATGCCAAAGGTCGTAAATACACTCTTTGTTAAAATTACGTATATATGTTTAATTTGTTGTCTTTTACTAACTGTG
Protein sequenceShow/hide protein sequence
MGNSKSTTYRRALVPFTEEQLADIFKSHDQDGDGKLTKEELKHAFNFLGSCFSSFRAKEALRTADADGDGTISMDEMKKLIEYAKGRKYTLC