CuGenDBv2

Gene ID	Tan0014640
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Trinucleotide repeat-containing gene 18 protein-like protein
Genome location	LG11:882913..884934
RNA-Seq Expression	Tan0014640
Synteny	Tan0014640
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602714.1 hypothetical protein SDJN03_07947, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-61

87.94

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAA-AAEQEPSAELWSGGSNGKAVTRSLSD
        +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQN QRDPFFDAFVECSKEP+AA AAEQ+P+AELW+ GSNGKAV+RSLSD
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAA-AAEQEPSAELWSGGSNGKAVTRSLSD

Query:  RFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG
        RFGFLN YSSCKRTCGVSESIVY PR  RSSFDLLNHR GG
Subjt:  RFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

KAG7033401.1 hypothetical protein SDJN02_07457, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-61

87.94

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAA-AAEQEPSAELWSGGSNGKAVTRSLSD
        +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQN QRDPFFDAFVECSKEP+AA AAEQ+P+AELW+ GSNGKAV+RSLSD
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAA-AAEQEPSAELWSGGSNGKAVTRSLSD

Query:  RFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG
        RFGFLN YSSCKRTCGVSESIVY PR  RSSFDLLNHR GG
Subjt:  RFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

XP_011649907.1 uncharacterized protein LOC105434677 [Cucumis sativus]

3.6e-62

88.57

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWSGGSNGKAVTRSLSDR
        HLPGIPKKQSPARLRR SASPL+S LPLPPNSTTP SSKRFGF DWRKSNRQN QRDPFFDAF+ECSKEPT AAA     AELWSGGSNGKA+TRSLSDR
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWSGGSNGKAVTRSLSDR

Query:  FGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG
        FGFLNLYSSCKRTCGVSESIVYLPRT RSSFDLLN RTGG
Subjt:  FGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

XP_023528120.1 uncharacterized protein LOC111791129 [Cucurbita pepo subsp. pepo]

3.9e-61

87.23

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAA-AAEQEPSAELWSGGSNGKAVTRSLSD
        +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQN QRDPFFDAFVECSKEP+AA AAEQ+P+AELW+ GSNGKAV+RSLSD
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAA-AAEQEPSAELWSGGSNGKAVTRSLSD

Query:  RFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG
        R GFLN YSSCKRTCGVSESIVY PR  RSSFDLLNHR GG
Subjt:  RFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

XP_038885392.1 uncharacterized protein LOC120075791 [Benincasa hispida]

1.8e-61

87.32

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWS--GGSNGKAVTRSLS
        HLPGIPKKQSPARLRR SASPL+SLLPLPPNS TPPSSKRFGF DWRKSNRQN QRDPFFDAF+ECSKEP+ AAA     AELWS  GGSNGKA+TRSLS
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWS--GGSNGKAVTRSLS

Query:  DRFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG
        DRFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLN R+GG
Subjt:  DRFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQP3 Uncharacterized protein

1.7e-62

88.57

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWSGGSNGKAVTRSLSDR
        HLPGIPKKQSPARLRR SASPL+S LPLPPNSTTP SSKRFGF DWRKSNRQN QRDPFFDAF+ECSKEPT AAA     AELWSGGSNGKA+TRSLSDR
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWSGGSNGKAVTRSLSDR

Query:  FGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG
        FGFLNLYSSCKRTCGVSESIVYLPRT RSSFDLLN RTGG
Subjt:  FGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

A0A1S3B2H5 uncharacterized protein LOC103485423

1.6e-60

86.43

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWSGGSNGKAVTRSLSDR
        HLPGIPKKQSPARLRR SASPL+SLLPLPPNSTT  SSKRFGF DWRKSNRQN QRDPFFDAF+ECSKEPT AA +    AELWSG SNGKA+TRSLSDR
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWSGGSNGKAVTRSLSDR

Query:  FGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG
        FGFLNLYSSCKRTCGVSESIVYLPRTP SSFDLLN R+GG
Subjt:  FGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

A0A5D3C8I6 Trinucleotide repeat-containing gene 18 protein-like protein

1.6e-60

86.43

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWSGGSNGKAVTRSLSDR
        HLPGIPKKQSPARLRR SASPL+SLLPLPPNSTT  SSKRFGF DWRKSNRQN QRDPFFDAF+ECSKEPT AA +    AELWSG SNGKA+TRSLSDR
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWSGGSNGKAVTRSLSDR

Query:  FGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG
        FGFLNLYSSCKRTCGVSESIVYLPRTP SSFDLLN R+GG
Subjt:  FGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

