; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0014644 (gene) of Snake gourd v1 genome

Gene IDTan0014644
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG01:113937912..113938264
RNA-Seq ExpressionTan0014644
SyntenyTan0014644
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]8.8e-3075.82Show/hide
Query:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII
        M+R+SK Y   R +LSREQL LIFRNHD D DGRLS TELT+AFRYIGA +P YRA+HAL HADSDRDGFI EKDFELLVNYAE+R+YT+I
Subjt:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3487.64Show/hide
Query:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYT
        MARKSK Y Q RPKLSREQLS+IFRNHDGDGDGRLS TELT AFRYIGA +PSYRA HALLH DSD DGFIGEKDFELLVNYAEKRKYT
Subjt:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYT

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3382.42Show/hide
Query:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII
        MARK+KM  Q RPKLSREQLS+IFRNHDGDGDGRLSATELT+AFRYIGA +PSYRA HAL + DSDRDGFIGEKDFE LVNY EKR YTI+
Subjt:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-3586.81Show/hide
Query:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII
        MARKSK Y Q RPKLSREQLS+IFRNHDGDGDGRLS TELT AFRYIGA +PSYRA HALLH DSD DGFIGEKDFELLVNYAEKRKYT+I
Subjt:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]4.7e-3180.22Show/hide
Query:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII
        M+RKSK Y   R KLSREQL LIFRNHD D DGRLS TELT+AFRYIGA +P+YRA+HALLHADSDRDGFIGEKDFE LVNYAE+R+YTII
Subjt:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein2.3e-3180.22Show/hide
Query:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII
        M+RKSK Y   R KLSREQL LIFRNHD D DGRLS TELT+AFRYIGA +P+YRA+HALLHADSDRDGFIGEKDFE LVNYAE+R+YTII
Subjt:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII

A0A5A7VDB9 Putative calcium-binding protein CML274.3e-3075.82Show/hide
Query:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII
        M+R+SK Y   R +LSREQL LIFRNHD D DGRLS TELT+AFRYIGA +P YRA+HAL HADSDRDGFI EKDFELLVNYAE+R+YT+I
Subjt:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII

A0A5N6RQV2 Uncharacterized protein1.5e-1450Show/hide
Query:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTI
        M +   M++      +R+QL  IFR+HD DGDG+LS  E+  AF Y+G+   SYRA  ALLHADSD DG++GE++ + LV+YA K  YTI
Subjt:  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTI

A0A6J1KUW2 calmodulin-like4.8e-1352.78Show/hide
Query:  KLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEK
        KLSR Q+  IF  HD DGDG LS +ELT+AF + G+++P Y+A + L +AD+D DG I E++ E LV+YAE+
Subjt:  KLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEK

A5AWP8 Uncharacterized protein1.6e-1353.95Show/hide
Query:  LSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTI
        L  +QL  IF+ HD +GDG+L+  EL QAF+++GAL+P +RA  AL HAD+D DG I EK+ + LV YA K  YTI
Subjt:  LSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTI

SwissProt top hitse value%identityAlignment
Q0DJV6 Probable calcium-binding protein CML181.2e-0537.93Show/hide
Query:  QLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDF
        +L  +FR +D +GDG++SA EL    R +GA +     +  +   DSDRDGF+   +F
Subjt:  QLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDF

Q39419 Polcalcin Bet v 43.5e-0538.1Show/hide
Query:  KLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDF
        K  RE+   IF+  D +GDG++SA EL +A + +G++ P    +H +   D+D DGFI  ++F
Subjt:  KLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDF

Q6L4D4 Probable calcium-binding protein CML151.6e-0535.38Show/hide
Query:  RPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDF
        RP  + ++   +FR  D +GDGR+S  EL   FR +G  +        +  ADSD DG+I   +F
Subjt:  RPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDF

Q8L3R2 Probable calcium-binding protein CML411.4e-0640.98Show/hide
Query:  SREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDF
        S+E+L  +F + D DGDG++SA EL   F  +G  +    AQ A+   D+D DG +G +DF
Subjt:  SREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDF

Q8RYJ9 Putative calcium-binding protein CML231.0e-0435.21Show/hide
Query:  LSREQLSLIFRNHDGDGDGRLSATELTQAFR-YIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAE
        ++ ++   +F + D DGDG++SATEL    +  +G  MP    Q  +  AD+D DG + E++F  LV   E
Subjt:  LSREQLSLIFRNHDGDGDGRLSATELTQAFR-YIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAE

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein3.6e-0533.87Show/hide
Query:  EQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELL
        E+L  +F   D +GDG++S  EL   F+ +G           L   D+DRDG+I   +F  L
Subjt:  EQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELL

AT1G18210.2 Calcium-binding EF-hand family protein3.6e-0533.87Show/hide
Query:  EQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELL
        E+L  +F   D +GDG++S  EL   F+ +G           L   D+DRDG+I   +F  L
Subjt:  EQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELL

AT1G76640.1 Calcium-binding EF-hand family protein2.8e-0536.07Show/hide
Query:  LSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLV
        L  +F   D + DGR+SA EL ++F+ +G  M    A+ A+  +D D DG +   +F LL+
Subjt:  LSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLV

AT3G50770.1 calmodulin-like 411.0e-0740.98Show/hide
Query:  SREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDF
        S+E+L  +F + D DGDG++SA EL   F  +G  +    AQ A+   D+D DG +G +DF
Subjt:  SREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDF

AT3G51920.1 calmodulin 92.1e-0531.08Show/hide
Query:  MYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLV
        M Q    + + ++L  +FR  D DGDG +S  EL +  + +G  + +  A+H +  AD D DGF+   +F  ++
Subjt:  MYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGAAAAGCAAGATGTACCAGCAGCAGAGGCCGAAGCTATCTCGAGAGCAACTCAGCCTAATCTTCAGAAACCACGACGGCGATGGTGACGGCCGCCTGAGCGC
CACCGAGCTCACCCAAGCTTTTCGGTATATCGGTGCCCTTATGCCGTCGTACAGAGCTCAACACGCTCTTCTTCACGCAGATTCCGACAGAGATGGATTTATCGGCGAGA
AGGATTTTGAATTGCTTGTTAATTATGCTGAAAAACGAAAGTACACTATCATTTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAATCAAAAGAATCACAAAACAAAAATACAAGAAACAGATTGGACGGCGATCGATGGCAAGGAAAAGCAAGATGTACCAGCAGCAGAGGCCGAAGCTATCTCGAGA
GCAACTCAGCCTAATCTTCAGAAACCACGACGGCGATGGTGACGGCCGCCTGAGCGCCACCGAGCTCACCCAAGCTTTTCGGTATATCGGTGCCCTTATGCCGTCGTACA
GAGCTCAACACGCTCTTCTTCACGCAGATTCCGACAGAGATGGATTTATCGGCGAGAAGGATTTTGAATTGCTTGTTAATTATGCTGAAAAACGAAAGTACACTATCATT
TGAATTTTGAATTTTGAATTTTT
Protein sequenceShow/hide protein sequence
MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII