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Tan0014721 (gene) of Snake gourd v1 genome

Gene IDTan0014721
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationLG10:41741648..41750669
RNA-Seq ExpressionTan0014721
SyntenyTan0014721
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]6.1e-0850.68Show/hide
Query:  NEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI
        +E Q+REAQQG + RMI  +E L++R+ R E++N AR R+PPP  P    + +DN+ EG  SD L+DDQVTL+
Subjt:  NEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]5.9e-1154.76Show/hide
Query:  LVDMAQEGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA
        + ++  EG  NI++A+ REA +GT+ERMIR +E L+ERI RLE QN A  R+PPPP  R  D D EYEG  SD  EDDQ T++A
Subjt:  LVDMAQEGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA

XP_022971169.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111469948, partial [Cucurbita maxima]2.3e-0752.78Show/hide
Query:  EGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + +I +A++REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]4.7e-0854.17Show/hide
Query:  EGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + NI +A++REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]4.7e-0854.17Show/hide
Query:  EGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + NI +A++REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein2.9e-0850.68Show/hide
Query:  NEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI
        +E Q+REAQQG + RMI  +E L++R+ R E++N AR R+PPP  P    + +DN+ EG  SD L+DDQVTL+
Subjt:  NEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241152.8e-1154.76Show/hide
Query:  LVDMAQEGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA
        + ++  EG  NI++A+ REA +GT+ERMIR +E L+ERI RLE QN A  R+PPPP  R  D D EYEG  SD  EDDQ T++A
Subjt:  LVDMAQEGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699481.1e-0752.78Show/hide
Query:  EGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + +I +A++REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEAQMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATTAATCGGGTCAAAGAGTTTGATCAGTTAATCTCGTATCATTGGAGCTCGTCATTTGTAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTT
AATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGACATGGCAC
AAGAAGGTGATCTTAACATTAACGAAGCCCAAATGAGGGAGGCACAACAAGGAACCATGGAGAGAATGATTCGTGGAATAGAAGAGTTATCGGAGCGTATACGGAGGTTG
GAGGTTCAAAACCACGCTAGGAGGAGAATTCCACCCCCTCCACAACAACGTGAGGATGACCATGACAACGAATATGAGGGAGGAAGTTCTGATCAACTAGAAGATGACCA
AGTTACATTAATAGCAAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGATTAATCGGGTCAAAGAGTTTGATCAGTTAATCTCGTATCATTGGAGCTCGTCATTTGTAGGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTT
AATCACTCATATTCAAGCTATGGTGAGCTCAAAAGAGGAGGTTCTAGAAGATAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGACATGGCAC
AAGAAGGTGATCTTAACATTAACGAAGCCCAAATGAGGGAGGCACAACAAGGAACCATGGAGAGAATGATTCGTGGAATAGAAGAGTTATCGGAGCGTATACGGAGGTTG
GAGGTTCAAAACCACGCTAGGAGGAGAATTCCACCCCCTCCACAACAACGTGAGGATGACCATGACAACGAATATGAGGGAGGAAGTTCTGATCAACTAGAAGATGACCA
AGTTACATTAATAGCAAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGAGTGA
Protein sequenceShow/hide protein sequence
MLINRVKEFDQLISYHWSSSFVGPITRSRAKKLQQALITHIQAMVSSKEEVLEDNLHARVIQVVLIVPLVDMAQEGDLNINEAQMREAQQGTMERMIRGIEELSERIRRL
EVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIANLHARVIQVVLIVPLVE