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Tan0014621 (gene) of Snake gourd v1 genome

Gene IDTan0014621
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLeucine-rich repeat (LRR) family protein
Genome locationLG11:9404442..9404753
RNA-Seq ExpressionTan0014621
SyntenyTan0014621
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN46160.1 hypothetical protein Csa_005439 [Cucumis sativus]1.5e-0446.73Show/hide
Query:  MKSSMASFVFAIFAALFLL----LSLPSTTHSSPINNLHYSLPSLYHRKTLSPPPPPPPPLSTNPDPSSLPQPCETASPPLVSPSPPPPPMFQWPPDFVS
        MKSSM+S +FAI   L LL    LSL    HSSP  N H      +HRK L     PPPPL            C T    +  P PPPPP FQWPP+ V 
Subjt:  MKSSMASFVFAIFAALFLL----LSLPSTTHSSPINNLHYSLPSLYHRKTLSPPPPPPPPLSTNPDPSSLPQPCETASPPLVSPSPPPPPMFQWPPDFVS

Query:  KSPSPPF
        KSP PPF
Subjt:  KSPSPPF
TrEMBL top hitse value%identityAlignment
A0A0A0K8T1 Uncharacterized protein7.0e-0546.73Show/hide
Query:  MKSSMASFVFAIFAALFLL----LSLPSTTHSSPINNLHYSLPSLYHRKTLSPPPPPPPPLSTNPDPSSLPQPCETASPPLVSPSPPPPPMFQWPPDFVS
        MKSSM+S +FAI   L LL    LSL    HSSP  N H      +HRK L     PPPPL            C T    +  P PPPPP FQWPP+ V 
Subjt:  MKSSMASFVFAIFAALFLL----LSLPSTTHSSPINNLHYSLPSLYHRKTLSPPPPPPPPLSTNPDPSSLPQPCETASPPLVSPSPPPPPMFQWPPDFVS

Query:  KSPSPPF
        KSP PPF
Subjt:  KSPSPPF
SwissProt top hitse value%identityAlignment
Q9T0K5 Leucine-rich repeat extensin-like protein 37.5e-0448.44Show/hide
Query:  PSLYHRKTLSPPPPPPPPLSTNPDPSSLPQPCETASPPLVSPSPPPPPMFQWPPDFVSKSPSPP
        P +Y      PPPPPPPP+ + P PS  P P    SPP   P PPPPP++  PP  V  SP PP
Subjt:  PSLYHRKTLSPPPPPPPPLSTNPDPSSLPQPCETASPPLVSPSPPPPPMFQWPPDFVSKSPSPP
Arabidopsis top hitse value%identityAlignment
AT4G13340.1 Leucine-rich repeat (LRR) family protein5.3e-0548.44Show/hide
Query:  PSLYHRKTLSPPPPPPPPLSTNPDPSSLPQPCETASPPLVSPSPPPPPMFQWPPDFVSKSPSPP
        P +Y      PPPPPPPP+ + P PS  P P    SPP   P PPPPP++  PP  V  SP PP
Subjt:  PSLYHRKTLSPPPPPPPPLSTNPDPSSLPQPCETASPPLVSPSPPPPPMFQWPPDFVSKSPSPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCTTCCATGGCCTCCTTCGTTTTCGCCATTTTTGCAGCTTTATTCCTCTTATTGAGCTTGCCGTCCACCACCCACTCTTCTCCGATCAATAACCTTCATTACTC
ACTGCCTTCTCTTTATCACAGAAAAACTCTTTCGCCTCCACCACCGCCACCGCCACCGCTTTCCACAAACCCAGACCCTTCTTCTCTACCTCAGCCATGTGAAACGGCCT
CACCGCCCTTAGTTTCGCCATCGCCGCCGCCACCGCCTATGTTTCAGTGGCCGCCAGATTTCGTCTCAAAATCGCCGTCGCCCCCCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCTTCCATGGCCTCCTTCGTTTTCGCCATTTTTGCAGCTTTATTCCTCTTATTGAGCTTGCCGTCCACCACCCACTCTTCTCCGATCAATAACCTTCATTACTC
ACTGCCTTCTCTTTATCACAGAAAAACTCTTTCGCCTCCACCACCGCCACCGCCACCGCTTTCCACAAACCCAGACCCTTCTTCTCTACCTCAGCCATGTGAAACGGCCT
CACCGCCCTTAGTTTCGCCATCGCCGCCGCCACCGCCTATGTTTCAGTGGCCGCCAGATTTCGTCTCAAAATCGCCGTCGCCCCCCTTCTAG
Protein sequenceShow/hide protein sequence
MKSSMASFVFAIFAALFLLLSLPSTTHSSPINNLHYSLPSLYHRKTLSPPPPPPPPLSTNPDPSSLPQPCETASPPLVSPSPPPPPMFQWPPDFVSKSPSPPF