CuGenDBv2

Gene ID	Tan0014769
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Genome location	LG09:23346564..23346785
RNA-Seq Expression	Tan0014769
Synteny	Tan0014769
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008234 - cysteine-type peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]

2.0e-24

78.08

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Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]

2.0e-24

78.08

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Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]

2.0e-24

78.08

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Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]

2.0e-24

78.08

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Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]

2.0e-24

78.08

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Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

9.7e-25

78.08

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Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL

A0A5A7TU93 Gag/pol protein

9.7e-25

78.08

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Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL

A0A5A7TWB9 Gag/pol protein

9.7e-25

78.08

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Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL

A0A5A7V4M1 Gag/pol protein

9.7e-25

78.08

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Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL

A0A5D3CPJ6 Gag/pol protein

9.7e-25

78.08

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Query:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL
        M+SLQEMFGQ S+Q++HD+LKY++NARM EG+SVREHVLNMM HFN+AEMNGA IDE+SQVSFILE+LP+SFL
Subjt:  MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGAGTCCTTGCAGGAAATGTTTGGACAACAGTCATTTCAGGTCCGGCATGACTCGCTCAAATACGTTTTCAACGCACGGATGAAAGAGGGCTCGTCTGTCCGTGAACA
CGTTCTAAACATGATGACCCACTTTAATCTGGCCGAGATGAACGGGGCTTCGATCGACGAGTCGAGCCAGGTCAGTTTTATTTTAGAGACTCTTCCGAAGAGTTTCCTTT
AG

mRNA sequence

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Protein sequence

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MESLQEMFGQQSFQVRHDSLKYVFNARMKEGSSVREHVLNMMTHFNLAEMNGASIDESSQVSFILETLPKSFL

Tan0014769 (gene) of Snake gourd v1 genome