CuGenDBv2

Gene ID	Tan0014568
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein GIGANTEA-like isoform X1
Genome location	LG01:78417198..78426374
RNA-Seq Expression	Tan0014568
Synteny	Tan0014568
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009409 - response to cold (biological process) GO:0009637 - response to blue light (biological process) GO:0010218 - response to far red light (biological process) GO:0010378 - temperature compensation of the circadian clock (biological process) GO:0042542 - response to hydrogen peroxide (biological process) GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process) GO:0005654 - nucleoplasm (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR026211 - GIGANTEA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022143670.1 protein GIGANTEA-like isoform X2 [Momordica charantia]

1.7e-103

93.43

Show/hide

Query:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL
        +AQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAI+LPIISCIIDGTLEYNRNGP FASFISLFCPGTENDYSEQWAL
Subjt:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL

Query:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP
        ACGEILRILTHYNRPIYK EQQN ETERSNSG LATTSD+N+ EF Q+PL QERKPIR LSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP
Subjt:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP

XP_022143671.1 protein GIGANTEA-like isoform X3 [Momordica charantia]

1.7e-103

93.43

Show/hide

Query:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL
        +AQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAI+LPIISCIIDGTLEYNRNGP FASFISLFCPGTENDYSEQWAL
Subjt:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL

Query:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP
        ACGEILRILTHYNRPIYK EQQN ETERSNSG LATTSD+N+ EF Q+PL QERKPIR LSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP
Subjt:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP

XP_022935845.1 protein GIGANTEA-like isoform X1 [Cucurbita moschata]

5.8e-104

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Query:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL
        +AQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFV HHPEHGHAIILPIISCIIDGTLEYNRN P FASFISLFCPGTEN YSEQWAL
Subjt:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL

Query:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
        ACGEILRILTHYNRPIYK EQ+NGETERSNSG +ATT DTN+GEF QVPL  ERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
Subjt:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS

XP_022935848.1 protein GIGANTEA-like isoform X3 [Cucurbita moschata]

5.8e-104

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Query:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL
        +AQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFV HHPEHGHAIILPIISCIIDGTLEYNRN P FASFISLFCPGTEN YSEQWAL
Subjt:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL

Query:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
        ACGEILRILTHYNRPIYK EQ+NGETERSNSG +ATT DTN+GEF QVPL  ERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
Subjt:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS

XP_022976904.1 protein GIGANTEA-like isoform X2 [Cucurbita maxima]

3.4e-104

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Query:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL
        +AQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFV HHPEHGHAIILPIISCIIDGTLEYNRN P F SFISLFCPGTEN YSEQWAL
Subjt:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL

Query:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
        ACGEILRILTHYNRPIYKMEQ+NGETERSNSG +AT SDTN+GEF QVPL  ERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
Subjt:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CQ08 protein GIGANTEA-like isoform X1

8.2e-104

93.43

Show/hide

Query:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL
        +AQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAI+LPIISCIIDGTLEYNRNGP FASFISLFCPGTENDYSEQWAL
Subjt:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL

Query:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP
        ACGEILRILTHYNRPIYK EQQN ETERSNSG LATTSD+N+ EF Q+PL QERKPIR LSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP
Subjt:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP

A0A6J1CRI0 protein GIGANTEA-like isoform X4

8.2e-104

93.43

Show/hide

Query:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL
        +AQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAI+LPIISCIIDGTLEYNRNGP FASFISLFCPGTENDYSEQWAL
Subjt:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL

Query:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP
        ACGEILRILTHYNRPIYK EQQN ETERSNSG LATTSD+N+ EF Q+PL QERKPIR LSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP
Subjt:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPP

A0A6J1F5V5 protein GIGANTEA-like isoform X1

2.8e-104

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Query:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL
        +AQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFV HHPEHGHAIILPIISCIIDGTLEYNRN P FASFISLFCPGTEN YSEQWAL
Subjt:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL

Query:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
        ACGEILRILTHYNRPIYK EQ+NGETERSNSG +ATT DTN+GEF QVPL  ERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
Subjt:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS

A0A6J1FBN3 protein GIGANTEA-like isoform X3

2.8e-104

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Query:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL
        +AQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFV HHPEHGHAIILPIISCIIDGTLEYNRN P FASFISLFCPGTEN YSEQWAL
Subjt:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL

Query:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
        ACGEILRILTHYNRPIYK EQ+NGETERSNSG +ATT DTN+GEF QVPL  ERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
Subjt:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS

A0A6J1IPZ2 protein GIGANTEA-like isoform X2

1.6e-104

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Query:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL
        +AQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFV HHPEHGHAIILPIISCIIDGTLEYNRN P F SFISLFCPGTEN YSEQWAL
Subjt:  QAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWAL

Query:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
        ACGEILRILTHYNRPIYKMEQ+NGETERSNSG +AT SDTN+GEF QVPL  ERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS
Subjt:  ACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTS

SwissProt top hits

e value

%identity

Alignment

Q9AWL7 Protein GIGANTEA

1.6e-72

67.16

Show/hide

Query:  QAQCSAYVEYLGQFT--SERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQW
        QAQ  AYVEY GQFT  SE+F EDIA+LI+S + SKEKRL D+VLA FVLHHPEHGHA++ PI+S IIDGTL Y+RNG  F SFISLF   +E +YSEQW
Subjt:  QAQCSAYVEYLGQFT--SERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQW

Query:  ALACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQ-ERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAA-GELR
        ALACGEILR+LTHYNRPI+K++ Q+ E E S++   A++ ++ E      P  + +RKP+RPLSPWITDILLAAPLGIRSDYFRWC GVMGKYAA GEL+
Subjt:  ALACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQ-ERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAA-GELR

Query:  PPTS
        PPT+
Subjt:  PPTS

Q9SQI2 Protein GIGANTEA

6.5e-82

73.1

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Query:  QCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWALAC
        Q  AYVEY GQFTSE+F +DIAEL+R ++ S EKRL DDVLA+FVLHHPEHGHA+ILPIISC+IDG+L Y++    FASFISL CP +ENDYSEQWALAC
Subjt:  QCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWALAC

Query:  GEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPT
        GEILRILTHYNRPIYK EQQNG+TER+      T+        A  P   ERKP+RPLSPWI+DILLAAPLGIRSDYFRWCSGVMGKYAAGEL+PPT
Subjt:  GEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPT

Arabidopsis top hits

e value

%identity

Alignment

AT1G22770.1 gigantea protein (GI)

4.6e-83

73.1

Show/hide

Query:  QCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWALAC
        Q  AYVEY GQFTSE+F +DIAEL+R ++ S EKRL DDVLA+FVLHHPEHGHA+ILPIISC+IDG+L Y++    FASFISL CP +ENDYSEQWALAC
Subjt:  QCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYSEQWALAC

Query:  GEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPT
        GEILRILTHYNRPIYK EQQNG+TER+      T+        A  P   ERKP+RPLSPWI+DILLAAPLGIRSDYFRWCSGVMGKYAAGEL+PPT
Subjt:  GEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGCAACTCTGTATTTCTTACTGCACTCTCATTTTCCATTTACAGGCTCAGTGTTCTGCATATGTTGAGTACTTGGGTCAGTTTACATCAGAACGATTTTCTGAGGA
CATTGCTGAGCTGATTCGCAGCCGTTTCCAATCAAAGGAAAAGCGCCTCTTCGATGATGTTTTAGCTGTGTTTGTCCTTCATCATCCCGAGCATGGGCATGCTATTATTC
TTCCGATCATTTCTTGTATAATTGATGGCACCCTGGAATATAACAGAAATGGCCCTCTATTTGCCTCTTTCATATCCTTATTCTGTCCAGGCACAGAGAATGATTATTCT
GAACAATGGGCCCTTGCATGTGGGGAGATATTGCGGATCCTGACTCATTACAATCGTCCAATATACAAGATGGAACAACAAAATGGTGAAACGGAAAGAAGCAATAGTGG
CGGCCTTGCTACAACAAGTGATACCAATGAGGGGGAATTTGCTCAAGTGCCTCTGCTACAAGAAAGGAAACCTATAAGACCTTTGTCCCCTTGGATTACTGATATATTGC
TTGCTGCACCATTGGGAATCAGAAGTGACTATTTCCGCTGGTGCAGTGGTGTAATGGGTAAATATGCTGCTGGAGAACTCAGGCCACCCACATCAGGTTTGTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MMQLCISYCTLIFHLQAQCSAYVEYLGQFTSERFSEDIAELIRSRFQSKEKRLFDDVLAVFVLHHPEHGHAIILPIISCIIDGTLEYNRNGPLFASFISLFCPGTENDYS
EQWALACGEILRILTHYNRPIYKMEQQNGETERSNSGGLATTSDTNEGEFAQVPLLQERKPIRPLSPWITDILLAAPLGIRSDYFRWCSGVMGKYAAGELRPPTSGL

Tan0014568 (gene) of Snake gourd v1 genome