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Tan0014792 (gene) of Snake gourd v1 genome

Gene IDTan0014792
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG11:21503765..21505820
RNA-Seq ExpressionTan0014792
SyntenyTan0014792
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041460.1 gag/pol protein [Cucumis melo var. makuwa]4.5e-0672.5Show/hide
Query:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQ
        AN+KA+V++LASMSD+LAKKHE + TAKEIMNS++GMF Q
Subjt:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQ

KAA0063740.1 gag/pol protein [Cucumis melo var. makuwa]2.6e-0668.18Show/hide
Query:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQ
        ANDKA++H+LASMSDIL+KKHE M+TA++IM+S++ MFEQ S Q
Subjt:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQ

XP_022151295.1 uncharacterized protein LOC111019259 [Momordica charantia]2.0e-0666.67Show/hide
Query:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA
        ANDKA+V++L S+S++LAKKHE M+TAKEIM+S+Q MF Q S+QA
Subjt:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA

XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]4.1e-0773.33Show/hide
Query:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA
        ANDKAKV++LAS+SD+LAKKHE  ITAKEIM+S+Q MF Q S+QA
Subjt:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA

XP_022154837.1 uncharacterized protein LOC111022000 [Momordica charantia]1.2e-0668.89Show/hide
Query:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA
        ANDKAKV++L+S+SD+LAKKHE  +TAKEIM+S+Q MF Q S+QA
Subjt:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA

TrEMBL top hitse value%identityAlignment
A0A5A7V970 Gag/pol protein1.3e-0668.18Show/hide
Query:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQ
        ANDKA++H+LASMSDIL+KKHE M+TA++IM+S++ MFEQ S Q
Subjt:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQ

A0A5D3DL59 Gag/pol protein2.2e-0672.5Show/hide
Query:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQ
        AN+KA+V++LASMSD+LAKKHE + TAKEIMNS++GMF Q
Subjt:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQ

A0A6J1DAT1 uncharacterized protein LOC1110192599.7e-0766.67Show/hide
Query:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA
        ANDKA+V++L S+S++LAKKHE M+TAKEIM+S+Q MF Q S+QA
Subjt:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA

A0A6J1DFZ2 uncharacterized protein LOC1110200952.0e-0773.33Show/hide
Query:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA
        ANDKAKV++LAS+SD+LAKKHE  ITAKEIM+S+Q MF Q S+QA
Subjt:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA

A0A6J1DMS3 uncharacterized protein LOC1110220005.7e-0768.89Show/hide
Query:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA
        ANDKAKV++L+S+SD+LAKKHE  +TAKEIM+S+Q MF Q S+QA
Subjt:  ANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCCATGTCCGCATATGGTGCAATGCGGCGTTAACGCTGTGCTTGCTTGGGAGAAAGCGCGCACAGAGTCGAGTGTTGTTGTAACGCAGCCTCTAGCGTTGCA
ACGCTCGCGAAGACGACAAAAAAGCGTTGTAACGCCAAAGGCGTTTCACGCCAATGATAAGGCCAAGGTCCACATGCTGGCAAGTATGTCTGACATATTAGCCAAGAAGC
ATGAGGGCATGATTACCGCCAAGGAAATCATGAATTCTGTGCAGGGTATGTTTGAACAACAGTCCACACAAGCCGACATAATGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCCATGTCCGCATATGGTGCAATGCGGCGTTAACGCTGTGCTTGCTTGGGAGAAAGCGCGCACAGAGTCGAGTGTTGTTGTAACGCAGCCTCTAGCGTTGCA
ACGCTCGCGAAGACGACAAAAAAGCGTTGTAACGCCAAAGGCGTTTCACGCCAATGATAAGGCCAAGGTCCACATGCTGGCAAGTATGTCTGACATATTAGCCAAGAAGC
ATGAGGGCATGATTACCGCCAAGGAAATCATGAATTCTGTGCAGGGTATGTTTGAACAACAGTCCACACAAGCCGACATAATGCCCTAA
Protein sequenceShow/hide protein sequence
MGIPCPHMVQCGVNAVLAWEKARTESSVVVTQPLALQRSRRRQKSVVTPKAFHANDKAKVHMLASMSDILAKKHEGMITAKEIMNSVQGMFEQQSTQADIMP