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Tan0014680 (gene) of Snake gourd v1 genome

Gene IDTan0014680
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionacyl-coenzyme A thioesterase 13
Genome locationLG05:341272..341938
RNA-Seq ExpressionTan0014680
SyntenyTan0014680
Gene Ontology termsGO:0031047 - gene silencing by RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0047617 - acyl-CoA hydrolase activity (molecular function)
InterPro domainsIPR003736 - Phenylacetic acid degradation-related domain
IPR006683 - Thioesterase domain
IPR029069 - HotDog domain superfamily
IPR039298 - Acyl-coenzyme A thioesterase 13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571321.1 Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia]5.1e-4284.26Show/hide
Query:  MDKTKRYLEKH-SDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLS
        M+KTKRYLEKH  DDDRKVAS +D LPF+FY+NF+MT LRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIG+ A+KTLG+ TTGVS++INLS
Subjt:  MDKTKRYLEKH-SDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLS

Query:  YLDAAYLD
        YLDAAYLD
Subjt:  YLDAAYLD

XP_022931994.1 acyl-coenzyme A thioesterase 13 [Cucurbita moschata]4.3e-4183.33Show/hide
Query:  MDKTKRYLEKH-SDDDRKVA-SVDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLS
        M+KTKRYLEKH  DDDRKVA S+D LP +FY+NF+MT LRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIG+ A+KTLG+ TTGVS++INLS
Subjt:  MDKTKRYLEKH-SDDDRKVA-SVDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLS

Query:  YLDAAYLD
        YLDAAYLD
Subjt:  YLDAAYLD

XP_022973825.1 acyl-coenzyme A thioesterase 13 [Cucurbita maxima]3.3e-4182.41Show/hide
Query:  MDKTKRYLEKH-SDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLS
        M+KTKRYLEKH  DDDRKVAS +D LPF+FY+NF+MT +RVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIG+ A+ TLG+ TTGVS++INLS
Subjt:  MDKTKRYLEKH-SDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLS

Query:  YLDAAYLD
        YLDAAYLD
Subjt:  YLDAAYLD

XP_023512633.1 acyl-coenzyme A thioesterase 13 [Cucurbita pepo subsp. pepo]1.5e-4184.11Show/hide
Query:  MDKTKRYLEKHSDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSY
        M+KTKRYLEKH DDDRK+AS +D LPF+FY+NF+MT LRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIG+ A+KTLG+ TTGVS++INLSY
Subjt:  MDKTKRYLEKHSDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSY

Query:  LDAAYLD
        LDAAYLD
Subjt:  LDAAYLD

XP_038901620.1 acyl-coenzyme A thioesterase 13 [Benincasa hispida]1.8e-4283.18Show/hide
Query:  MDKTKRYLEKHSDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSY
        M+K KRYLEKH DDDR VAS +D LPF+FY+NF+MTGLRVDLI+PGRIVCSLKVPARLLN NNSLHGGASASLVDCIG+AA+KTLG+ TTGVS++INLSY
Subjt:  MDKTKRYLEKHSDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSY

Query:  LDAAYLD
        LDAAYLD
Subjt:  LDAAYLD

TrEMBL top hitse value%identityAlignment
A0A6J1EVT6 acyl-coenzyme A thioesterase 132.1e-4183.33Show/hide
Query:  MDKTKRYLEKH-SDDDRKVA-SVDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLS
        M+KTKRYLEKH  DDDRKVA S+D LP +FY+NF+MT LRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIG+ A+KTLG+ TTGVS++INLS
Subjt:  MDKTKRYLEKH-SDDDRKVA-SVDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLS

Query:  YLDAAYLD
        YLDAAYLD
Subjt:  YLDAAYLD

A0A6J1G7D0 acyl-coenzyme A thioesterase 13-like2.3e-4080.37Show/hide
Query:  MDKTKRYLEKHSDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSY
        M+K K  LEKH+DDDRKVAS +DGLP +FY++F+M GLRVDLIEPGRIVC+LKVPARLLN NNSLHGGASASLVDCIG+AAI T+GSTTTGVS++I+LSY
Subjt:  MDKTKRYLEKHSDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSY

Query:  LDAAYLD
        LDAAYLD
Subjt:  LDAAYLD

A0A6J1I0D7 acyl-coenzyme A thioesterase 13-like2.3e-4082.08Show/hide
Query:  MDKTKRYLEKHSDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSY
        MD +KR +EKHSDDD KVAS +DGLPFKFYQ F++ GLRVDLI+PGRIVCSLK+PARLLN+NNSLHGGASASLVDCIGAAAIKTLGSTTTGVS+D+NLSY
Subjt:  MDKTKRYLEKHSDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSY

Query:  LDAAYL
         D A+L
Subjt:  LDAAYL

A0A6J1I1S3 acyl-coenzyme A thioesterase 13-like2.3e-4080.37Show/hide
Query:  MDKTKRYLEKHSDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSY
        M+K K  LEKH+DDDRKVAS +DGLP +FY++F+M GLRVDLIEPGRIVC+LKVPARLLN NNSLHGGASASLVDCIG+AAI T+GSTTTGVS++I+LSY
Subjt:  MDKTKRYLEKHSDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSY

