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Tan0014684 (gene) of Snake gourd v1 genome

Gene IDTan0014684
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG03:37361420..37361662
RNA-Seq ExpressionTan0014684
SyntenyTan0014684
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-2576.25Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+N AVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-2576.25Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+N AVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-2576.25Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+N AVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL

XP_038876370.1 uncharacterized protein LOC120068812, partial [Benincasa hispida]1.5e-2577.22Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSF
        M+TAKEIM SLQA+FGQPSSS  +DA+K+VYN RMKEG +VREHVL+MMVHFN+ EVNRAV++E SQV FIMESLPKSF
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSF

XP_038895766.1 uncharacterized protein LOC120083930 [Benincasa hispida]3.4e-2578.21Show/hide
Query:  TAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL
        TAKEIM SL+ MF QPS S+R+DA+KYVYN RMKEGTSV+EHVLNMMVHFNV E+NRA+ID+ SQVSFI+ESL KSFL
Subjt:  TAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein3.6e-2576.25Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+N AVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL

A0A5A7TU93 Gag/pol protein3.6e-2576.25Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+N AVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL

A0A5A7TWB9 Gag/pol protein3.6e-2576.25Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+N AVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL

A0A5A7V4M1 Gag/pol protein3.6e-2576.25Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+N AVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL

A0A5D3CPJ6 Gag/pol protein3.6e-2576.25Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  +++DALKY+YN+RM EG SVREHVLNMMVHFNVAE+N AVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCGCAAAAGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCATCGGTCCGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
GGGAACATCTGTTCGGGAGCATGTCCTTAATATGATGGTCCACTTCAACGTGGCAGAGGTAAACAGGGCTGTCATTGATGAGAACAGTCAGGTTAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCACCGCAAAAGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCATCGGTCCGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
GGGAACATCTGTTCGGGAGCATGTCCTTAATATGATGGTCCACTTCAACGTGGCAGAGGTAAACAGGGCTGTCATTGATGAGAACAGTCAGGTTAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCCTCTGA
Protein sequenceShow/hide protein sequence
MITAKEIMGSLQAMFGQPSSSVRYDALKYVYNSRMKEGTSVREHVLNMMVHFNVAEVNRAVIDENSQVSFIMESLPKSFL