; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0014797 (gene) of Snake gourd v1 genome

Gene IDTan0014797
OrganismTrichosanthes anguina (Snake gourd v1)
Description40S ribosomal protein S20
Genome locationLG01:3076253..3078050
RNA-Seq ExpressionTan0014797
SyntenyTan0014797
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001848 - Ribosomal protein S10
IPR005729 - Ribosomal protein S10, eukaryotic/archaeal
IPR018268 - Ribosomal protein S10, conserved site
IPR027486 - Ribosomal protein S10 domain
IPR036838 - Ribosomal protein S10 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576788.1 40S ribosomal protein S20-2, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5998.36Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAYAAMKPTK GLEDTQ+QIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

KAG6600158.1 Glutathione S-transferase U17, partial [Cucurbita argyrosperma subsp. sororia]2.2e-6099.18Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAYAAMKPTKPGLEDTQ+QIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

XP_008439109.1 PREDICTED: 40S ribosomal protein S20-2-like [Cucumis melo]2.2e-6099.18Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAYAAMKPTKPGLEDTQ+QIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

XP_022922646.1 40S ribosomal protein S20-2-like isoform X1 [Cucurbita moschata]1.9e-5998.36Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAYAAMKPTK GLEDTQ+QIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

XP_022985516.1 40S ribosomal protein S20-2-like [Cucurbita maxima]1.9e-5998.36Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAYAAMKPTK GLEDTQ+QIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

TrEMBL top hitse value%identityAlignment
A0A1S3AXJ9 40S ribosomal protein S20-2-like1.1e-6099.18Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAYAAMKPTKPGLEDTQ+QIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

A0A5A7VKH9 40S ribosomal protein S20-2-like1.1e-6099.18Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAYAAMKPTKPGLEDTQ+QIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

A0A6J1FSX5 40S ribosomal protein S20-2-like1.1e-6099.18Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAYAAMKPTKPGLEDTQ+QIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

A0A6J1IAH1 40S ribosomal protein S20-2-like1.1e-6099.18Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAYAAMKPTKPGLEDTQ+QIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

A0A6J1J8F7 40S ribosomal protein S20-2-like9.1e-6098.36Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAYAAMKPTK GLEDTQ+QIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

SwissProt top hitse value%identityAlignment
P23403 40S ribosomal protein S206.3e-4274.77Show/hide
Query:  DTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVE
        D +  IH+IRITL+S+NVK+LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL S +++VKQITSI+IEPGVE
Subjt:  DTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVE

Query:  VEVTIAD
        VEVTIAD
Subjt:  VEVTIAD

P35686 40S ribosomal protein S201.7e-5082.93Show/hide
Query:  MAYA-AMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSAD
        +AYA  MK  K G E +Q+  H+IRITLSSK+VKNLEKVC DLV+GAKDK L+VKGPVRMPTKVLHITTRKSPCGEGTNTWDRFE+RVHKRVIDL SSAD
Subjt:  MAYA-AMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSAD

Query:  VVKQITSITIEPGVEVEVTIADQ
        VVKQITSITIEPGVEVEVTI+DQ
Subjt:  VVKQITSITIEPGVEVEVTIADQ

P49200 40S ribosomal protein S20-11.1e-5490Show/hide
Query:  AYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVV
        AY  MKP K GLE+  +QIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVV
Subjt:  AYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVV

Query:  KQITSITIEPGVEVEVTIAD
        KQITSITIEPGVEVEVTIAD
Subjt:  KQITSITIEPGVEVEVTIAD

Q3ZBH8 40S ribosomal protein S208.2e-4270.09Show/hide
Query:  AMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQI
        A K T     + +  IH+IRITL+S+NVK+LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL S +++VKQI
Subjt:  AMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQI

Query:  TSITIEPGVEVEVTIAD
        TSI+IEPGVEVEVTIAD
Subjt:  TSITIEPGVEVEVTIAD

Q9STY6 40S ribosomal protein S20-21.0e-5590.91Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAY  MKPTK GLE   +QIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIAD
        VKQITSITIEPGVEVEVTIAD
Subjt:  VKQITSITIEPGVEVEVTIAD