Query:  LDAAYLD
        LDAAYLD
Subjt:  LDAAYLD

A0A6J1ICC5 acyl-coenzyme A thioesterase 131.6e-4182.41Show/hide
Query:  MDKTKRYLEKH-SDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLS
        M+KTKRYLEKH  DDDRKVAS +D LPF+FY+NF+MT +RVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIG+ A+ TLG+ TTGVS++INLS
Subjt:  MDKTKRYLEKH-SDDDRKVAS-VDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLS

Query:  YLDAAYLD
        YLDAAYLD
Subjt:  YLDAAYLD

SwissProt top hitse value%identityAlignment
P87304 Putative esterase C31F10.024.0e-0541.79Show/hide
Query:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSYLDAAYLDVSSI
        PG + CSLK+    LN   +LHGG  A+L D  G+ A+ + G   +GVSID+N ++L +     SSI
Subjt:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSYLDAAYLDVSSI

Q5R833 Acyl-coenzyme A thioesterase 131.4e-0538.71Show/hide
Query:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSYLDAAYL
        PG+++C +KV     N   +LHGG +A+LVD I   A+        GVS+D+N++Y+  A L
Subjt:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSYLDAAYL

Q9CQR4 Acyl-coenzyme A thioesterase 135.2e-0536.67Show/hide
Query:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSYLDAA
        P +++C +KV  +  N+  +LHGG +A+LVD I   A+        GVS+D+N++Y+  A
Subjt:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSYLDAA

Q9NPJ3 Acyl-coenzyme A thioesterase 131.4e-0538.71Show/hide
Query:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSYLDAAYL
        PG+++C +KV     N   +LHGG +A+LVD I   A+        GVS+D+N++Y+  A L
Subjt:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSYLDAAYL

Arabidopsis top hitse value%identityAlignment
AT1G04290.1 Thioesterase superfamily protein7.6e-2854.72Show/hide
Query:  MDKTKRYLEKHSDDDRKVASVDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSYL
        ++  K+YLE   D+  K   V  LP +F + F+  GL+VDLIEPGRIVCS+K+P  LLN    LHGGA+A+LVD IG+A I T G++ +GVS++IN+SYL
Subjt:  MDKTKRYLEKHSDDDRKVASVDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSYL

Query:  DAAYLD
        DAA+LD
Subjt:  DAAYLD

AT2G29590.1 Thioesterase superfamily protein4.5e-1238.18Show/hide
Query:  MDKTKRYLEKHSD--DDRKVASVD---GLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDI
        M+K   YL+   +  DD +   V+   G    FY+NF + G+RV+ +EPG I CS KVP RL + + +L  GA A+LVD +G A +   G     VS+D+
Subjt:  MDKTKRYLEKHSD--DDRKVASVD---GLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDI

Query:  NLSYLDAAYL
        ++++L  A L
Subjt:  NLSYLDAAYL

AT3G61200.1 Thioesterase superfamily protein5.9e-0431.33Show/hide
Query:  DGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSI-DINLSYLDAA
        D   F  +        R   I  GR+ CS+ V   + N    LHGGA AS+ + +  A +KT+ S    + I ++++SYL +A
Subjt:  DGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSI-DINLSYLDAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGACAAAGAGATACTTAGAGAAGCATAGTGACGATGACCGGAAGGTTGCGTCCGTCGATGGCCTTCCTTTCAAATTTTACCAAAACTTTCTGATGACTGGTCT
TCGCGTCGATCTCATCGAACCTGGTCGCATCGTTTGCTCTCTCAAAGTCCCTGCTCGATTGCTTAACGAGAATAATTCCTTGCACGGAGGAGCCTCAGCGTCACTCGTGG
ATTGTATTGGTGCAGCAGCGATAAAGACTTTGGGCTCTACCACCACCGGAGTCTCCATCGATATTAACCTCTCCTACTTGGATGCTGCTTATCTCGACGTCAGTTCCATT
TCCCCCTTTTTCTACTTTTCAATTTTCCATTTCTCTCTATCTGATCTAATACCTCTCCACCTATTGTCCATCTAA
mRNA sequenceShow/hide mRNA sequence
GTTTTGGTGGATTGCTATTTGGTGAGTCTCAGTTTCACAGTCACAGGAGATGGATAAGACAAAGAGATACTTAGAGAAGCATAGTGACGATGACCGGAAGGTTGCGTCCG
TCGATGGCCTTCCTTTCAAATTTTACCAAAACTTTCTGATGACTGGTCTTCGCGTCGATCTCATCGAACCTGGTCGCATCGTTTGCTCTCTCAAAGTCCCTGCTCGATTG
CTTAACGAGAATAATTCCTTGCACGGAGGAGCCTCAGCGTCACTCGTGGATTGTATTGGTGCAGCAGCGATAAAGACTTTGGGCTCTACCACCACCGGAGTCTCCATCGA
TATTAACCTCTCCTACTTGGATGCTGCTTATCTCGACGTCAGTTCCATTTCCCCCTTTTTCTACTTTTCAATTTTCCATTTCTCTCTATCTGATCTAATACCTCTCCACC
TATTGTCCATCTAAATTTTAACTCTTATTACAGGAGCTTTCTATACATTACATATTCTTCTAATCTGAATAATGTAAAATTCCCCCTCCCCACTCACTCACTGGAATAAG
GGCAAAAAAAAGGCAATTCTTGG
Protein sequenceShow/hide protein sequence
MDKTKRYLEKHSDDDRKVASVDGLPFKFYQNFLMTGLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGAAAIKTLGSTTTGVSIDINLSYLDAAYLDVSSI
SPFFYFSIFHFSLSDLIPLHLLSI