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Tan0014546 (gene) of Snake gourd v1 genome

Gene IDTan0014546
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial
Genome locationLG02:8113626..8115197
RNA-Seq ExpressionTan0014546
SyntenyTan0014546
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022286.1 hypothetical protein SDJN02_16017, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-3083.7Show/hide
Query:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGF
        MASVCRS+LTA GS+ MAGRTRTL+ KTLNPMP SSSS+GL SV     SRIVSSLATVESLMPLHSAVASARLKSKI+VDSHCWSWLSEGF
Subjt:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGF

XP_022136047.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Momordica charantia]1.2e-3285.57Show/hide
Query:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPV-SSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        MA+VCRS+LTAAGS+S+AGRTRTL  KTLNPMPV SSSSRG+PSV     SRIVSSLATVESLMPLHSAVASARLKSKI+VDSHCWSWLSEGFATPL
Subjt:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPV-SSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

XP_022933658.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Cucurbita moschata]7.6e-3283.33Show/hide
Query:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        MASVCRS+LTA G++ + GRTRTLV KTLNPMP SSSSRGL SV     SRIVSSLATVESLMPLHSAVASARLKSKI+VDSHCWSWLSEGFATPL
Subjt:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

XP_023531748.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]4.0e-3385.42Show/hide
Query:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        MASVCRS+LTA GS+SMAGRTRTL+ KTLNPMP SSSS+GL SV     SRIVSSLATVESLMPLHSAVASARLKSKI+VDSHCWSWLSEGFATPL
Subjt:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

XP_038887804.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial [Benincasa hispida]1.0e-3183.33Show/hide
Query:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        MASVCRS+LTAA S+SMAGRTRTL HKTLNP+ VSSSSRG  SV     SRIVSSLATVESLMPLHSAVASARLKSKI+VDSHCW WLSEGF TPL
Subjt:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

TrEMBL top hitse value%identityAlignment
A0A0A0K7P3 Uncharacterized protein1.9e-2877.32Show/hide
Query:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPV-SSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        MASV RS+LTAA S+SM GRT++L HKTLNP+PV SSSSR  PS     F+RIVSSLA VESLMPLH+AVASARLKSKI+VDSHCWSWLSEGFAT L
Subjt:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPV-SSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

A0A6J1C4G8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial5.7e-3385.57Show/hide
Query:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPV-SSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        MA+VCRS+LTAAGS+S+AGRTRTL  KTLNPMPV SSSSRG+PSV     SRIVSSLATVESLMPLHSAVASARLKSKI+VDSHCWSWLSEGFATPL
Subjt:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPV-SSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

A0A6J1F5F6 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like3.7e-3283.33Show/hide
Query:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        MASVCRS+LTA G++ + GRTRTLV KTLNPMP SSSSRGL SV     SRIVSSLATVESLMPLHSAVASARLKSKI+VDSHCWSWLSEGFATPL
Subjt:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

A0A6J1GKU0 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like1.7e-2977.78Show/hide
Query:  MASVCRSILTAA---GSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        MAS+CRS+L AA   GS+SMAGRTRTL H TL P+PVSSSSRG  SV     SRI SSLA+V+SLMPLHSAVASARLKSKI+VDSHCWSWLSEGFATPL
Subjt:  MASVCRSILTAA---GSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

A0A6J1I675 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial3.8e-2978.57Show/hide
Query:  MASVCRSILTAA--GSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        MASVCRS+L AA  GS+SMAGRTRTL H TL P+PVSSSSRG  SV     SRI  SLA+V+SLMPLHSAVASARLKSKI+VDSHCWSWLSEGFATPL
Subjt:  MASVCRSILTAA--GSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein1.2e-0638.16Show/hide
Query:  TRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        ++T VH +  P P+ SSS    +   +   R+   L+   S++PLHSA+ASARL S +SV+S  W  + +G + PL
Subjt:  TRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

AT1G70350.1 unknown protein2.0e-0649.18Show/hide
Query:  SSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        SSS   PS+    FSR+   L+   SL+PLHS  ASA L S +S+ +  WS LSEGFA+ L
Subjt:  SSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

AT4G17310.1 unknown protein2.2e-0539.78Show/hide
Query:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSF--FSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEG
        MAS CR +   A   S+    R+    T      SS+   LPS  +    FSR  S L  V+SL+PLHS VA+ARL S +S  S     LS+G
Subjt:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSF--FSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEG

AT4G39300.1 unknown protein2.3e-1854.08Show/hide
Query:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSF--FSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL
        MAS CRS L  AGS+++  R+RT+  K+LN  P ++SS    S+S S    SR++S+L +VE+++PLHSAVASARL+S I+ DS CWS LS+G ATPL
Subjt:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSF--FSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL

AT4G39300.2 unknown protein8.2e-1650.52Show/hide
Query:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSF--FSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATP
        MAS CRS L  AGS+++  R+RT+  K+LN  P ++SS    S+S S    SR++S+L +VE+++PLHSAVASARL+S I+ DS CWS LS+    P
Subjt:  MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSF--FSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTTTGCCGATCAATTCTCACGGCGGCGGGTTCGAAGTCCATGGCCGGCCGGACCAGAACACTGGTTCATAAAACCCTAAATCCAATGCCTGTTTCTTCTTC
CTCCAGAGGCCTCCCTTCCGTTTCCAGTTCGTTTTTCTCTAGGATCGTTTCGTCTTTGGCTACTGTGGAGTCGCTGATGCCACTCCACAGCGCCGTCGCCTCAGCTCGGT
TGAAGTCCAAAATTTCCGTCGACTCGCATTGCTGGAGCTGGCTTTCTGAAGGATTTGCAACACCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
TATATATAGTTCCCAAGGCGGTGCGTTGAGCAAAACCTGCGTTCCGCCTCCTCTCGAACCAGAAATGGCTTCCGTTTGCCGATCAATTCTCACGGCGGCGGGTTCGAAGT
CCATGGCCGGCCGGACCAGAACACTGGTTCATAAAACCCTAAATCCAATGCCTGTTTCTTCTTCCTCCAGAGGCCTCCCTTCCGTTTCCAGTTCGTTTTTCTCTAGGATC
GTTTCGTCTTTGGCTACTGTGGAGTCGCTGATGCCACTCCACAGCGCCGTCGCCTCAGCTCGGTTGAAGTCCAAAATTTCCGTCGACTCGCATTGCTGGAGCTGGCTTTC
TGAAGGATTTGCAACACCTTTGTGACACAAAGACGAATTTGAATCGACCATACAGCCCAATGACTGGTAGCTGAGAGGACACATTGTAAGACTTGCGAGGATTTTTCATC
TTTCCTACTAATCTTTGTAAGATACCTTTATCACAAGGAAGAATCATTTAGACAACTGCTTTTGAGTTTTGATAATTATATAATGCAATGCGGCCCCTTTTTCTGGATAT
GCCGAGAGTTATTGTTTTGAGCCTCTGACCACAAATCTTGAGAGATTGCATTGTTATCAGGATCTCTCTGTTG
Protein sequenceShow/hide protein sequence
MASVCRSILTAAGSKSMAGRTRTLVHKTLNPMPVSSSSRGLPSVSSSFFSRIVSSLATVESLMPLHSAVASARLKSKISVDSHCWSWLSEGFATPL