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Tan0014851 (gene) of Snake gourd v1 genome

Gene IDTan0014851
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUbiquitin-conjugating enzyme, E2
Genome locationLG01:114264329..114267180
RNA-Seq ExpressionTan0014851
SyntenyTan0014851
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006281 - DNA repair (biological process)
GO:0016574 - histone ubiquitination (biological process)
GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0000166 - nucleotide binding (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6750810.1 hypothetical protein POTOM_045325 [Populus tomentosa]3.0e-2962.07Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSF-----------------FFLLADDTPRE--------ELTEDYPNKPPTVRFVS
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFGY   F                 FF   DDTP +        + TEDYPNKPPTVRFVS
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSF-----------------FFLLADDTPRE--------ELTEDYPNKPPTVRFVS

Query:  RMFHPNIYADGSISVN
        RMFHPNIYADGSI ++
Subjt:  RMFHPNIYADGSISVN

OMO70397.1 Ubiquitin-conjugating enzyme, E2 [Corchorus olitorius]1.5e-2861.29Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYN----LSF-FFLL--------------------ADDTPRE--------ELTEDYPNK
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFGY+    LSF FFLL                     DDTP +        + TEDYPNK
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYN----LSF-FFLL--------------------ADDTPRE--------ELTEDYPNK

Query:  PPTVRFVSRMFHPNIYADGSISVN
        PPTVRFVSRMFHPNIYADGSI ++
Subjt:  PPTVRFVSRMFHPNIYADGSISVN

PSS01680.1 Ubiquitin-conjugating enzyme E2 [Actinidia chinensis var. chinensis]2.5e-2868.69Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFG          DDTP +        ++TEDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

VDD56060.1 unnamed protein product [Brassica oleracea]8.7e-2968.69Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFGY+        DDTP +        + +EDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

XP_008675722.1 uncharacterized protein LOC100192052 isoform X1 [Zea mays]1.8e-2969Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFF-LLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAP DNNIMLWN VIFGY  ++F  +  DDTP +        + TEDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFF-LLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

TrEMBL top hitse value%identityAlignment
A0A0D3DPN8 Uncharacterized protein4.2e-2968.69Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFGY+        DDTP +        + +EDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

A0A1D6L7C0 Ubiquitin-conjugating enzyme E2 28.5e-3069Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFF-LLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAP DNNIMLWN VIFGY  ++F  +  DDTP +        + TEDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFF-LLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

A0A1R3HJ73 Ubiquitin-conjugating enzyme, E27.2e-2961.29Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYN----LSF-FFLL--------------------ADDTPRE--------ELTEDYPNK
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFGY+    LSF FFLL                     DDTP +        + TEDYPNK
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYN----LSF-FFLL--------------------ADDTPRE--------ELTEDYPNK

Query:  PPTVRFVSRMFHPNIYADGSISVN
        PPTVRFVSRMFHPNIYADGSI ++
Subjt:  PPTVRFVSRMFHPNIYADGSISVN

A0A2R6Q494 Ubiquitin-conjugating enzyme E21.2e-2868.69Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFG          DDTP +        ++TEDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

A0A3P6FUI3 Uncharacterized protein4.2e-2968.69Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFGY+        DDTP +        + +EDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

SwissProt top hitse value%identityAlignment
P25153 Ubiquitin-conjugating enzyme E2-17 kDa1.3e-2760.61Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQ+DPP G+ GAP DNNIM+WN VIFG           DTP E        E TE+YPNKPPTVRFVS++FHPN+YADG I ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

P25865 Ubiquitin-conjugating enzyme E2 11.7e-3067.68Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFG          DDTP +        + +EDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

P25866 Ubiquitin-conjugating enzyme E2 21.1e-2966.67Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAP DNNI LWN VIFG          DDTP +        + TEDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

P35130 Ubiquitin-conjugating enzyme E2 26.3e-3066.67Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQ DPP GI GAPQDNNIMLWN VIFG          DDTP +        + +EDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

P42745 Ubiquitin-conjugating enzyme E2 21.7e-3067.68Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFG          DDTP +        + +EDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

Arabidopsis top hitse value%identityAlignment
AT1G14400.1 ubiquitin carrier protein 11.2e-3167.68Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFG          DDTP +        + +EDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

AT1G14400.2 ubiquitin carrier protein 11.2e-3167.68Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFG          DDTP +        + +EDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

AT2G02760.1 ubiquiting-conjugating enzyme 21.2e-3167.68Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        MSTP R RLMR FKRLQQDPP GI GAPQDNNIMLWN VIFG          DDTP +        + +EDYPNKPPTVRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN

AT2G16740.1 ubiquitin-conjugating enzyme 291.6e-0936.89Show/hide
Query:  RLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFF----FLLADDTPREELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN--KNQICSSVIT
        R+++  K LQ+DPPV     P   ++  W   I G N S +    FL+    P      DYP KPP V F +++FHPNI ++G+I ++  K+Q  S  +T
Subjt:  RLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFF----FLLADDTPREELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN--KNQICSSVIT

Query:  IIK
        I K
Subjt:  IIK

AT5G62540.1 ubiquitin-conjugating enzyme 36.0e-2861.62Show/hide
Query:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN
        M+TP + RLM  FKRLQ+DPPVGI GAPQDNNIM WN +IFG          +DTP +          TEDYPNKPP VRFVSRMFHPNIYADGSI ++
Subjt:  MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPRE--------ELTEDYPNKPPTVRFVSRMFHPNIYADGSISVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTCCTCCGAGGAATAGACTCATGAGATATTTCAAGAGGTTGCAACAAGATCCACCTGTCGGCATCCGTGGTGCTCCCCAAGACAATAATATCATGCTATGGAA
TGTTGTTATATTTGGGTATAACCTTTCTTTTTTTTTCTTATTAGCAGATGATACACCTCGGGAGGAGCTCACTGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTG
TGTCTAGAATGTTCCATCCTAACATTTATGCTGATGGAAGCATTTCTGTCAATAAAAACCAAATTTGTAGTAGTGTAATAACAATAATAAAAAAAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTCCTCCGAGGAATAGACTCATGAGATATTTCAAGAGGTTGCAACAAGATCCACCTGTCGGCATCCGTGGTGCTCCCCAAGACAATAATATCATGCTATGGAA
TGTTGTTATATTTGGGTATAACCTTTCTTTTTTTTTCTTATTAGCAGATGATACACCTCGGGAGGAGCTCACTGAGGATTATCCAAATAAGCCACCGACAGTTCGCTTTG
TGTCTAGAATGTTCCATCCTAACATTTATGCTGATGGAAGCATTTCTGTCAATAAAAACCAAATTTGTAGTAGTGTAATAACAATAATAAAAAAAATTTAG
Protein sequenceShow/hide protein sequence
MSTPPRNRLMRYFKRLQQDPPVGIRGAPQDNNIMLWNVVIFGYNLSFFFLLADDTPREELTEDYPNKPPTVRFVSRMFHPNIYADGSISVNKNQICSSVITIIKKI