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Tan0014620 (gene) of Snake gourd v1 genome

Gene IDTan0014620
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase
Genome locationLG01:99621796..99622017
RNA-Seq ExpressionTan0014620
SyntenyTan0014620
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035138.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.9e-1765.71Show/hide
Query:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR
        ++V EYEKK+TELS+YA  IVASE DRC+RFE GLR EIRTPVTA ++W   S+LVETALRVE+S+ +++
Subjt:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.0e-1769.7Show/hide
Query:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSL
        MTV EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA ++W + SKLVE ALRVE+SL
Subjt:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSL

KAA0057197.1 gag/pol protein [Cucumis melo var. makuwa]4.0e-1764.29Show/hide
Query:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR
        ++V+EYE+K+TELS+YA  IVASE DRC+RFE GLR EIRTP+TA ++W+  S+LVETALRVE+S+V+++
Subjt:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR

TYK18765.1 gag/pol protein [Cucumis melo var. makuwa]4.0e-1764.29Show/hide
Query:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR
        ++V+EYE+K+TELS+YA  IVASE DRC+RFE GLR EIRTP+TA ++W+  S+LVETALRVE+S+V+++
Subjt:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR

XP_008464978.1 PREDICTED: uncharacterized protein LOC103502718 [Cucumis melo]4.0e-1764.29Show/hide
Query:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR
        ++V+EYE+K+TELS+YA  IVASE DRC+RFE GLR EIRTP+TA ++W+  S+LVETALRVE+S+V+++
Subjt:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR

TrEMBL top hitse value%identityAlignment
A0A1S3CMU0 uncharacterized protein LOC1035027182.0e-1764.29Show/hide
Query:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR
        ++V+EYE+K+TELS+YA  IVASE DRC+RFE GLR EIRTP+TA ++W+  S+LVETALRVE+S+V+++
Subjt:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR

A0A5A7SX06 DNA/RNA polymerases superfamily protein3.3e-1765.71Show/hide
Query:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR
        ++V EYEKK+TELS+YA  IVASE DRC+RFE GLR EIRTPVTA ++W   S+LVETALRVE+S+ +++
Subjt:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR

A0A5A7URC7 Gag/pol protein2.0e-1764.29Show/hide
Query:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR
        ++V+EYE+K+TELS+YA  IVASE DRC+RFE GLR EIRTP+TA ++W+  S+LVETALRVE+S+V+++
Subjt:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR

A0A5D3BB91 Reverse transcriptase4.4e-1769.7Show/hide
Query:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSL
        MTV EYEKK+TELSKYA+ ++  E +RCKRFE+GLR EIRTPVTA ++W + SKLVE ALRVE+SL
Subjt:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSL

A0A5D3D5E2 Gag/pol protein2.0e-1764.29Show/hide
Query:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR
        ++V+EYE+K+TELS+YA  IVASE DRC+RFE GLR EIRTP+TA ++W+  S+LVETALRVE+S+V+++
Subjt:  MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTAATAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAGCGAGATAGATCGATGCAAGAGGTTCGAGGATGGTTTGCGAGC
AGAGATCCGAACGCCTGTGACAGCAAGTTCGGAGTGGGTCGAGCTCTCAAAGCTTGTGGAGACGGCATTACGAGTAGAGCGAAGCCTAGTAGATGACAGAATGGGAAAAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTAATAGAATATGAGAAGAAGTTCACAGAGTTATCAAAGTATGCTAGCACTATTGTTGCAAGCGAGATAGATCGATGCAAGAGGTTCGAGGATGGTTTGCGAGC
AGAGATCCGAACGCCTGTGACAGCAAGTTCGGAGTGGGTCGAGCTCTCAAAGCTTGTGGAGACGGCATTACGAGTAGAGCGAAGCCTAGTAGATGACAGAATGGGAAAAT
GA
Protein sequenceShow/hide protein sequence
MTVIEYEKKFTELSKYASTIVASEIDRCKRFEDGLRAEIRTPVTASSEWVELSKLVETALRVERSLVDDRMGK