A0A6J1GNZ5 uncharacterized protein LOC111456137

4.2e-61

87.23

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAA-AAEQEPSAELWSGGSNGKAVTRSLSD
        +LPGIPKKQSPARLR DSASPLTSLLPLPP STT PSSKRFGFHDWRKSNRQN QRDPFFDAFVECSKEP+AA AAEQ+P+AELW+ GSNGKAV+RSLSD
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAA-AAEQEPSAELWSGGSNGKAVTRSLSD

Query:  RFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG
        RFGFLN  SSCKRTCGVSESIVY PR  RSSFDLLNHR GG
Subjt:  RFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

A0A6J1JTM6 uncharacterized protein LOC111487739

2.7e-60

85.82

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Query:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAA-AAEQEPSAELWSGGSNGKAVTRSLSD
        +LPGIPKKQSPARLR DSASPLT LLPLPP ST  PSSKRFGFHDWRKSNRQN QRDPFFDAFVECSKEP+AA AAEQ+P+AELW+ GSNGKAV+RSLSD
Subjt:  HLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAA-AAEQEPSAELWSGGSNGKAVTRSLSD

Query:  RFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG
        RFGFLN YSSCKRTC VSESIVY PR  RSSFDLLNHR+GG
Subjt:  RFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G22680.1 unknown protein

5.0e-14

40.29

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Query:  LPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWSGGSNGKAVTRSLSDRF
        LPG PK+ S  R        L++LLPLPP+ +    + R      +K+      RDPF  A VECSK  T             +GG + K + +S S   
Subjt:  LPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECSKEPTAAAAEQEPSAELWSGGSNGKAVTRSLSDRF

Query:  GFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG
        G LNLYSSC+R C VSESIVYLP++  +S+D L+  T G
Subjt:  GFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

AT1G71970.1 unknown protein

8.6e-14

37.67

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Query:  LPGIPKKQSPARLRRDSASPLTSLLPLPP--NSTTPPSSKRFGFHDWRKSNRQNLQ-RDPFFDAFVECSKEPTAAAAEQEPSAELW---------SGGSN
        LPG PK  S     R +      LLPLPP  N + P + K+   ++  K N   +  +DPF  A +ECSK+    +   +    +          SGGS+
Subjt:  LPGIPKKQSPARLRRDSASPLTSLLPLPP--NSTTPPSSKRFGFHDWRKSNRQNLQ-RDPFFDAFVECSKEPTAAAAEQEPSAELW---------SGGSN

Query:  GKAVTRSLSDRFGFLNLYSSCKRTCGVSESIVYLPRTPR-SSFDLL
              S+ DRFG +NLY SC+RTC V+ESIVYLPR  + +S+D L
Subjt:  GKAVTRSLSDRFGFLNLYSSCKRTCGVSESIVYLPRTPR-SSFDLL

Sequences

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CDS sequence

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ATGGCTTCCGACCGGCTACCGGCTGAGCCGAGCCTCGAGAGAAGTGCACTGTTACAGGAAGCTAGGGGGAGAAAACCATGGCTTAACCACATGATCGATACGCGATCTGC
TCTCGTTACAGGCCAGACGCATTTGCCCGGAATTCCCAAGAAACAGTCTCCGGCGAGGCTCCGGCGAGATTCCGCTTCTCCTCTGACCTCTCTCCTCCCTCTGCCTCCCA
ATTCCACCACTCCACCGTCCTCCAAGCGCTTCGGATTTCACGATTGGAGGAAATCAAACCGCCAAAACTTGCAGCGAGATCCTTTCTTCGACGCCTTCGTCGAGTGCTCT
AAAGAACCTACCGCCGCCGCCGCCGAACAAGAGCCGTCCGCCGAGCTCTGGAGCGGCGGCAGCAATGGCAAAGCAGTTACGAGAAGCCTGAGCGACCGATTCGGATTCTT
GAATCTGTACTCTTCTTGCAAACGAACGTGCGGCGTTTCGGAATCCATCGTGTATCTTCCGAGAACGCCGAGGAGTTCGTTCGATCTGCTAAACCACCGCACCGGCGGGT
GA

mRNA sequence

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Protein sequence

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MASDRLPAEPSLERSALLQEARGRKPWLNHMIDTRSALVTGQTHLPGIPKKQSPARLRRDSASPLTSLLPLPPNSTTPPSSKRFGFHDWRKSNRQNLQRDPFFDAFVECS
KEPTAAAAEQEPSAELWSGGSNGKAVTRSLSDRFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNHRTGG

Tan0014640 (gene) of Snake gourd v1 genome