Arabidopsis top hitse value%identityAlignment
AT3G45030.1 Ribosomal protein S10p/S20e family protein7.9e-5690Show/hide
Query:  AYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVV
        AY  MKP K GLE+  +QIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVV
Subjt:  AYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVV

Query:  KQITSITIEPGVEVEVTIAD
        KQITSITIEPGVEVEVTIAD
Subjt:  KQITSITIEPGVEVEVTIAD

AT3G47370.1 Ribosomal protein S10p/S20e family protein7.1e-5790.91Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAY  MKPTK GLE   +QIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIAD
        VKQITSITIEPGVEVEVTIAD
Subjt:  VKQITSITIEPGVEVEVTIAD

AT3G47370.2 Ribosomal protein S10p/S20e family protein7.1e-5790.91Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAY  MKPTK GLE   +QIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIAD
        VKQITSITIEPGVEVEVTIAD
Subjt:  VKQITSITIEPGVEVEVTIAD

AT3G47370.3 Ribosomal protein S10p/S20e family protein7.1e-5790.91Show/hide
Query:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        MAY  MKPTK GLE   +QIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DV
Subjt:  MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIAD
        VKQITSITIEPGVEVEVTIAD
Subjt:  VKQITSITIEPGVEVEVTIAD

AT5G62300.1 Ribosomal protein S10p/S20e family protein7.9e-5690Show/hide
Query:  AYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVV
        AY  MKP K GLE+  +QIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVV
Subjt:  AYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVV

Query:  KQITSITIEPGVEVEVTIAD
        KQITSITIEPGVEVEVTIAD
Subjt:  KQITSITIEPGVEVEVTIAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTACGCTGCAATGAAACCAACTAAGCCAGGCTTAGAAGATACGCAGGACCAAATCCATAAGATTAGGATTACTCTCTCATCCAAAAATGTTAAGAACCTTGAGAA
AGTTTGCGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAGGGACCTGTAAGAATGCCTACTAAGGTGCTTCACATTACAACTAGAAAATCTCCATGTG
GTGAAGGTACCAACACATGGGACAGATTTGAGCTTCGCGTTCACAAGCGAGTTATTGACTTATTCAGCTCTGCAGATGTAGTGAAGCAGATTACCTCCATCACCATTGAG
CCTGGTGTGGAGGTTGAGGTCACCATTGCCGATCAATGA
mRNA sequenceShow/hide mRNA sequence
GAATCATATAAATTGTAGCGTTGTCACTCTCGTTCTCCTTCTTTCAAAGAGAGGCAGCTGGAACTGGATACTCAATCGTAGAGATCTCCTTCTCACCCGCCATCCCAGAT
CCGTTTTGGAGATTTAGGATAACCCGAAGTATGGCGTACGCTGCAATGAAACCAACTAAGCCAGGCTTAGAAGATACGCAGGACCAAATCCATAAGATTAGGATTACTCT
CTCATCCAAAAATGTTAAGAACCTTGAGAAAGTTTGCGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAGGGACCTGTAAGAATGCCTACTAAGGTGC
TTCACATTACAACTAGAAAATCTCCATGTGGTGAAGGTACCAACACATGGGACAGATTTGAGCTTCGCGTTCACAAGCGAGTTATTGACTTATTCAGCTCTGCAGATGTA
GTGAAGCAGATTACCTCCATCACCATTGAGCCTGGTGTGGAGGTTGAGGTCACCATTGCCGATCAATGAAATGCAATGTTTTCATGTTTTTGCCTATTTTTAGTCTCATT
AGACAGTTGTTACTTTTTGGGGTTTACAACATACCTGTGTCAGGTCTGTGGGGTTTAAATGCAATAGTTGTTCCCATTACATGTTGAAATTAACGACATTCAGAGAGTTT
TCTATTCCTGGCAATTTTCTTGCGTTAGAACACTATGTTAATTTCATTATCTCATGCAGATTTTGTATCTACACTAATGCGTCAATTCTCTGCCCTAGTTGAGGTTTTAA
TACGCAGTGTGCCTAAATCCAG
Protein sequenceShow/hide protein sequence
MAYAAMKPTKPGLEDTQDQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIE
PGVEVEVTIADQ