; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0014818 (gene) of Snake gourd v1 genome

Gene IDTan0014818
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionribosome production factor 1
Genome locationLG10:52296852..52313986
RNA-Seq ExpressionTan0014818
SyntenyTan0014818
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]3.0e-17695.18Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKN+ IIPSMIKNKEKRAEVHANLK+QK+LEKRKRAKARDAAEKQALELGEE PPRK P TIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL

XP_022943997.1 ribosome production factor 1 [Cucurbita moschata]1.3e-17493.67Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNRD++PSMIKNKEKRAEVHANLKNQK+LEKRKRAKARDAAEKQALELGEEPPPRKTP TIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ++PKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSL+VVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         HEPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKE D+K+KSKD KGEK SQ KVVARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
        ISLQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL

XP_022971273.1 ribosome production factor 1 [Cucurbita maxima]9.6e-17593.98Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNRD+IPSMIKNKEKRAEVHANLKNQK+LEKRKRAKARDAAEKQALELGEEPPPRKTP TIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ++PKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSL+VVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         HEPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKE D+K+KSKD KGEK SQ KVVARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
        ISLQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]1.1e-17393.37Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKN+ I+PS IKNKEKRAEVHANLK+QK+LEKRKRAKARDAAEKQALELGEE PPRK P TIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSK TKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]2.5e-17594.28Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEE KNR IIPSMIKNKEKRAEVHANLKNQK+LEKRKRAKARDAAEKQALELGEE PPRK P TIENTREVDET+CKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
        SH+PELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein5.2e-17493.37Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKN+ I+PS IKNKEKRAEVHANLK+QK+LEKRKRAKARDAAEKQALELGEE PPRK P TIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSK TKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL

A0A1S3B854 ribosome production factor 1 isoform X11.4e-17695.18Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKN+ IIPSMIKNKEKRAEVHANLK+QK+LEKRKRAKARDAAEKQALELGEE PPRK P TIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL

A0A5A7UHC7 Ribosome production factor 1 isoform X11.4e-17695.18Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKN+ IIPSMIKNKEKRAEVHANLK+QK+LEKRKRAKARDAAEKQALELGEE PPRK P TIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        +LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFE KENKKEAD+K KSKDTKGEKV QQKV+ARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL

A0A6J1FUK1 ribosome production factor 16.1e-17593.67Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNRD++PSMIKNKEKRAEVHANLKNQK+LEKRKRAKARDAAEKQALELGEEPPPRKTP TIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ++PKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSL+VVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         HEPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKE D+K+KSKD KGEK SQ KVVARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
        ISLQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL

A0A6J1I6C8 ribosome production factor 14.7e-17593.98Show/hide
Query:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNRD+IPSMIKNKEKRAEVHANLKNQK+LEKRKRAKARDAAEKQALELGEEPPPRKTP TIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ++PKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANA+DFTSL+VVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  LLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL
         HEPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKE D+K+KSKD KGEK SQ KVVARLQECGPRFTMKL
Subjt:  SHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
        ISLQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 12.1e-7148.76Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDLLPKVLITTCRF
        S IKNKE+R  +    K Q+R EK     A+   +K+   LG++ PP+  P TI+N R  DET   P+DEE+      DEF+S   +   PK+LITT   
Subjt:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDLLPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF                       S++KV   +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEFEWVHKP-EMDTSRRRFFL
         GE+EWVHKP EMDTSRR+F L
Subjt:  GGEFEWVHKP-EMDTSRRRFFL

Q6IQU6 Ribosome production factor 13.9e-7048.76Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDLLPKVLITTCRF
        S IKNK++R  +   LK +KR +KR   K +   E++AL+  ++ PP++ P TIEN R  DET   P+DEE+      DEFS+   R   PKVLITT   
Subjt:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDLLPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GRL  +LFP DP F GR+V TFHNQRDFIFFR HRYIF  K  KK                        +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEFEWVHK-PEMDTSRRRFFL
         GE+EWVHK  EMD+SRR+F L
Subjt:  GGEFEWVHK-PEMDTSRRRFFL

Q7TND5 Ribosome production factor 14.6e-7148.45Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDLLPKVLITTCRF
        S IKNK++R  +    K Q+R EK     A+   +K+   LG++ PP+  P TI+N R  DET   P+DEE+      DEF+S   R   PK+LITT   
Subjt:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDLLPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIP++H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF+                      S++KV   +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEFEWVHKP-EMDTSRRRFFL
         GE+EWVHKP EMDTSRR+F L
Subjt:  GGEFEWVHKP-EMDTSRRRFFL

Q8AVP1 Ribosome production factor 11.2e-7148.16Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEK----RKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDLLPKVLIT
        S IKNK++R  +   LK +KR EK    +KR K R+A       LG++ PP+  P TIEN R  DET   P DEE+      DEF+    +   PK+LIT
Subjt:  SMIKNKEKRAEVHANLKNQKRLEK----RKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDLLPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV
        T          F  +L S+IPN+  Y R    LKKII    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SL+P DP+F GR+V TFHNQRD+IFFR+HRY+F+                      S++KV   +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEFEWVHK-PEMDTSRRRFFL
        FDSK GE+EWVHK  EMDTSRR+F L
Subjt:  FDSKGGEFEWVHK-PEMDTSRRRFFL

Q9H9Y2 Ribosome production factor 14.6e-7148.45Show/hide
Query:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDLLPKVLITTCRF
        S IKNK++R  +    K Q+R EK     A+   +K+   LG++ PP+  P TI+N R  DET   P+DEE+      DEF+S   +   PK+LITT   
Subjt:  SMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDLLPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF                       S++KV   +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEFEWVHKP-EMDTSRRRFFL
         GE+EWVHKP EMDTSRR+F L
Subjt:  GGEFEWVHKP-EMDTSRRRFFL

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein4.8e-3938.78Show/hide
Query:  DEFSSIIKRDLLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLR
        DE+++  + D  PK+L+TT R  S     F  EL  V PN+    RG+  + +IIE A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R
Subjt:  DEFSSIIKRDLLPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLR

Query:  KDI---KNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVA
         DI   K+ G      P L+  NFTT++G RVG +++ +FP  P    +R+VTF NQ D+I FR+H Y      +K E   KS                 
Subjt:  KDI---KNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVA

Query:  RLQECGPRFTMKLISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
         L+E GPRF ++L  ++ GT +    E EWV +P M+TS++R F+
Subjt:  RLQECGPRFTMKLISLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL

AT4G01560.1 Ribosomal RNA processing Brix domain protein5.9e-13873.11Show/hide
Query:  GEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDL
        G EK+N  I+PSMIKNK+KR++V+A  K++K+LEK+K+ +ARDAAEK+ALELGEEPP +  P TIENTRE DETVC+PDDEELFA  DADEF+ +++R++
Subjt:  GEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDL

Query:  LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS
         PKVL+TTCRFNST GPA ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRKDIKNHGNPTS
Subjt:  LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS

Query:  HEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLI
        H+PELVL NFTTRLG RVGR  QSLFP DPNFRGRRVVTFHNQRDFIFFRHHRYIFE             +K++K +K  ++ +  RLQECGPRFT+KL+
Subjt:  HEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLI

Query:  SLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL
        +LQHGTFD+KGGEFEWVHKPEMDTSRRRFFL
Subjt:  SLQHGTFDSKGGEFEWVHKPEMDTSRRRFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGGAGAAGAAGAACAGGGATATAATCCCATCAATGATAAAGAACAAGGAAAAGAGGGCAGAAGTGCATGCCAACCTTAAGAACCAGAAGAGGCTTGAGAAGCG
CAAGAGAGCCAAGGCTCGTGATGCTGCTGAGAAACAAGCTCTTGAACTTGGAGAAGAACCTCCTCCTAGGAAGACTCCTCACACCATTGAGAACACGAGGGAGGTTGATG
AGACAGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTCCATCATAAAGCGAGACTTGTTGCCAAAAGTTCTAATTACTACTTGT
CGGTTTAATTCTACTATTGGACCTGCTTTTATATCAGAGTTGCTTTCAGTGATACCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATAGAATA
TGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAGAAAATTGGATGGCCTTCTAATTATTGGCTTACCTGAGGGTCCTACTGCTCATTTTAAGA
TATCAAATGTTGTCTTACGTAAGGATATTAAGAATCATGGAAATCCAACCAGCCATGAGCCGGAGCTTGTATTGACTAACTTCACAACACGCCTTGGTCTTCGTGTTGGA
AGATTAATACAGTCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGAGTTGTGACATTTCACAATCAACGGGATTTTATATTCTTCCGGCATCATCGATACATTTT
TGAAGGCAAGGAGAACAAAAAAGAGGCCGACACAAAAAGTAAGTCCAAGGATACTAAGGGTGAGAAAGTTTCTCAGCAGAAAGTAGTTGCACGGCTTCAGGAATGTGGTC
CTCGTTTCACAATGAAATTGATCAGTTTGCAGCACGGAACTTTCGATTCCAAAGGCGGGGAATTTGAGTGGGTTCATAAGCCTGAAATGGATACAAGCCGTAGAAGATTT
TTCTTATGA
mRNA sequenceShow/hide mRNA sequence
AATTTTTAGAATTTCTCTTTCATCTTCCTCTTCACTCTCACCGCCAGGTTCCTCTTGTTCACGCCGTTTCCTCCTCCCTCTCAGCAGTCCAGTGTCGCGCCGCCTCTCGT
TCAGTTCTACCGACGCCGTCTTTCTTCCGCTCATGCCGCCGTAGCCCCCCTCGAGTTTTCATTCTCTAGTTGTTACTGGTTGATCAAGGAGTATAGATGGGAGAGGAGAA
GAAGAACAGGGATATAATCCCATCAATGATAAAGAACAAGGAAAAGAGGGCAGAAGTGCATGCCAACCTTAAGAACCAGAAGAGGCTTGAGAAGCGCAAGAGAGCCAAGG
CTCGTGATGCTGCTGAGAAACAAGCTCTTGAACTTGGAGAAGAACCTCCTCCTAGGAAGACTCCTCACACCATTGAGAACACGAGGGAGGTTGATGAGACAGTTTGCAAA
CCTGATGATGAAGAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTCCATCATAAAGCGAGACTTGTTGCCAAAAGTTCTAATTACTACTTGTCGGTTTAATTCTAC
TATTGGACCTGCTTTTATATCAGAGTTGCTTTCAGTGATACCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATAGAATATGCAAATGCCAAGG
ACTTCACTTCTTTGATGGTTGTTCATACGAGTAGGAGAAAATTGGATGGCCTTCTAATTATTGGCTTACCTGAGGGTCCTACTGCTCATTTTAAGATATCAAATGTTGTC
TTACGTAAGGATATTAAGAATCATGGAAATCCAACCAGCCATGAGCCGGAGCTTGTATTGACTAACTTCACAACACGCCTTGGTCTTCGTGTTGGAAGATTAATACAGTC
ACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGAGTTGTGACATTTCACAATCAACGGGATTTTATATTCTTCCGGCATCATCGATACATTTTTGAAGGCAAGGAGA
ACAAAAAAGAGGCCGACACAAAAAGTAAGTCCAAGGATACTAAGGGTGAGAAAGTTTCTCAGCAGAAAGTAGTTGCACGGCTTCAGGAATGTGGTCCTCGTTTCACAATG
AAATTGATCAGTTTGCAGCACGGAACTTTCGATTCCAAAGGCGGGGAATTTGAGTGGGTTCATAAGCCTGAAATGGATACAAGCCGTAGAAGATTTTTCTTATGACATTC
TCAATGGACTTCATTACTTCTATTCCCGGGGTGTAAAAGTCAGGTTTATATAATATCATGGGCGGATCGTTGATCAAATATCAATCTCTTTTTTGGCGTTGTATTTTAGA
AGTTCATTTACTTTTGACTATTCAAAATTTTGTAGCATTGTCTTTAAACTTGAGTTTTGCTTTAGAGGTATAAATGTATCGTCATTTGCAACCTTTTGGAAAGTATTTCT
CGTAGCTGACAACTAAAAAGAAAAAAAAACCATATATTCGTTCTCTTATCTTATCTGGGGGGCTTTAAAAGTGCCAAGATTCACAAACTTTGAGAATGCTAATTGGCATG
TGAGGACCTAGTTTAATAGTCTTCTACAGTTTTGATTTTGTGTTTAGCAGTCCTTTGATCTATTGATCTATTTGATACACAGTTGAGAGTCCAAGGAATTGTGAACCACT
TTAAAGCACAAGAATTTATTAGATACACTGCTAAAAA
Protein sequenceShow/hide protein sequence
MGEEKKNRDIIPSMIKNKEKRAEVHANLKNQKRLEKRKRAKARDAAEKQALELGEEPPPRKTPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDLLPKVLITTC
RFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVG
RLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFEGKENKKEADTKSKSKDTKGEKVSQQKVVARLQECGPRFTMKLISLQHGTFDSKGGEFEWVHKPEMDTSRRRF
FL